data_A2I
# 
_chem_comp.id                                    A2I 
_chem_comp.name                                  "2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-N-[3-(phenoxymethyl)phenyl]ethanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H21 N3 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-11-15 
_chem_comp.pdbx_modified_date                    2018-10-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        379.475 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A2I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5YQL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A2I C11  C1  C 0 1 Y N N -16.320 -7.558  -21.280 -2.278 -3.297 0.122  C11  A2I 1  
A2I C14  C2  C 0 1 Y N N -16.606 -8.739  -18.793 -2.221 -0.634 0.879  C14  A2I 2  
A2I N15  N1  N 0 1 N N N -16.248 -6.520  -17.720 0.192  -0.702 0.949  N15  A2I 3  
A2I C16  C3  C 0 1 N N N -16.483 -6.951  -16.347 1.266  -1.023 0.200  C16  A2I 4  
A2I C22  C4  C 0 1 Y N N -13.981 -3.422  -18.092 6.028  1.832  0.896  C22  A2I 5  
A2I C23  C5  C 0 1 Y N N -12.843 -2.696  -17.785 7.244  1.682  0.249  C23  A2I 6  
A2I C24  C6  C 0 1 Y N N -12.232 -2.878  -16.550 7.362  0.700  -0.722 C24  A2I 7  
A2I C1   C7  C 0 1 Y N N -12.878 -12.872 -22.044 -8.557 2.323  -0.482 C1   A2I 8  
A2I C2   C8  C 0 1 Y N N -13.819 -12.631 -23.030 -7.798 2.196  -1.631 C2   A2I 9  
A2I C3   C9  C 0 1 Y N N -15.090 -12.214 -22.682 -6.633 1.455  -1.612 C3   A2I 10 
A2I C4   C10 C 0 1 Y N N -15.429 -12.032 -21.347 -6.224 0.837  -0.439 C4   A2I 11 
A2I C5   C11 C 0 1 Y N N -14.482 -12.274 -20.360 -6.987 0.966  0.712  C5   A2I 12 
A2I C6   C12 C 0 1 Y N N -13.209 -12.695 -20.710 -8.151 1.708  0.689  C6   A2I 13 
A2I O7   O1  O 0 1 N N N -16.735 -11.611 -21.047 -5.078 0.107  -0.418 O7   A2I 14 
A2I C8   C13 C 0 1 N N N -16.980 -10.997 -19.807 -4.718 -0.501 0.824  C8   A2I 15 
A2I C9   C14 C 0 1 Y N N -16.703 -9.505  -19.942 -3.429 -1.264 0.656  C9   A2I 16 
A2I C10  C15 C 0 1 Y N N -16.558 -8.916  -21.188 -3.458 -2.594 0.278  C10  A2I 17 
A2I C12  C16 C 0 1 Y N N -16.218 -6.794  -20.130 -1.066 -2.672 0.344  C12  A2I 18 
A2I C13  C17 C 0 1 Y N N -16.366 -7.381  -18.885 -1.034 -1.337 0.724  C13  A2I 19 
A2I O17  O2  O 0 1 N N N -16.812 -8.058  -16.070 1.192  -1.921 -0.612 O17  A2I 20 
A2I C18  C18 C 0 1 N N N -16.324 -5.910  -15.237 2.558  -0.267 0.372  C18  A2I 21 
A2I S19  S1  S 0 1 N N N -14.565 -5.609  -14.859 3.800  -0.928 -0.766 S19  A2I 22 
A2I C20  C19 C 0 1 Y N N -13.842 -4.416  -16.024 5.167  0.108  -0.363 C20  A2I 23 
A2I N21  N2  N 0 1 Y N N -14.443 -4.262  -17.187 5.021  1.038  0.570  N21  A2I 24 
A2I N25  N3  N 0 1 Y N N -12.747 -3.744  -15.690 6.317  -0.061 -1.001 N25  A2I 25 
A2I C26  C20 C 0 1 N N N -10.970 -2.085  -16.206 8.666  0.502  -1.452 C26  A2I 26 
A2I C27  C21 C 0 1 N N N -14.702 -3.276  -19.436 5.855  2.882  1.963  C27  A2I 27 
A2I H111 H1  H 0 0 N N N -16.214 -7.093  -22.249 -2.304 -4.337 -0.169 H111 A2I 28 
A2I H141 H2  H 0 0 N N N -16.718 -9.203  -17.824 -2.199 0.405  1.174  H141 A2I 29 
A2I H151 H3  H 0 0 N N N -15.988 -5.566  -17.870 0.270  -0.030 1.645  H151 A2I 30 
A2I H231 H4  H 0 0 N N N -12.434 -1.995  -18.498 8.082  2.317  0.496  H231 A2I 31 
A2I H011 H5  H 0 0 N N N -11.885 -13.198 -22.315 -9.465 2.907  -0.497 H011 A2I 32 
A2I H021 H6  H 0 0 N N N -13.561 -12.769 -24.070 -8.117 2.678  -2.543 H021 A2I 33 
A2I H031 H7  H 0 0 N N N -15.824 -12.029 -23.452 -6.041 1.356  -2.510 H031 A2I 34 
A2I H051 H8  H 0 0 N N N -14.738 -12.134 -19.320 -6.670 0.486  1.627  H051 A2I 35 
A2I H061 H9  H 0 0 N N N -12.474 -12.885 -19.942 -8.743 1.812  1.586  H061 A2I 36 
A2I H082 H10 H 0 0 N N N -18.029 -11.155 -19.516 -4.587 0.271  1.582  H082 A2I 37 
A2I H081 H11 H 0 0 N N N -16.318 -11.429 -19.042 -5.508 -1.186 1.136  H081 A2I 38 
A2I H101 H12 H 0 0 N N N -16.631 -9.516  -22.083 -4.404 -3.084 0.104  H101 A2I 39 
A2I H121 H13 H 0 0 N N N -16.022 -5.735  -20.205 -0.144 -3.222 0.222  H121 A2I 40 
A2I H182 H14 H 0 0 N N N -16.788 -4.967  -15.561 2.393  0.789  0.156  H182 A2I 41 
A2I H181 H15 H 0 0 N N N -16.829 -6.274  -14.330 2.910  -0.377 1.398  H181 A2I 42 
A2I H261 H16 H 0 0 N N N -10.625 -2.363  -15.199 9.279  -0.219 -0.911 H261 A2I 43 
A2I H263 H17 H 0 0 N N N -10.183 -2.313  -16.939 8.467  0.128  -2.456 H263 A2I 44 
A2I H262 H18 H 0 0 N N N -11.195 -1.009  -16.232 9.194  1.453  -1.516 H262 A2I 45 
A2I H273 H19 H 0 0 N N N -15.574 -3.946  -19.460 5.517  3.812  1.506  H273 A2I 46 
A2I H271 H20 H 0 0 N N N -15.036 -2.235  -19.562 5.116  2.544  2.690  H271 A2I 47 
A2I H272 H21 H 0 0 N N N -14.014 -3.541  -20.252 6.808  3.049  2.466  H272 A2I 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A2I C2  C3   DOUB Y N 1  
A2I C2  C1   SING Y N 2  
A2I C3  C4   SING Y N 3  
A2I C1  C6   DOUB Y N 4  
A2I C4  O7   SING N N 5  
A2I C4  C5   DOUB Y N 6  
A2I C11 C10  DOUB Y N 7  
A2I C11 C12  SING Y N 8  
A2I C10 C9   SING Y N 9  
A2I O7  C8   SING N N 10 
A2I C6  C5   SING Y N 11 
A2I C12 C13  DOUB Y N 12 
A2I C9  C8   SING N N 13 
A2I C9  C14  DOUB Y N 14 
A2I C27 C22  SING N N 15 
A2I C13 C14  SING Y N 16 
A2I C13 N15  SING N N 17 
A2I C22 C23  DOUB Y N 18 
A2I C22 N21  SING Y N 19 
A2I C23 C24  SING Y N 20 
A2I N15 C16  SING N N 21 
A2I N21 C20  DOUB Y N 22 
A2I C24 C26  SING N N 23 
A2I C24 N25  DOUB Y N 24 
A2I C16 O17  DOUB N N 25 
A2I C16 C18  SING N N 26 
A2I C20 N25  SING Y N 27 
A2I C20 S19  SING N N 28 
A2I C18 S19  SING N N 29 
A2I C11 H111 SING N N 30 
A2I C14 H141 SING N N 31 
A2I N15 H151 SING N N 32 
A2I C23 H231 SING N N 33 
A2I C1  H011 SING N N 34 
A2I C2  H021 SING N N 35 
A2I C3  H031 SING N N 36 
A2I C5  H051 SING N N 37 
A2I C6  H061 SING N N 38 
A2I C8  H082 SING N N 39 
A2I C8  H081 SING N N 40 
A2I C10 H101 SING N N 41 
A2I C12 H121 SING N N 42 
A2I C18 H182 SING N N 43 
A2I C18 H181 SING N N 44 
A2I C26 H261 SING N N 45 
A2I C26 H263 SING N N 46 
A2I C26 H262 SING N N 47 
A2I C27 H273 SING N N 48 
A2I C27 H271 SING N N 49 
A2I C27 H272 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A2I InChI            InChI                1.03  "InChI=1S/C21H21N3O2S/c1-15-11-16(2)23-21(22-15)27-14-20(25)24-18-8-6-7-17(12-18)13-26-19-9-4-3-5-10-19/h3-12H,13-14H2,1-2H3,(H,24,25)" 
A2I InChIKey         InChI                1.03  UTHZHWWWTOWRMG-UHFFFAOYSA-N                                                                                                             
A2I SMILES_CANONICAL CACTVS               3.385 "Cc1cc(C)nc(SCC(=O)Nc2cccc(COc3ccccc3)c2)n1"                                                                                            
A2I SMILES           CACTVS               3.385 "Cc1cc(C)nc(SCC(=O)Nc2cccc(COc3ccccc3)c2)n1"                                                                                            
A2I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(nc(n1)SCC(=O)Nc2cccc(c2)COc3ccccc3)C"                                                                                            
A2I SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(nc(n1)SCC(=O)Nc2cccc(c2)COc3ccccc3)C"                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A2I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-~{N}-[3-(phenoxymethyl)phenyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A2I "Create component" 2017-11-15 RCSB 
A2I "Initial release"  2018-10-17 RCSB 
# 
