data_C4I
# 
_chem_comp.id                                    C4I 
_chem_comp.name                                  "(3~{S})-1-[[4-(naphthalen-1-ylcarbamoyl)phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C40 H43 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-14 
_chem_comp.pdbx_modified_date                    2022-12-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        625.802 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     C4I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QHE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
C4I N1  N1  N 0 1 Y N N 22.871 38.459 42.453 -11.526 0.559  -0.141 N1  C4I 1  
C4I N3  N2  N 0 1 N N N 19.739 45.200 38.198 -2.934  -0.380 -0.003 N3  C4I 2  
C4I C4  C1  C 0 1 Y N N 24.019 40.156 43.802 -11.751 -1.703 0.590  C4  C4I 3  
C4I C5  C2  C 0 1 Y N N 23.324 39.773 42.581 -10.996 -0.530 0.418  C5  C4I 4  
C4I C6  C3  C 0 1 Y N N 23.134 40.716 41.545 -9.648  -0.512 0.849  C6  C4I 5  
C4I C7  C4  C 0 1 Y N N 22.439 40.299 40.340 -8.897  0.672  0.672  C7  C4I 6  
C4I C8  C5  C 0 1 Y N N 22.229 38.101 41.339 -10.840 1.676  -0.317 C8  C4I 7  
C4I C10 C6  C 0 1 N N N 21.420 38.394 38.972 -8.700  3.020  -0.093 C10 C4I 8  
C4I C13 C7  C 0 1 N N N 20.642 37.057 39.115 -9.356  3.954  -1.107 C13 C4I 9  
C4I C15 C8  C 0 1 N N N 20.936 42.999 38.178 -5.242  0.191  0.571  C15 C4I 10 
C4I C17 C9  C 0 1 N N N 19.706 46.572 38.248 -1.933  -0.827 -0.788 C17 C4I 11 
C4I C20 C10 C 0 1 N N N 17.387 46.483 37.357 0.415   -1.398 -1.347 C20 C4I 12 
C4I C21 C11 C 0 1 N N N 19.028 48.201 36.315 -0.446  -1.752 0.970  C21 C4I 13 
C4I C22 C12 C 0 1 N N N 19.238 47.269 35.098 1.004   -1.819 1.458  C22 C4I 14 
C4I C24 C13 C 0 1 Y N N 16.053 44.305 36.689 4.146   -1.622 -1.397 C24 C4I 15 
C4I C26 C14 C 0 1 Y N N 16.842 42.458 38.105 6.101   -2.465 -0.300 C26 C4I 16 
C4I C28 C15 C 0 1 Y N N 14.873 44.313 37.443 4.775   -0.407 -1.607 C28 C4I 17 
C4I C1  C16 C 0 1 Y N N 23.631 42.038 41.754 -9.090  -1.655 1.436  C1  C4I 18 
C4I C11 C17 C 0 1 N N N 21.494 36.805 41.452 -11.564 2.828  -0.968 C11 C4I 19 
C4I C12 C18 C 0 1 N N N 21.324 36.131 40.098 -10.826 4.140  -0.712 C12 C4I 20 
C4I C14 C19 C 0 1 N N N 22.160 42.165 38.684 -6.677  0.215  0.040  C14 C4I 21 
C4I C16 C20 C 0 1 N N N 20.783 44.384 38.810 -4.308  -0.357 -0.511 C16 C4I 22 
C4I C18 C21 C 0 1 N N S 18.602 47.402 37.610 -0.520  -0.850 -0.266 C18 C4I 23 
C4I C19 C22 C 0 1 N N N 18.531 45.950 35.310 1.894   -2.338 0.327  C19 C4I 24 
C4I C2  C23 C 0 1 Y N N 24.279 42.392 42.920 -9.852  -2.775 1.587  C2  C4I 25 
C4I C23 C24 C 0 1 N N N 16.261 45.238 35.526 2.736   -1.830 -1.885 C23 C4I 26 
C4I C25 C25 C 0 1 Y N N 15.647 42.463 38.876 6.742   -1.243 -0.510 C25 C4I 27 
C4I C27 C26 C 0 1 Y N N 17.031 43.351 37.033 4.807   -2.647 -0.745 C27 C4I 28 
C4I C29 C27 C 0 1 Y N N 14.681 43.417 38.506 6.069   -0.212 -1.168 C29 C4I 29 
C4I C3  C28 C 0 1 Y N N 24.493 41.427 43.963 -11.179 -2.797 1.164  C3  C4I 30 
C4I C30 C29 C 0 1 N N N 15.446 41.523 40.039 8.127   -1.040 -0.036 C30 C4I 31 
C4I C31 C30 C 0 1 Y N N 14.140 40.674 42.120 10.087  0.295  0.102  C31 C4I 32 
C4I C32 C31 C 0 1 Y N N 13.711 38.852 44.289 12.792  0.566  0.774  C32 C4I 33 
C4I C33 C32 C 0 1 Y N N 13.953 38.386 43.013 12.264  -0.657 0.491  C33 C4I 34 
C4I C34 C33 C 0 1 Y N N 14.155 39.295 41.940 10.921  -0.801 0.156  C34 C4I 35 
C4I C35 C34 C 0 1 Y N N 13.895 41.178 43.515 10.606  1.576  0.392  C35 C4I 36 
C4I C36 C35 C 0 1 Y N N 13.688 40.266 44.575 11.975  1.709  0.732  C36 C4I 37 
C4I C37 C36 C 0 1 Y N N 13.454 40.745 45.922 12.491  2.984  1.019  C37 C4I 38 
C4I C38 C37 C 0 1 Y N N 13.856 42.570 43.891 9.792   2.718  0.349  C38 C4I 39 
C4I C39 C38 C 0 1 Y N N 13.617 43.021 45.181 10.326  3.938  0.634  C39 C4I 40 
C4I C40 C39 C 0 1 Y N N 13.417 42.096 46.222 11.672  4.070  0.968  C40 C4I 41 
C4I C9  C40 C 0 1 Y N N 21.951 38.986 40.266 -9.518  1.768  0.082  C9  C4I 42 
C4I N2  N3  N 0 1 N N N 21.718 41.280 39.703 -7.574  0.740  1.079  N2  C4I 43 
C4I N4  N4  N 0 1 N N N 17.224 46.289 35.874 1.790   -1.441 -0.831 N4  C4I 44 
C4I N5  N5  N 0 1 N N N 14.379 41.528 40.962 8.743   0.141  -0.240 N5  C4I 45 
C4I O1  O1  O 0 1 N N N 20.625 47.145 38.860 -2.170  -1.209 -1.914 O1  C4I 46 
C4I O2  O2  O 0 1 N N N 16.342 40.678 40.222 8.711   -1.939 0.537  O2  C4I 47 
C4I H1  H1  H 0 1 N N N 19.002 44.731 37.712 -2.744  -0.074 0.897  H1  C4I 48 
C4I H2  H2  H 0 1 N N N 24.161 39.428 44.587 -12.781 -1.736 0.269  H2  C4I 49 
C4I H3  H3  H 0 1 N N N 22.276 38.218 38.304 -7.703  2.753  -0.442 H3  C4I 50 
C4I H4  H4  H 0 1 N N N 20.744 39.132 38.515 -8.618  3.532  0.866  H4  C4I 51 
C4I H5  H5  H 0 1 N N N 19.623 37.271 39.471 -8.849  4.919  -1.101 H5  C4I 52 
C4I H6  H6  H 0 1 N N N 20.592 36.564 38.133 -9.297  3.514  -2.103 H6  C4I 53 
C4I H7  H7  H 0 1 N N N 21.041 43.131 37.091 -4.936  1.202  0.837  H7  C4I 54 
C4I H8  H8  H 0 1 N N N 20.022 42.425 38.391 -5.191  -0.449 1.452  H8  C4I 55 
C4I H9  H9  H 0 1 N N N 16.480 46.948 37.771 0.100   -2.403 -1.624 H9  C4I 56 
C4I H10 H10 H 0 1 N N N 17.553 45.509 37.841 0.376   -0.750 -2.222 H10 C4I 57 
C4I H11 H11 H 0 1 N N N 19.968 48.733 36.520 -0.789  -2.754 0.711  H11 C4I 58 
C4I H12 H12 H 0 1 N N N 18.240 48.929 36.072 -1.078  -1.343 1.758  H12 C4I 59 
C4I H13 H13 H 0 1 N N N 20.314 47.085 34.965 1.334   -0.823 1.754  H13 C4I 60 
C4I H14 H14 H 0 1 N N N 18.835 47.755 34.197 1.070   -2.493 2.312  H14 C4I 61 
C4I H15 H15 H 0 1 N N N 17.623 41.753 38.348 6.616   -3.266 0.208  H15 C4I 62 
C4I H16 H16 H 0 1 N N N 14.095 45.023 37.202 4.253   0.389  -2.117 H16 C4I 63 
C4I H17 H17 H 0 1 N N N 23.497 42.780 40.980 -8.062  -1.649 1.767  H17 C4I 64 
C4I H18 H18 H 0 1 N N N 20.500 36.996 41.882 -11.625 2.654  -2.042 H18 C4I 65 
C4I H19 H19 H 0 1 N N N 22.058 36.133 42.116 -12.571 2.898  -0.557 H19 C4I 66 
C4I H20 H20 H 0 1 N N N 20.714 35.224 40.221 -10.891 4.397  0.345  H20 C4I 67 
C4I H21 H21 H 0 1 N N N 22.314 35.856 39.706 -11.269 4.933  -1.313 H21 C4I 68 
C4I H22 H22 H 0 1 N N N 22.584 41.587 37.850 -6.728  0.854  -0.841 H22 C4I 69 
C4I H23 H23 H 0 1 N N N 22.927 42.842 39.089 -6.983  -0.797 -0.226 H23 C4I 70 
C4I H24 H24 H 0 1 N N N 20.542 44.254 39.875 -4.359  0.283  -1.392 H24 C4I 71 
C4I H25 H25 H 0 1 N N N 21.741 44.917 38.713 -4.614  -1.368 -0.777 H25 C4I 72 
C4I H26 H26 H 0 1 N N N 18.288 48.151 38.352 -0.213  0.161  0.003  H26 C4I 73 
C4I H27 H27 H 0 1 N N N 18.411 45.421 34.353 2.930   -2.373 0.667  H27 C4I 74 
C4I H28 H28 H 0 1 N N N 19.099 45.318 36.009 1.572   -3.339 0.041  H28 C4I 75 
C4I H29 H29 H 0 1 N N N 24.629 43.405 43.050 -9.422  -3.657 2.039  H29 C4I 76 
C4I H30 H30 H 0 1 N N N 15.300 45.702 35.258 2.564   -1.219 -2.771 H30 C4I 77 
C4I H31 H31 H 0 1 N N N 16.644 44.666 34.668 2.589   -2.881 -2.135 H31 C4I 78 
C4I H32 H32 H 0 1 N N N 17.946 43.304 36.462 4.310   -3.592 -0.583 H32 C4I 79 
C4I H33 H33 H 0 1 N N N 13.756 43.461 39.062 6.559   0.736  -1.334 H33 C4I 80 
C4I H34 H34 H 0 1 N N N 25.022 41.703 44.863 -11.763 -3.696 1.294  H34 C4I 81 
C4I H35 H35 H 0 1 N N N 13.536 38.146 45.087 13.836  0.657  1.032  H35 C4I 82 
C4I H36 H36 H 0 1 N N N 13.989 37.322 42.829 12.899  -1.530 0.526  H36 C4I 83 
C4I H37 H37 H 0 1 N N N 14.326 38.901 40.949 10.528  -1.782 -0.065 H37 C4I 84 
C4I H38 H38 H 0 1 N N N 13.304 40.027 46.715 13.533  3.101  1.279  H38 C4I 85 
C4I H39 H39 H 0 1 N N N 14.023 43.307 43.120 8.747   2.630  0.091  H39 C4I 86 
C4I H40 H40 H 0 1 N N N 13.585 44.081 45.386 9.698   4.815  0.600  H40 C4I 87 
C4I H41 H41 H 0 1 N N N 13.239 42.432 47.233 12.072  5.049  1.189  H41 C4I 88 
C4I H42 H42 H 0 1 N N N 21.400 41.879 40.438 -7.438  0.255  1.953  H42 C4I 89 
C4I H44 H44 H 0 1 N N N 13.680 42.223 40.797 8.253   0.884  -0.625 H44 C4I 90 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
C4I C22 C19 SING N N 1  
C4I C22 C21 SING N N 2  
C4I C19 N4  SING N N 3  
C4I C23 N4  SING N N 4  
C4I C23 C24 SING N N 5  
C4I N4  C20 SING N N 6  
C4I C21 C18 SING N N 7  
C4I C24 C27 DOUB Y N 8  
C4I C24 C28 SING Y N 9  
C4I C27 C26 SING Y N 10 
C4I C20 C18 SING N N 11 
C4I C28 C29 DOUB Y N 12 
C4I C18 C17 SING N N 13 
C4I C26 C25 DOUB Y N 14 
C4I C15 C14 SING N N 15 
C4I C15 C16 SING N N 16 
C4I N3  C17 SING N N 17 
C4I N3  C16 SING N N 18 
C4I C17 O1  DOUB N N 19 
C4I C29 C25 SING Y N 20 
C4I C14 N2  SING N N 21 
C4I C25 C30 SING N N 22 
C4I C10 C13 SING N N 23 
C4I C10 C9  SING N N 24 
C4I C13 C12 SING N N 25 
C4I N2  C7  SING N N 26 
C4I C30 O2  DOUB N N 27 
C4I C30 N5  SING N N 28 
C4I C12 C11 SING N N 29 
C4I C9  C7  DOUB Y N 30 
C4I C9  C8  SING Y N 31 
C4I C7  C6  SING Y N 32 
C4I N5  C31 SING N N 33 
C4I C8  C11 SING N N 34 
C4I C8  N1  DOUB Y N 35 
C4I C6  C1  DOUB Y N 36 
C4I C6  C5  SING Y N 37 
C4I C1  C2  SING Y N 38 
C4I C34 C31 DOUB Y N 39 
C4I C34 C33 SING Y N 40 
C4I C31 C35 SING Y N 41 
C4I N1  C5  SING Y N 42 
C4I C5  C4  DOUB Y N 43 
C4I C2  C3  DOUB Y N 44 
C4I C33 C32 DOUB Y N 45 
C4I C35 C38 DOUB Y N 46 
C4I C35 C36 SING Y N 47 
C4I C4  C3  SING Y N 48 
C4I C38 C39 SING Y N 49 
C4I C32 C36 SING Y N 50 
C4I C36 C37 DOUB Y N 51 
C4I C39 C40 DOUB Y N 52 
C4I C37 C40 SING Y N 53 
C4I N3  H1  SING N N 54 
C4I C4  H2  SING N N 55 
C4I C10 H3  SING N N 56 
C4I C10 H4  SING N N 57 
C4I C13 H5  SING N N 58 
C4I C13 H6  SING N N 59 
C4I C15 H7  SING N N 60 
C4I C15 H8  SING N N 61 
C4I C20 H9  SING N N 62 
C4I C20 H10 SING N N 63 
C4I C21 H11 SING N N 64 
C4I C21 H12 SING N N 65 
C4I C22 H13 SING N N 66 
C4I C22 H14 SING N N 67 
C4I C26 H15 SING N N 68 
C4I C28 H16 SING N N 69 
C4I C1  H17 SING N N 70 
C4I C11 H18 SING N N 71 
C4I C11 H19 SING N N 72 
C4I C12 H20 SING N N 73 
C4I C12 H21 SING N N 74 
C4I C14 H22 SING N N 75 
C4I C14 H23 SING N N 76 
C4I C16 H24 SING N N 77 
C4I C16 H25 SING N N 78 
C4I C18 H26 SING N N 79 
C4I C19 H27 SING N N 80 
C4I C19 H28 SING N N 81 
C4I C2  H29 SING N N 82 
C4I C23 H30 SING N N 83 
C4I C23 H31 SING N N 84 
C4I C27 H32 SING N N 85 
C4I C29 H33 SING N N 86 
C4I C3  H34 SING N N 87 
C4I C32 H35 SING N N 88 
C4I C33 H36 SING N N 89 
C4I C34 H37 SING N N 90 
C4I C37 H38 SING N N 91 
C4I C38 H39 SING N N 92 
C4I C39 H40 SING N N 93 
C4I C40 H41 SING N N 94 
C4I N2  H42 SING N N 95 
C4I N5  H44 SING N N 96 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
C4I InChI            InChI                1.06  "InChI=1S/C40H43N5O2/c46-39(42-24-9-23-41-38-33-14-3-5-16-36(33)43-37-17-6-4-15-34(37)38)31-12-8-25-45(27-31)26-28-19-21-30(22-20-28)40(47)44-35-18-7-11-29-10-1-2-13-32(29)35/h1-3,5,7,10-11,13-14,16,18-22,31H,4,6,8-9,12,15,17,23-27H2,(H,41,43)(H,42,46)(H,44,47)/t31-/m0/s1" 
C4I InChIKey         InChI                1.06  YUEGXFMZPDSPEB-HKBQPEDESA-N                                                                                                                                                                                                                                                       
C4I SMILES_CANONICAL CACTVS               3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[C@H]4CCCN(C4)Cc5ccc(cc5)C(=O)Nc6cccc7ccccc67"                                                                                                                                                                                                     
C4I SMILES           CACTVS               3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[CH]4CCCN(C4)Cc5ccc(cc5)C(=O)Nc6cccc7ccccc67"                                                                                                                                                                                                      
C4I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cccc2NC(=O)c3ccc(cc3)CN4CCC[C@@H](C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7"                                                                                                                                                                                                  
C4I SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cccc2NC(=O)c3ccc(cc3)CN4CCCC(C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7"                                                                                                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           C4I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(3~{S})-1-[[4-(naphthalen-1-ylcarbamoyl)phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
C4I "Create component"  2021-12-14 PDBE 
C4I "Modify descriptor" 2022-08-22 RCSB 
C4I "Initial release"   2022-12-21 RCSB 
# 
