data_GYI
#

_chem_comp.id                                   GYI
_chem_comp.name                                 "3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)-N-(propane-2-sulfonyl)propanamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H31 N5 O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2022-01-03
_chem_comp.pdbx_modified_date                   2022-02-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       465.566
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GYI
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5SCS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GYI  C12   C1   C  0  1  N  N  N  -4.575  -0.241  12.154   3.109   0.760  -0.117  C12   GYI   1  
GYI  C13   C2   C  0  1  N  N  N  -4.669   1.218  11.727   1.599   0.759  -0.362  C13   GYI   2  
GYI  C14   C3   C  0  1  N  N  N  -4.191   2.168  12.821   1.024   2.131  -0.005  C14   GYI   3  
GYI  O15   O1   O  0  1  N  N  N  -2.752   2.116  12.714  -0.387   2.131  -0.234  O15   GYI   4  
GYI  C16   C4   C  0  1  Y  N  N  -1.914   2.802  13.556  -1.056   3.282   0.036  C16   GYI   5  
GYI  C18   C5   C  0  1  N  N  N  -0.141   2.058  11.944  -3.175   2.154  -0.689  C18   GYI   6  
GYI  C26   C6   C  0  1  N  N  N   3.850  -0.953   9.863  -4.333  -3.110  -0.784  C26   GYI   7  
GYI  C29   C7   C  0  1  Y  N  N   0.332   3.476  14.013  -3.104   4.526   0.105  C29   GYI   8  
GYI  C30   C8   C  0  1  Y  N  N  -0.093   4.145  15.155  -2.418   5.627   0.584  C30   GYI   9  
GYI  C31   C9   C  0  1  Y  N  N  -1.429   4.134  15.487  -1.051   5.560   0.783  C31   GYI  10  
GYI  C32   C10  C  0  1  Y  N  N  -2.344   3.463  14.686  -0.369   4.391   0.510  C32   GYI  11  
GYI  C01   C11  C  0  1  N  N  N  -1.984  -1.217  15.316   4.162  -2.929   1.992  C01   GYI  12  
GYI  C02   C12  C  0  1  N  N  N  -3.426  -0.815  15.685   4.588  -1.461   2.066  C02   GYI  13  
GYI  C03   C13  C  0  1  Y  N  N  -4.364  -1.864  15.139   5.505  -1.145   0.912  C03   GYI  14  
GYI  N04   N1   N  0  1  Y  N  N  -4.329  -3.064  15.730   6.815  -1.304   1.033  N04   GYI  15  
GYI  C05   C14  C  0  1  Y  N  N  -5.130  -4.028  15.290   7.631  -1.030   0.027  C05   GYI  16  
GYI  N06   N2   N  0  1  N  N  N  -5.074  -5.229  15.915   8.995  -1.210   0.196  N06   GYI  17  
GYI  N07   N3   N  0  1  Y  N  N  -5.975  -3.873  14.261   7.178  -0.589  -1.137  N07   GYI  18  
GYI  C08   C15  C  0  1  Y  N  N  -6.013  -2.684  13.671   5.877  -0.405  -1.332  C08   GYI  19  
GYI  N09   N4   N  0  1  N  N  N  -6.850  -2.468  12.628   5.406   0.057  -2.552  N09   GYI  20  
GYI  C10   C16  C  0  1  Y  N  N  -5.198  -1.625  14.090   4.987  -0.691  -0.289  C10   GYI  21  
GYI  O11   O2   O  0  1  N  N  N  -5.310  -0.422  13.402   3.646  -0.522  -0.451  O11   GYI  22  
GYI  C17   C17  C  0  1  Y  N  N  -0.554   2.799  13.203  -2.426   3.354  -0.169  C17   GYI  23  
GYI  C19   C18  C  0  1  N  N  N  -0.116   0.531  12.056  -3.545   1.238   0.479  C19   GYI  24  
GYI  C20   C19  C  0  1  N  N  N   1.285  -0.027  11.911  -4.293   0.038  -0.041  C20   GYI  25  
GYI  O21   O3   O  0  1  N  N  N   2.281   0.440  12.406  -4.509  -0.074  -1.230  O21   GYI  26  
GYI  N22   N5   N  0  1  N  N  N   1.302  -1.174  11.116  -4.722  -0.912   0.813  N22   GYI  27  
GYI  S23   S1   S  0  1  N  N  N   2.687  -2.115  10.722  -5.545  -2.231   0.242  S23   GYI  28  
GYI  O24   O4   O  0  1  N  N  N   3.419  -2.580  12.041  -6.574  -1.678  -0.566  O24   GYI  29  
GYI  O25   O5   O  0  1  N  N  N   2.276  -3.202   9.654  -5.852  -2.984   1.407  O25   GYI  30  
GYI  C27   C20  C  0  1  N  N  N   4.895  -0.386  10.820  -3.134  -3.513   0.077  C27   GYI  31  
GYI  C28   C21  C  0  1  N  N  N   3.119   0.046   8.979  -4.981  -4.363  -1.376  C28   GYI  32  
GYI  H121  H1   H  0  0  N  N  N  -3.520  -0.513  12.305   3.578   1.523  -0.739  H121  GYI  33  
GYI  H122  H2   H  0  0  N  N  N  -5.011  -0.882  11.374   3.307   0.975   0.933  H122  GYI  34  
GYI  H132  H3   H  0  0  N  N  N  -4.047   1.366  10.832   1.401   0.544  -1.412  H132  GYI  35  
GYI  H131  H4   H  0  0  N  N  N  -5.717   1.451  11.488   1.130  -0.004   0.259  H131  GYI  36  
GYI  H142  H5   H  0  0  N  N  N  -4.561   3.189  12.644   1.222   2.346   1.045  H142  GYI  37  
GYI  H141  H6   H  0  0  N  N  N  -4.523   1.825  13.812   1.492   2.894  -0.627  H141  GYI  38  
GYI  H181  H7   H  0  0  N  N  N   0.870   2.394  11.669  -4.083   2.483  -1.194  H181  GYI  39  
GYI  H182  H8   H  0  0  N  N  N  -0.847   2.328  11.145  -2.545   1.610  -1.393  H182  GYI  40  
GYI  H261  H9   H  0  0  N  N  N   4.399  -1.615   9.178  -3.999  -2.458  -1.590  H261  GYI  41  
GYI  H291  H10  H  0  0  N  N  N   1.381   3.487  13.755  -4.171   4.582  -0.054  H291  GYI  42  
GYI  H301  H11  H  0  0  N  N  N   0.619   4.669  15.776  -2.950   6.542   0.798  H301  GYI  43  
GYI  H311  H12  H  0  0  N  N  N  -1.767   4.649  16.374  -0.518   6.422   1.156  H311  GYI  44  
GYI  H321  H13  H  0  0  N  N  N  -3.392   3.459  14.949   0.698   4.339   0.667  H321  GYI  45  
GYI  H012  H14  H  0  0  N  N  N  -1.282  -0.465  15.705   3.639  -3.108   1.053  H012  GYI  46  
GYI  H011  H15  H  0  0  N  N  N  -1.752  -2.197  15.758   5.045  -3.566   2.043  H011  GYI  47  
GYI  H013  H16  H  0  0  N  N  N  -1.889  -1.276  14.222   3.499  -3.157   2.826  H013  GYI  48  
GYI  H021  H17  H  0  0  N  N  N  -3.528  -0.758  16.779   3.706  -0.823   2.014  H021  GYI  49  
GYI  H022  H18  H  0  0  N  N  N  -3.664   0.164  15.243   5.112  -1.282   3.005  H022  GYI  50  
GYI  H062  H19  H  0  0  N  N  N  -4.397  -5.191  16.650   9.340  -1.533   1.043  H062  GYI  51  
GYI  H061  H20  H  0  0  N  N  N  -5.971  -5.447  16.299   9.604  -1.013  -0.533  H061  GYI  52  
GYI  H092  H21  H  0  0  N  N  N  -7.364  -3.304  12.434   6.028   0.249  -3.271  H092  GYI  53  
GYI  H091  H22  H  0  0  N  N  N  -7.486  -1.732  12.858   4.454   0.189  -2.687  H091  GYI  54  
GYI  H191  H23  H  0  0  N  N  N  -0.514   0.241  13.040  -2.637   0.908   0.984  H191  GYI  55  
GYI  H192  H24  H  0  0  N  N  N  -0.751   0.107  11.264  -4.175   1.782   1.182  H192  GYI  56  
GYI  H221  H25  H  0  0  N  N  N   0.426  -1.477  10.740  -4.549  -0.823   1.764  H221  GYI  57  
GYI  H272  H26  H  0  0  N  N  N   5.562   0.296  10.273  -2.407  -4.042  -0.539  H272  GYI  58  
GYI  H271  H27  H  0  0  N  N  N   4.391   0.164  11.628  -2.673  -2.621   0.499  H271  GYI  59  
GYI  H273  H28  H  0  0  N  N  N   5.484  -1.210  11.249  -3.469  -4.166   0.883  H273  GYI  60  
GYI  H283  H29  H  0  0  N  N  N   3.849   0.710   8.494  -5.835  -4.075  -1.989  H283  GYI  61  
GYI  H281  H30  H  0  0  N  N  N   2.547  -0.494   8.210  -4.253  -4.891  -1.992  H281  GYI  62  
GYI  H282  H31  H  0  0  N  N  N   2.431   0.645   9.594  -5.316  -5.015  -0.569  H282  GYI  63  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GYI  C02  C01   SING  N  N   1  
GYI  C03  C02   SING  N  N   2  
GYI  N04  C03   DOUB  Y  N   3  
GYI  C05  N04   SING  Y  N   4  
GYI  N06  C05   SING  N  N   5  
GYI  N07  C05   DOUB  Y  N   6  
GYI  C08  N07   SING  Y  N   7  
GYI  N09  C08   SING  N  N   8  
GYI  C10  C08   DOUB  Y  N   9  
GYI  O11  C10   SING  N  N  10  
GYI  C12  O11   SING  N  N  11  
GYI  C13  C12   SING  N  N  12  
GYI  C14  C13   SING  N  N  13  
GYI  O15  C14   SING  N  N  14  
GYI  C16  O15   SING  N  N  15  
GYI  C17  C16   DOUB  Y  N  16  
GYI  C19  C18   SING  N  N  17  
GYI  C20  C19   SING  N  N  18  
GYI  O21  C20   DOUB  N  N  19  
GYI  N22  C20   SING  N  N  20  
GYI  S23  N22   SING  N  N  21  
GYI  O24  S23   DOUB  N  N  22  
GYI  O25  S23   DOUB  N  N  23  
GYI  C26  S23   SING  N  N  24  
GYI  C27  C26   SING  N  N  25  
GYI  C28  C26   SING  N  N  26  
GYI  C18  C17   SING  N  N  27  
GYI  C29  C17   SING  Y  N  28  
GYI  C30  C29   DOUB  Y  N  29  
GYI  C31  C30   SING  Y  N  30  
GYI  C32  C31   DOUB  Y  N  31  
GYI  C03  C10   SING  Y  N  32  
GYI  C16  C32   SING  Y  N  33  
GYI  C12  H121  SING  N  N  34  
GYI  C12  H122  SING  N  N  35  
GYI  C13  H132  SING  N  N  36  
GYI  C13  H131  SING  N  N  37  
GYI  C14  H142  SING  N  N  38  
GYI  C14  H141  SING  N  N  39  
GYI  C18  H181  SING  N  N  40  
GYI  C18  H182  SING  N  N  41  
GYI  C26  H261  SING  N  N  42  
GYI  C29  H291  SING  N  N  43  
GYI  C30  H301  SING  N  N  44  
GYI  C31  H311  SING  N  N  45  
GYI  C32  H321  SING  N  N  46  
GYI  C01  H012  SING  N  N  47  
GYI  C01  H011  SING  N  N  48  
GYI  C01  H013  SING  N  N  49  
GYI  C02  H021  SING  N  N  50  
GYI  C02  H022  SING  N  N  51  
GYI  N06  H062  SING  N  N  52  
GYI  N06  H061  SING  N  N  53  
GYI  N09  H092  SING  N  N  54  
GYI  N09  H091  SING  N  N  55  
GYI  C19  H191  SING  N  N  56  
GYI  C19  H192  SING  N  N  57  
GYI  N22  H221  SING  N  N  58  
GYI  C27  H272  SING  N  N  59  
GYI  C27  H271  SING  N  N  60  
GYI  C27  H273  SING  N  N  61  
GYI  C28  H283  SING  N  N  62  
GYI  C28  H281  SING  N  N  63  
GYI  C28  H282  SING  N  N  64  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GYI  SMILES            ACDLabs               12.01  "CCc1nc(N)nc(N)c1OCCCOc1ccccc1CCC(=O)NS(=O)(=O)C(C)C"  
GYI  InChI             InChI                 1.03   "InChI=1S/C21H31N5O5S/c1-4-16-19(20(22)25-21(23)24-16)31-13-7-12-30-17-9-6-5-8-15(17)10-11-18(27)26-32(28,29)14(2)3/h5-6,8-9,14H,4,7,10-13H2,1-3H3,(H,26,27)(H4,22,23,24,25)"  
GYI  InChIKey          InChI                 1.03   QXPZUWQEJRSGQD-UHFFFAOYSA-N  
GYI  SMILES_CANONICAL  CACTVS                3.385  "CCc1nc(N)nc(N)c1OCCCOc2ccccc2CCC(=O)N[S](=O)(=O)C(C)C"  
GYI  SMILES            CACTVS                3.385  "CCc1nc(N)nc(N)c1OCCCOc2ccccc2CCC(=O)N[S](=O)(=O)C(C)C"  
GYI  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(n1)N)N)OCCCOc2ccccc2CCC(=O)NS(=O)(=O)C(C)C"  
GYI  SMILES            "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(n1)N)N)OCCCOc2ccccc2CCC(=O)NS(=O)(=O)C(C)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GYI  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)-N-(propane-2-sulfonyl)propanamide"  
GYI  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "3-[2-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]oxypropoxy]phenyl]-~{N}-propan-2-ylsulfonyl-propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GYI  "Create component"  2022-01-03  RCSB  
GYI  "Initial release"   2022-02-09  RCSB  
##
