data_C0I
# 
_chem_comp.id                                    C0I 
_chem_comp.name                                  "(3~{S})-1-[[4-[2-(1~{H}-indol-3-yl)ethylcarbamoyl]phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C40 H46 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-14 
_chem_comp.pdbx_modified_date                    2022-12-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        642.832 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     C0I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QHD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
C0I C10 C1  C 0 1 Y N N 17.251 42.909 37.340 -2.282  2.735  1.794  C10 C0I 1  
C0I C13 C2  C 0 1 Y N N 16.145 41.601 39.072 -4.152  1.500  0.929  C13 C0I 2  
C0I C15 C3  C 0 1 N N N 20.947 43.338 38.389 5.320   1.470  -0.808 C15 C0I 3  
C0I C17 C4  C 0 1 Y N N 22.279 40.412 40.433 7.483   -1.493 -0.412 C17 C0I 4  
C0I C20 C5  C 0 1 N N N 13.601 39.387 42.715 -7.970  -0.876 -0.973 C20 C0I 5  
C0I C21 C6  C 0 1 Y N N 13.413 40.726 43.335 -8.906  -2.055 -0.893 C21 C0I 6  
C0I C22 C7  C 0 1 Y N N 12.944 41.820 42.620 -8.778  -3.221 -1.546 C22 C0I 7  
C0I C24 C8  C 0 1 Y N N 13.401 42.579 44.776 -10.658 -3.425 -0.332 C24 C0I 8  
C0I C26 C9  C 0 1 Y N N 22.039 38.147 41.304 8.929   -2.784 1.002  C26 C0I 9  
C0I C28 C10 C 0 1 Y N N 23.043 40.736 41.664 6.915   -2.703 -0.869 C28 C0I 10 
C0I C01 C11 C 0 1 N N S 18.382 47.624 37.810 1.962   5.049  -0.781 C01 C0I 11 
C0I C02 C12 C 0 1 N N N 18.857 48.243 36.472 1.605   4.793  -2.247 C02 C0I 12 
C0I C03 C13 C 0 1 N N N 19.045 47.157 35.411 0.482   3.754  -2.317 C03 C0I 13 
C0I C04 C14 C 0 1 N N N 17.733 46.359 35.273 -0.724  4.259  -1.521 C04 C0I 14 
C0I C05 C15 C 0 1 N N N 17.098 46.748 37.557 0.714   5.517  -0.030 C05 C0I 15 
C0I C06 C16 C 0 1 N N N 19.467 46.764 38.489 2.476   3.776  -0.159 C06 C0I 16 
C0I C07 C17 C 0 1 N N N 16.173 44.876 36.235 -1.494  4.842  0.698  C07 C0I 17 
C0I C08 C18 C 0 1 Y N N 16.144 43.751 37.213 -2.429  3.663  0.779  C08 C0I 18 
C0I C09 C19 C 0 1 Y N N 17.260 41.838 38.250 -3.135  1.653  1.873  C09 C0I 19 
C0I C11 C20 C 0 1 Y N N 15.017 43.534 38.016 -3.431  3.513  -0.164 C11 C0I 20 
C0I C12 C21 C 0 1 Y N N 15.021 42.459 38.924 -4.291  2.437  -0.096 C12 C0I 21 
C0I C14 C22 C 0 1 N N N 20.606 44.628 39.109 4.073   1.939  -0.055 C14 C0I 22 
C0I C16 C23 C 0 1 N N N 20.815 42.135 39.318 5.841   0.177  -0.176 C16 C0I 23 
C0I C18 C24 C 0 1 N N N 16.139 40.466 40.021 -5.069  0.343  1.008  C18 C0I 24 
C0I C19 C25 C 0 1 N N N 15.008 39.234 42.063 -6.959  -0.949 0.173  C19 C0I 25 
C0I C23 C26 C 0 1 Y N N 13.723 41.156 44.681 -10.123 -2.148 -0.083 C23 C0I 26 
C0I C25 C27 C 0 1 Y N N 23.236 39.764 42.586 7.410   -3.923 -0.347 C25 C0I 27 
C0I C27 C28 C 0 1 Y N N 21.794 39.079 40.298 8.502   -1.554 0.533  C27 C0I 28 
C0I C29 C29 C 0 1 Y N N 23.984 40.021 43.816 6.853   -5.132 -0.797 C29 C0I 29 
C0I C30 C30 C 0 1 Y N N 23.596 42.063 41.890 5.885   -2.720 -1.819 C30 C0I 30 
C0I C31 C31 C 0 1 Y N N 24.500 41.301 44.038 5.853   -5.114 -1.721 C31 C0I 31 
C0I C32 C32 C 0 1 Y N N 24.284 42.327 43.066 5.369   -3.912 -2.232 C32 C0I 32 
C0I C33 C33 C 0 1 N N N 21.002 38.612 39.083 9.099   -0.252 0.997  C33 C0I 33 
C0I C34 C34 C 0 1 N N N 21.540 36.671 41.173 10.017  -2.911 2.040  C34 C0I 34 
C0I C35 C35 C 0 1 N N N 20.436 36.405 40.088 10.831  -1.623 2.127  C35 C0I 35 
C0I C36 C36 C 0 1 N N N 20.853 37.076 38.807 9.863   -0.447 2.305  C36 C0I 36 
C0I C37 C37 C 0 1 Y N N 13.561 43.286 45.944 -11.834 -3.807 0.306  C37 C0I 37 
C0I C38 C38 C 0 1 Y N N 14.209 40.567 45.864 -10.771 -1.280 0.798  C38 C0I 38 
C0I C39 C39 C 0 1 Y N N 14.387 41.281 47.035 -11.925 -1.676 1.414  C39 C0I 39 
C0I C40 C40 C 0 1 Y N N 14.045 42.683 47.064 -12.457 -2.935 1.172  C40 C0I 40 
C0I N01 N1  N 0 1 N N N 17.387 45.680 36.548 -0.330  4.489  -0.125 N01 C0I 41 
C0I N02 N2  N 0 1 N N N 19.552 45.392 38.441 3.574   3.176  -0.660 N02 C0I 42 
C0I N03 N3  N 0 1 N N N 22.057 41.404 39.463 7.038   -0.273 -0.899 N03 C0I 43 
C0I N04 N4  N 0 1 N N N 15.197 40.313 41.057 -6.050  0.197  0.095  N04 C0I 44 
C0I N05 N5  N 0 1 Y N N 12.935 42.909 43.487 -9.818  -4.051 -1.224 N05 C0I 45 
C0I N06 N6  N 0 1 Y N N 22.750 38.446 42.436 8.389   -3.906 0.558  N06 C0I 46 
C0I O01 O1  O 0 1 N N N 20.377 47.332 39.149 1.901   3.291  0.793  O01 C0I 47 
C0I O02 O2  O 0 1 N N N 16.983 39.538 39.878 -4.939  -0.477 1.896  O02 C0I 48 
C0I H1  H1  H 0 1 N N N 18.121 43.085 36.724 -1.495  2.855  2.524  H1  C0I 49 
C0I H2  H2  H 0 1 N N N 20.262 43.211 37.538 5.066   1.287  -1.852 H2  C0I 50 
C0I H3  H3  H 0 1 N N N 21.982 43.395 38.021 6.090   2.239  -0.750 H3  C0I 51 
C0I H4  H4  H 0 1 N N N 12.834 39.244 41.940 -7.442  -0.896 -1.926 H4  C0I 52 
C0I H5  H5  H 0 1 N N N 13.485 38.617 43.492 -8.543  0.048  -0.894 H5  C0I 53 
C0I H6  H6  H 0 1 N N N 12.642 41.825 41.583 -7.975  -3.467 -2.224 H6  C0I 54 
C0I H7  H7  H 0 1 N N N 18.108 48.442 38.493 2.732   5.818  -0.723 H7  C0I 55 
C0I H8  H8  H 0 1 N N N 19.814 48.760 36.633 1.270   5.722  -2.708 H8  C0I 56 
C0I H9  H9  H 0 1 N N N 18.105 48.965 36.121 2.481   4.419  -2.776 H9  C0I 57 
C0I H10 H10 H 0 1 N N N 19.858 46.481 35.715 0.193   3.599  -3.356 H10 C0I 58 
C0I H11 H11 H 0 1 N N N 19.297 47.623 34.447 0.830   2.813  -1.891 H11 C0I 59 
C0I H12 H12 H 0 1 N N N 16.920 47.048 35.000 -1.080  5.193  -1.956 H12 C0I 60 
C0I H13 H13 H 0 1 N N N 17.853 45.602 34.484 -1.520  3.516  -1.557 H13 C0I 61 
C0I H14 H14 H 0 1 N N N 16.288 47.391 37.182 0.963   5.687  1.018  H14 C0I 62 
C0I H15 H15 H 0 1 N N N 16.787 46.279 38.502 0.351   6.445  -0.472 H15 C0I 63 
C0I H16 H16 H 0 1 N N N 15.270 45.495 36.341 -2.014  5.688  0.249  H16 C0I 64 
C0I H17 H17 H 0 1 N N N 16.231 44.485 35.208 -1.161  5.110  1.701  H17 C0I 65 
C0I H18 H18 H 0 1 N N N 18.126 41.196 38.318 -3.016  0.927  2.664  H18 C0I 66 
C0I H19 H19 H 0 1 N N N 14.157 44.183 37.939 -3.541  4.241  -0.954 H19 C0I 67 
C0I H20 H20 H 0 1 N N N 14.143 42.280 39.527 -5.073  2.321  -0.832 H20 C0I 68 
C0I H21 H21 H 0 1 N N N 20.270 44.383 40.127 3.303   1.169  -0.113 H21 C0I 69 
C0I H22 H22 H 0 1 N N N 21.511 45.251 39.161 4.326   2.121  0.989  H22 C0I 70 
C0I H23 H23 H 0 1 N N N 20.497 42.489 40.310 6.094   0.360  0.868  H23 C0I 71 
C0I H24 H24 H 0 1 N N N 20.052 41.456 38.909 5.071   -0.592 -0.234 H24 C0I 72 
C0I H25 H25 H 0 1 N N N 15.081 38.253 41.570 -7.487  -0.929 1.126  H25 C0I 73 
C0I H26 H26 H 0 1 N N N 15.784 39.313 42.838 -6.386  -1.873 0.094  H26 C0I 74 
C0I H27 H27 H 0 1 N N N 24.135 39.235 44.541 7.218   -6.073 -0.412 H27 C0I 75 
C0I H28 H28 H 0 1 N N N 23.472 42.837 41.147 5.502   -1.794 -2.221 H28 C0I 76 
C0I H29 H29 H 0 1 N N N 25.058 41.514 44.938 5.428   -6.046 -2.063 H29 C0I 77 
C0I H30 H30 H 0 1 N N N 24.662 43.322 43.250 4.575   -3.925 -2.964 H30 C0I 78 
C0I H31 H31 H 0 1 N N N 21.484 39.052 38.197 9.783   0.122  0.234  H31 C0I 79 
C0I H32 H32 H 0 1 N N N 19.985 39.019 39.187 8.302   0.475  1.152  H32 C0I 80 
C0I H33 H33 H 0 1 N N N 21.132 36.367 42.148 9.565   -3.117 3.011  H33 C0I 81 
C0I H34 H34 H 0 1 N N N 22.410 36.043 40.928 10.677  -3.735 1.770  H34 C0I 82 
C0I H35 H35 H 0 1 N N N 19.475 36.819 40.428 11.507  -1.673 2.981  H35 C0I 83 
C0I H36 H36 H 0 1 N N N 20.331 35.323 39.923 11.408  -1.491 1.212  H36 C0I 84 
C0I H37 H37 H 0 1 N N N 20.089 36.909 38.034 10.423  0.457  2.542  H37 C0I 85 
C0I H38 H38 H 0 1 N N N 21.815 36.664 38.467 9.162   -0.668 3.110  H38 C0I 86 
C0I H39 H39 H 0 1 N N N 13.299 44.333 45.973 -12.257 -4.784 0.124  H39 C0I 87 
C0I H40 H40 H 0 1 N N N 14.453 39.515 45.857 -10.363 -0.299 0.991  H40 C0I 88 
C0I H41 H41 H 0 1 N N N 14.777 40.795 47.917 -12.426 -1.004 2.095  H41 C0I 89 
C0I H42 H42 H 0 1 N N N 14.173 43.252 47.973 -13.370 -3.233 1.666  H42 C0I 90 
C0I H44 H44 H 0 1 N N N 18.858 44.891 37.923 4.033   3.563  -1.421 H44 C0I 91 
C0I H45 H45 H 0 1 N N N 22.214 40.960 38.581 6.864   -0.321 -1.891 H45 C0I 92 
C0I H46 H46 H 0 1 N N N 14.539 41.062 41.129 -6.153  0.851  -0.614 H46 C0I 93 
C0I H47 H47 H 0 1 N N N 12.631 43.825 43.224 -9.943  -4.948 -1.572 H47 C0I 94 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
C0I C04 C03 SING N N 1   
C0I C04 N01 SING N N 2   
C0I C03 C02 SING N N 3   
C0I C07 N01 SING N N 4   
C0I C07 C08 SING N N 5   
C0I C02 C01 SING N N 6   
C0I N01 C05 SING N N 7   
C0I C08 C10 DOUB Y N 8   
C0I C08 C11 SING Y N 9   
C0I C10 C09 SING Y N 10  
C0I C05 C01 SING N N 11  
C0I C01 C06 SING N N 12  
C0I C11 C12 DOUB Y N 13  
C0I C09 C13 DOUB Y N 14  
C0I C15 C14 SING N N 15  
C0I C15 C16 SING N N 16  
C0I N02 C06 SING N N 17  
C0I N02 C14 SING N N 18  
C0I C06 O01 DOUB N N 19  
C0I C36 C33 SING N N 20  
C0I C36 C35 SING N N 21  
C0I C12 C13 SING Y N 22  
C0I C13 C18 SING N N 23  
C0I C33 C27 SING N N 24  
C0I C16 N03 SING N N 25  
C0I N03 C17 SING N N 26  
C0I O02 C18 DOUB N N 27  
C0I C18 N04 SING N N 28  
C0I C35 C34 SING N N 29  
C0I C27 C17 DOUB Y N 30  
C0I C27 C26 SING Y N 31  
C0I C17 C28 SING Y N 32  
C0I N04 C19 SING N N 33  
C0I C34 C26 SING N N 34  
C0I C26 N06 DOUB Y N 35  
C0I C28 C30 DOUB Y N 36  
C0I C28 C25 SING Y N 37  
C0I C30 C32 SING Y N 38  
C0I C19 C20 SING N N 39  
C0I N06 C25 SING Y N 40  
C0I C25 C29 DOUB Y N 41  
C0I C22 C21 DOUB Y N 42  
C0I C22 N05 SING Y N 43  
C0I C20 C21 SING N N 44  
C0I C32 C31 DOUB Y N 45  
C0I C21 C23 SING Y N 46  
C0I N05 C24 SING Y N 47  
C0I C29 C31 SING Y N 48  
C0I C23 C24 DOUB Y N 49  
C0I C23 C38 SING Y N 50  
C0I C24 C37 SING Y N 51  
C0I C38 C39 DOUB Y N 52  
C0I C37 C40 DOUB Y N 53  
C0I C39 C40 SING Y N 54  
C0I C10 H1  SING N N 55  
C0I C15 H2  SING N N 56  
C0I C15 H3  SING N N 57  
C0I C20 H4  SING N N 58  
C0I C20 H5  SING N N 59  
C0I C22 H6  SING N N 60  
C0I C01 H7  SING N N 61  
C0I C02 H8  SING N N 62  
C0I C02 H9  SING N N 63  
C0I C03 H10 SING N N 64  
C0I C03 H11 SING N N 65  
C0I C04 H12 SING N N 66  
C0I C04 H13 SING N N 67  
C0I C05 H14 SING N N 68  
C0I C05 H15 SING N N 69  
C0I C07 H16 SING N N 70  
C0I C07 H17 SING N N 71  
C0I C09 H18 SING N N 72  
C0I C11 H19 SING N N 73  
C0I C12 H20 SING N N 74  
C0I C14 H21 SING N N 75  
C0I C14 H22 SING N N 76  
C0I C16 H23 SING N N 77  
C0I C16 H24 SING N N 78  
C0I C19 H25 SING N N 79  
C0I C19 H26 SING N N 80  
C0I C29 H27 SING N N 81  
C0I C30 H28 SING N N 82  
C0I C31 H29 SING N N 83  
C0I C32 H30 SING N N 84  
C0I C33 H31 SING N N 85  
C0I C33 H32 SING N N 86  
C0I C34 H33 SING N N 87  
C0I C34 H34 SING N N 88  
C0I C35 H35 SING N N 89  
C0I C35 H36 SING N N 90  
C0I C36 H37 SING N N 91  
C0I C36 H38 SING N N 92  
C0I C37 H39 SING N N 93  
C0I C38 H40 SING N N 94  
C0I C39 H41 SING N N 95  
C0I C40 H42 SING N N 96  
C0I N02 H44 SING N N 97  
C0I N03 H45 SING N N 98  
C0I N04 H46 SING N N 99  
C0I N05 H47 SING N N 100 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
C0I InChI            InChI                1.06  "InChI=1S/C40H46N6O2/c47-39(43-23-20-30-25-44-35-13-4-1-10-32(30)35)29-18-16-28(17-19-29)26-46-24-7-9-31(27-46)40(48)42-22-8-21-41-38-33-11-2-5-14-36(33)45-37-15-6-3-12-34(37)38/h1-2,4-5,10-11,13-14,16-19,25,31,44H,3,6-9,12,15,20-24,26-27H2,(H,41,45)(H,42,48)(H,43,47)/t31-/m0/s1" 
C0I InChIKey         InChI                1.06  XQXLUAZIHQBRBM-HKBQPEDESA-N                                                                                                                                                                                                                                                              
C0I SMILES_CANONICAL CACTVS               3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[C@H]4CCCN(C4)Cc5ccc(cc5)C(=O)NCCc6c[nH]c7ccccc67"                                                                                                                                                                                                        
C0I SMILES           CACTVS               3.385 "O=C(NCCCNc1c2CCCCc2nc3ccccc13)[CH]4CCCN(C4)Cc5ccc(cc5)C(=O)NCCc6c[nH]c7ccccc67"                                                                                                                                                                                                         
C0I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CCNC(=O)c3ccc(cc3)CN4CCC[C@@H](C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7"                                                                                                                                                                                                   
C0I SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CCNC(=O)c3ccc(cc3)CN4CCCC(C4)C(=O)NCCCNc5c6ccccc6nc7c5CCCC7"                                                                                                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           C0I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(3~{S})-1-[[4-[2-(1~{H}-indol-3-yl)ethylcarbamoyl]phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
C0I "Create component"  2021-12-14 PDBE 
C0I "Modify descriptor" 2022-08-22 RCSB 
C0I "Initial release"   2022-12-21 RCSB 
# 
