data_K3I
# 
_chem_comp.id                                    K3I 
_chem_comp.name                                  Zeaxanthin 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C40 H56 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         zeaxanthin 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-18 
_chem_comp.pdbx_modified_date                    2023-03-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        568.871 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     K3I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZVR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
K3I C6  C1  C 0 1 N N N 18.336 -9.565  16.362 9.939   -1.018 0.126  C6  K3I 1  
K3I C17 C2  C 0 1 N N N 16.731 -8.847  18.127 10.324  -1.740 -2.207 C17 K3I 2  
K3I C4  C3  C 0 1 N N N 20.489 -10.180 17.460 10.675  -3.050 1.364  C4  K3I 3  
K3I C3  C4  C 0 1 N N S 19.749 -10.072 18.781 11.416  -3.404 0.073  C3  K3I 4  
K3I O3  O1  O 0 1 N N N 20.449 -10.804 19.780 12.417  -4.386 0.348  O3  K3I 5  
K3I C2  C5  C 0 1 N N N 18.354 -10.655 18.661 12.077  -2.133 -0.473 C2  K3I 6  
K3I C1  C6  C 0 1 N N N 17.504 -10.035 17.549 10.979  -1.177 -0.944 C1  K3I 7  
K3I C5  C7  C 0 1 N N N 19.633 -9.926  16.251 9.802   -1.849 1.146  C5  K3I 8  
K3I C18 C8  C 0 1 N N N 20.355 -10.108 14.946 8.707   -1.574 2.145  C18 K3I 9  
K3I C16 C9  C 0 1 N N N 16.497 -11.099 17.108 11.597  0.186  -1.258 C16 K3I 10 
K3I C7  C10 C 0 1 N N N 17.721 -8.694  15.383 9.058   0.090  0.043  C7  K3I 11 
K3I C8  C11 C 0 1 N N N 17.195 -9.024  14.166 7.714   -0.111 0.015  C8  K3I 12 
K3I C9  C12 C 0 1 N N N 16.536 -8.144  13.293 6.838   0.987  0.050  C9  K3I 13 
K3I C19 C13 C 0 1 N N N 16.350 -6.713  13.645 7.389   2.388  0.118  C19 K3I 14 
K3I C10 C14 C 0 1 N N N 16.013 -8.569  12.057 5.488   0.785  0.022  C10 K3I 15 
K3I C11 C15 C 0 1 N N N 15.296 -7.850  11.116 4.615   1.881  0.056  C11 K3I 16 
K3I C12 C16 C 0 1 N N N 14.814 -8.337  9.914  3.253   1.677  0.028  C12 K3I 17 
K3I C13 C17 C 0 1 N N N 14.241 -7.634  8.842  2.381   2.771  0.062  C13 K3I 18 
K3I C20 C18 C 0 1 N N N 14.418 -6.162  8.788  2.932   4.172  0.130  C20 K3I 19 
K3I C14 C19 C 0 1 N N N 13.479 -8.251  7.837  1.018   2.567  0.034  C14 K3I 20 
K3I H2  H2  H 0 1 N N N 16.129 -9.183  18.984 9.550   -1.055 -2.551 H2  K3I 21 
K3I H3  H3  H 0 1 N N N 17.440 -8.074  18.457 11.078  -1.857 -2.986 H3  K3I 22 
K3I H4  H4  H 0 1 N N N 16.068 -8.430  17.354 9.879   -2.710 -1.985 H4  K3I 23 
K3I H5  H5  H 0 1 N N N 20.906 -11.195 17.380 10.057  -3.895 1.669  H5  K3I 24 
K3I H6  H6  H 0 1 N N N 21.308 -9.446  17.463 11.399  -2.830 2.148  H6  K3I 25 
K3I H7  H7  H 0 1 N N N 19.673 -9.012  19.065 10.710  -3.796 -0.659 H7  K3I 26 
K3I H8  H8  H 0 1 N N N 19.985 -10.736 20.606 12.069  -5.212 0.711  H8  K3I 27 
K3I H9  H9  H 0 1 N N N 17.834 -10.502 19.618 12.663  -1.658 0.314  H9  K3I 28 
K3I H10 H10 H 0 1 N N N 18.447 -11.733 18.463 12.727  -2.389 -1.310 H10 K3I 29 
K3I H12 H12 H 0 1 N N N 21.397 -10.402 15.141 7.811   -2.126 1.862  H12 K3I 30 
K3I H13 H13 H 0 1 N N N 19.856 -10.892 14.358 9.032   -1.891 3.136  H13 K3I 31 
K3I H14 H14 H 0 1 N N N 20.340 -9.163  14.384 8.488   -0.507 2.159  H14 K3I 32 
K3I H15 H15 H 0 1 N N N 15.906 -11.427 17.976 12.129  0.555  -0.381 H15 K3I 33 
K3I H16 H16 H 0 1 N N N 15.826 -10.675 16.346 12.295  0.086  -2.090 H16 K3I 34 
K3I H17 H17 H 0 1 N N N 17.035 -11.960 16.685 10.809  0.890  -1.527 H17 K3I 35 
K3I H18 H18 H 0 1 N N N 17.672 -7.648  15.649 9.455   1.094  0.002  H18 K3I 36 
K3I H19 H19 H 0 1 N N N 17.295 -10.051 13.848 7.319   -1.115 -0.034 H19 K3I 37 
K3I H20 H20 H 0 1 N N N 16.802 -6.515  14.628 7.537   2.770  -0.893 H20 K3I 38 
K3I H21 H21 H 0 1 N N N 16.835 -6.083  12.885 6.686   3.030  0.649  H21 K3I 39 
K3I H22 H22 H 0 1 N N N 15.275 -6.481  13.682 8.343   2.379  0.645  H22 K3I 40 
K3I H23 H23 H 0 1 N N N 16.197 -9.603  11.807 5.094   -0.219 -0.027 H23 K3I 41 
K3I H24 H24 H 0 1 N N N 15.094 -6.813  11.341 5.010   2.885  0.105  H24 K3I 42 
K3I H25 H25 H 0 1 N N N 14.889 -9.406  9.782  2.858   0.673  -0.021 H25 K3I 43 
K3I H27 H27 H 0 1 N N N 15.034 -5.835  9.638  3.079   4.554  -0.880 H27 K3I 44 
K3I H28 H28 H 0 1 N N N 14.916 -5.887  7.847  2.229   4.813  0.662  H28 K3I 45 
K3I H29 H29 H 0 1 N N N 13.434 -5.672  8.839  3.885   4.162  0.658  H29 K3I 46 
K3I H30 H30 H 0 1 N N N 13.725 -9.258  7.535  0.623   1.563  -0.015 H30 K3I 47 
K3I C15 C20 C 0 1 N N N ?      ?       ?      0.146   3.660  0.068  C15 K3I 48 
K3I C21 C21 C 0 1 N N N ?      ?       ?      -1.218  3.456  0.040  C21 K3I 49 
K3I C22 C22 C 0 1 N N N ?      ?       ?      -2.089  4.549  0.074  C22 K3I 50 
K3I C23 C23 C 0 1 N N N ?      ?       ?      -3.452  4.345  0.046  C23 K3I 51 
K3I C24 C24 C 0 1 N N N ?      ?       ?      -4.392  5.523  0.083  C24 K3I 52 
K3I C25 C25 C 0 1 N N N ?      ?       ?      -3.964  3.044  -0.017 C25 K3I 53 
K3I C26 C26 C 0 1 N N N ?      ?       ?      -5.326  2.840  -0.046 C26 K3I 54 
K3I C27 C27 C 0 1 N N N ?      ?       ?      -5.838  1.537  -0.109 C27 K3I 55 
K3I C28 C28 C 0 1 N N N ?      ?       ?      -7.188  1.335  -0.137 C28 K3I 56 
K3I C29 C29 C 0 1 N N N ?      ?       ?      -7.702  0.028  -0.200 C29 K3I 57 
K3I C30 C30 C 0 1 N N N ?      ?       ?      -8.127  2.513  -0.100 C30 K3I 58 
K3I C31 C31 C 0 1 N N N ?      ?       ?      -9.046  -0.173 -0.228 C31 K3I 59 
K3I C32 C32 C 0 1 N N N ?      ?       ?      -9.565  -1.492 -0.222 C32 K3I 60 
K3I C33 C33 C 0 1 N N N ?      ?       ?      -9.190  -2.315 -1.187 C33 K3I 61 
K3I C34 C34 C 0 1 N N N ?      ?       ?      -9.669  -3.733 -1.306 C34 K3I 62 
K3I C35 C35 C 0 1 N N N ?      ?       ?      -10.272 -4.198 0.022  C35 K3I 63 
K3I C36 C36 C 0 1 N N N ?      ?       ?      -11.278 -3.142 0.496  C36 K3I 64 
K3I C37 C37 C 0 1 N N N ?      ?       ?      -10.506 -1.877 0.882  C37 K3I 65 
K3I C38 C38 C 0 1 N N N ?      ?       ?      -9.715  -2.137 2.166  C38 K3I 66 
K3I C39 C39 C 0 1 N N N ?      ?       ?      -11.494 -0.733 1.121  C39 K3I 67 
K3I O1  O2  O 0 1 N N N ?      ?       ?      -10.939 -5.447 -0.166 O1  K3I 68 
K3I C41 C41 C 0 1 N N N ?      ?       ?      -8.226  -1.801 -2.225 C41 K3I 69 
K3I H1  H1  H 0 1 N N N ?      ?       ?      0.541   4.664  0.117  H1  K3I 70 
K3I H11 H11 H 0 1 N N N ?      ?       ?      -1.612  2.452  -0.009 H11 K3I 71 
K3I H26 H26 H 0 1 N N N ?      ?       ?      -1.694  5.553  0.123  H26 K3I 72 
K3I H31 H31 H 0 1 N N N ?      ?       ?      -4.603  5.851  -0.935 H31 K3I 73 
K3I H32 H32 H 0 1 N N N ?      ?       ?      -5.321  5.231  0.571  H32 K3I 74 
K3I H33 H33 H 0 1 N N N ?      ?       ?      -3.930  6.339  0.639  H33 K3I 75 
K3I H34 H34 H 0 1 N N N ?      ?       ?      -3.291  2.200  -0.044 H34 K3I 76 
K3I H35 H35 H 0 1 N N N ?      ?       ?      -5.999  3.684  -0.019 H35 K3I 77 
K3I H36 H36 H 0 1 N N N ?      ?       ?      -5.165  0.693  -0.135 H36 K3I 78 
K3I H37 H37 H 0 1 N N N ?      ?       ?      -7.029  -0.816 -0.227 H37 K3I 79 
K3I H38 H38 H 0 1 N N N ?      ?       ?      -8.339  2.841  -1.118 H38 K3I 80 
K3I H39 H39 H 0 1 N N N ?      ?       ?      -9.057  2.221  0.388  H39 K3I 81 
K3I H40 H40 H 0 1 N N N ?      ?       ?      -7.665  3.329  0.456  H40 K3I 82 
K3I H41 H41 H 0 1 N N N ?      ?       ?      -9.718  0.672  -0.255 H41 K3I 83 
K3I H42 H42 H 0 1 N N N ?      ?       ?      -10.426 -3.793 -2.087 H42 K3I 84 
K3I H43 H43 H 0 1 N N N ?      ?       ?      -8.830  -4.377 -1.567 H43 K3I 85 
K3I H44 H44 H 0 1 N N N ?      ?       ?      -9.481  -4.309 0.764  H44 K3I 86 
K3I H45 H45 H 0 1 N N N ?      ?       ?      -11.979 -2.917 -0.308 H45 K3I 87 
K3I H46 H46 H 0 1 N N N ?      ?       ?      -11.821 -3.518 1.364  H46 K3I 88 
K3I H47 H47 H 0 1 N N N ?      ?       ?      -9.014  -2.956 2.001  H47 K3I 89 
K3I H48 H48 H 0 1 N N N ?      ?       ?      -9.165  -1.238 2.442  H48 K3I 90 
K3I H49 H49 H 0 1 N N N ?      ?       ?      -10.403 -2.403 2.969  H49 K3I 91 
K3I H50 H50 H 0 1 N N N ?      ?       ?      -12.125 -0.971 1.977  H50 K3I 92 
K3I H51 H51 H 0 1 N N N ?      ?       ?      -10.943 0.186  1.319  H51 K3I 93 
K3I H52 H52 H 0 1 N N N ?      ?       ?      -12.117 -0.600 0.237  H52 K3I 94 
K3I H53 H53 H 0 1 N N N ?      ?       ?      -10.363 -6.157 -0.480 H53 K3I 95 
K3I H54 H54 H 0 1 N N N ?      ?       ?      -7.205  -2.022 -1.914 H54 K3I 96 
K3I H55 H55 H 0 1 N N N ?      ?       ?      -8.428  -2.286 -3.180 H55 K3I 97 
K3I H56 H56 H 0 1 N N N ?      ?       ?      -8.348  -0.723 -2.332 H56 K3I 98 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
K3I C14 C13 DOUB N E 1  
K3I C20 C13 SING N N 2  
K3I C13 C12 SING N N 3  
K3I C12 C11 DOUB N E 4  
K3I C11 C10 SING N N 5  
K3I C10 C9  DOUB N E 6  
K3I C9  C19 SING N N 7  
K3I C9  C8  SING N N 8  
K3I C8  C7  DOUB N E 9  
K3I C18 C5  SING N N 10 
K3I C7  C6  SING N N 11 
K3I C5  C6  DOUB N N 12 
K3I C5  C4  SING N N 13 
K3I C6  C1  SING N N 14 
K3I C16 C1  SING N N 15 
K3I C4  C3  SING N N 16 
K3I C1  C17 SING N N 17 
K3I C1  C2  SING N N 18 
K3I C2  C3  SING N N 19 
K3I C3  O3  SING N N 20 
K3I C17 H2  SING N N 21 
K3I C17 H3  SING N N 22 
K3I C17 H4  SING N N 23 
K3I C4  H5  SING N N 24 
K3I C4  H6  SING N N 25 
K3I C3  H7  SING N N 26 
K3I O3  H8  SING N N 27 
K3I C2  H9  SING N N 28 
K3I C2  H10 SING N N 29 
K3I C18 H12 SING N N 30 
K3I C18 H13 SING N N 31 
K3I C18 H14 SING N N 32 
K3I C16 H15 SING N N 33 
K3I C16 H16 SING N N 34 
K3I C16 H17 SING N N 35 
K3I C7  H18 SING N N 36 
K3I C8  H19 SING N N 37 
K3I C19 H20 SING N N 38 
K3I C19 H21 SING N N 39 
K3I C19 H22 SING N N 40 
K3I C10 H23 SING N N 41 
K3I C11 H24 SING N N 42 
K3I C12 H25 SING N N 43 
K3I C20 H27 SING N N 44 
K3I C20 H28 SING N N 45 
K3I C20 H29 SING N N 46 
K3I C14 H30 SING N N 47 
K3I C14 C15 SING N N 48 
K3I C15 C21 DOUB N N 49 
K3I C21 C22 SING N N 50 
K3I C22 C23 DOUB N N 51 
K3I C23 C24 SING N N 52 
K3I C23 C25 SING N N 53 
K3I C25 C26 DOUB N N 54 
K3I C26 C27 SING N N 55 
K3I C27 C28 DOUB N N 56 
K3I C28 C29 SING N N 57 
K3I C28 C30 SING N N 58 
K3I C29 C31 DOUB N N 59 
K3I C31 C32 SING N N 60 
K3I C32 C33 DOUB N N 61 
K3I C33 C34 SING N N 62 
K3I C34 C35 SING N N 63 
K3I C35 C36 SING N N 64 
K3I C36 C37 SING N N 65 
K3I C37 C32 SING N N 66 
K3I C37 C38 SING N N 67 
K3I C37 C39 SING N N 68 
K3I C35 O1  SING N N 69 
K3I C33 C41 SING N N 70 
K3I C15 H1  SING N N 71 
K3I C21 H11 SING N N 72 
K3I C22 H26 SING N N 73 
K3I C24 H31 SING N N 74 
K3I C24 H32 SING N N 75 
K3I C24 H33 SING N N 76 
K3I C25 H34 SING N N 77 
K3I C26 H35 SING N N 78 
K3I C27 H36 SING N N 79 
K3I C29 H37 SING N N 80 
K3I C30 H38 SING N N 81 
K3I C30 H39 SING N N 82 
K3I C30 H40 SING N N 83 
K3I C31 H41 SING N N 84 
K3I C34 H42 SING N N 85 
K3I C34 H43 SING N N 86 
K3I C35 H44 SING N N 87 
K3I C36 H45 SING N N 88 
K3I C36 H46 SING N N 89 
K3I C38 H47 SING N N 90 
K3I C38 H48 SING N N 91 
K3I C38 H49 SING N N 92 
K3I C39 H50 SING N N 93 
K3I C39 H51 SING N N 94 
K3I C39 H52 SING N N 95 
K3I O1  H53 SING N N 96 
K3I C41 H54 SING N N 97 
K3I C41 H55 SING N N 98 
K3I C41 H56 SING N N 99 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
K3I InChI            InChI                1.06  "InChI=1S/C40H56O2/c1-29(17-13-19-31(3)21-23-37-33(5)25-35(41)27-39(37,7)8)15-11-12-16-30(2)18-14-20-32(4)22-24-38-34(6)26-36(42)28-40(38,9)10/h11-24,35-36,41-42H,25-28H2,1-10H3/b12-11?,17-13+,18-14?,23-21+,24-22?,29-15+,30-16?,31-19+,32-20?/t35-,36?/m0/s1" 
K3I InChIKey         InChI                1.06  JKQXZKUSFCKOGQ-VSRJLPPESA-N                                                                                                                                                                                                                                       
K3I SMILES_CANONICAL CACTVS               3.385 "CC(=C/C=CC=C(C)C=CC=C(C)C=CC1=C(C)CC(O)CC1(C)C)\C=C\C=C(C)\C=C\C2=C(C)C[C@H](O)CC2(C)C"                                                                                                                                                                          
K3I SMILES           CACTVS               3.385 "CC(=CC=CC=C(C)C=CC=C(C)C=CC1=C(C)CC(O)CC1(C)C)C=CC=C(C)C=CC2=C(C)C[CH](O)CC2(C)C"                                                                                                                                                                                
K3I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(C(C[C@H](C1)O)(C)C)/C=C/C(=C/C=C/C(=CC=CC=C(C)C=CC=C(C)C=CC2=C(CC(CC2(C)C)O)C)C)/C"                                                                                                                                                                        
K3I SMILES           "OpenEye OEToolkits" 2.0.7 "CC1=C(C(CC(C1)O)(C)C)C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC2=C(CC(CC2(C)C)O)C)C)C"                                                                                                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           K3I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl)octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
K3I "Create component"   2022-05-18 PDBE 
K3I "Modify coordinates" 2022-05-20 PDBE 
K3I "Modify descriptor"  2022-08-22 RCSB 
K3I "Initial release"    2023-03-29 RCSB 
# 
