data_5BI
# 
_chem_comp.id                                    5BI 
_chem_comp.name                                  "methyl 3-O-(4-methylbenzoyl)-2-O-[2-nitro-4-(trifluoromethyl)benzoyl]-beta-D-talopyranoside" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H22 F3 N O10" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-16 
_chem_comp.pdbx_modified_date                    2022-07-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        529.417 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5BI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RH0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5BI N1  N1  N 1  1 N N N 16.176 -13.049 0.413  -1.980 1.737  -2.026 N1  5BI 1  
5BI C6  C1  C 0  1 N N N 20.275 -5.759  -0.219 2.114  -4.223 2.271  C6  5BI 2  
5BI C2  C2  C 0  1 N N S 18.841 -9.401  -1.955 1.254  -1.704 -1.075 C2  5BI 3  
5BI O2  O1  O 0  1 N N N 18.638 -10.161 -0.738 0.084  -1.169 -0.401 O2  5BI 4  
5BI C4  C3  C 0  1 N N S 18.243 -7.096  -1.057 2.427  -2.036 1.101  C4  5BI 5  
5BI O4  O2  O 0  1 N N N 17.940 -7.397  0.316  1.307  -1.519 1.822  O4  5BI 6  
5BI C5  C4  C 0  1 N N R 19.728 -6.732  -1.216 2.258  -3.545 0.907  C5  5BI 7  
5BI O5  O3  O 0  1 N N N 20.558 -7.897  -1.076 1.087  -3.796 0.123  O5  5BI 8  
5BI C1  C5  C 0  1 N N R 20.258 -8.874  -2.061 1.129  -3.226 -1.186 C1  5BI 9  
5BI O1  O4  O 0  1 N N N 21.161 -9.946  -1.957 -0.071 -3.556 -1.889 O1  5BI 10 
5BI C7  C6  C 0  1 N N N 22.425 -9.632  -2.506 -0.228 -4.952 -2.147 C7  5BI 11 
5BI C8  C7  C 0  1 N N N 18.276 -11.455 -0.875 -0.961 -0.819 -1.175 C8  5BI 12 
5BI C3  C8  C 0  1 N N S 17.875 -8.227  -2.037 2.510  -1.359 -0.270 C3  5BI 13 
5BI O3  O5  O 0  1 N N N 16.534 -8.733  -1.911 2.596  0.080  -0.097 O3  5BI 14 
5BI C9  C9  C 0  1 N N N 15.550 -8.067  -2.532 3.830  0.611  0.002  C9  5BI 15 
5BI O6  O6  O 0  1 N N N 21.672 -5.488  -0.481 2.072  -5.641 2.097  O6  5BI 16 
5BI O8  O7  O 0  1 N N N 15.715 -7.041  -3.100 4.808  -0.108 -0.054 O8  5BI 17 
5BI O7  O8  O 0  1 N N N 17.744 -11.918 -1.843 -0.897 -0.956 -2.381 O7  5BI 18 
5BI CA1 C10 C 0  1 Y N N 18.537 -12.277 0.326  -2.185 -0.268 -0.559 CA1 5BI 19 
5BI CB1 C11 C 0  1 Y N N 14.247 -8.774  -2.447 3.995  2.069  0.180  CB1 5BI 20 
5BI CB2 C12 C 0  1 Y N N 13.098 -8.223  -3.006 2.873  2.897  0.252  CB2 5BI 21 
5BI CB6 C13 C 0  1 Y N N 14.150 -10.005 -1.813 5.272  2.623  0.283  CB6 5BI 22 
5BI CB3 C14 C 0  1 Y N N 11.884 -8.882  -2.906 3.034  4.257  0.418  CB3 5BI 23 
5BI CB5 C15 C 0  1 Y N N 12.927 -10.649 -1.716 5.418  3.984  0.450  CB5 5BI 24 
5BI CB4 C16 C 0  1 Y N N 11.778 -10.094 -2.240 4.303  4.801  0.514  CB4 5BI 25 
5BI C10 C17 C 0  1 N N N 10.444 -10.763 -2.049 4.470  6.287  0.696  C10 5BI 26 
5BI CA6 C18 C 0  1 Y N N 19.808 -12.318 0.892  -2.849 -0.980 0.442  CA6 5BI 27 
5BI CA2 C19 C 0  1 Y N N 17.577 -13.134 0.855  -2.681 0.971  -0.970 CA2 5BI 28 
5BI CA5 C20 C 0  1 Y N N 20.089 -13.167 1.951  -3.991 -0.460 1.014  CA5 5BI 29 
5BI CA3 C21 C 0  1 Y N N 17.839 -13.997 1.898  -3.824 1.480  -0.390 CA3 5BI 30 
5BI CA4 C22 C 0  1 Y N N 19.106 -13.996 2.473  -4.479 0.766  0.597  CA4 5BI 31 
5BI C11 C23 C 0  1 N N N 19.373 -14.812 3.689  -5.728 1.329  1.227  C11 5BI 32 
5BI ON1 O9  O 0  1 N N N 15.833 -12.114 -0.291 -0.912 1.342  -2.457 ON1 5BI 33 
5BI ON2 O10 O -1 1 N N N 15.426 -13.957 0.700  -2.476 2.758  -2.468 ON2 5BI 34 
5BI F1  F1  F 0  1 N N N 18.513 -15.755 3.818  -6.204 0.438  2.195  F1  5BI 35 
5BI F2  F2  F 0  1 N N N 19.371 -14.068 4.828  -5.434 2.558  1.828  F2  5BI 36 
5BI F3  F3  F 0  1 N N N 20.536 -15.424 3.634  -6.704 1.513  0.242  F3  5BI 37 
5BI H1  H1  H 0  1 N N N 19.707 -4.819  -0.283 2.964  -3.959 2.900  H1  5BI 38 
5BI H2  H2  H 0  1 N N N 20.173 -6.182  0.791  1.192  -3.889 2.748  H2  5BI 39 
5BI H3  H3  H 0  1 N N N 18.655 -10.055 -2.820 1.329  -1.271 -2.072 H3  5BI 40 
5BI H4  H4  H 0  1 N N N 17.660 -6.211  -1.353 3.342  -1.840 1.661  H4  5BI 41 
5BI H5  H5  H 0  1 N N N 18.190 -6.663  0.864  1.192  -1.906 2.701  H5  5BI 42 
5BI H6  H6  H 0  1 N N N 19.866 -6.310  -2.223 3.132  -3.945 0.393  H6  5BI 43 
5BI H7  H7  H 0  1 N N N 20.365 -8.415  -3.055 1.988  -3.622 -1.728 H7  5BI 44 
5BI H8  H8  H 0  1 N N N 23.096 -10.498 -2.402 -0.249 -5.496 -1.203 H8  5BI 45 
5BI H9  H9  H 0  1 N N N 22.310 -9.383  -3.571 -1.163 -5.119 -2.683 H9  5BI 46 
5BI H10 H10 H 0  1 N N N 22.853 -8.771  -1.972 0.606  -5.306 -2.753 H10 5BI 47 
5BI H11 H11 H 0  1 N N N 17.977 -7.806  -3.048 3.393  -1.716 -0.801 H11 5BI 48 
5BI H12 H12 H 0  1 N N N 22.001 -4.870  0.161  1.982  -6.136 2.922  H12 5BI 49 
5BI H13 H13 H 0  1 N N N 13.153 -7.275  -3.521 1.882  2.475  0.176  H13 5BI 50 
5BI H14 H14 H 0  1 N N N 15.033 -10.464 -1.393 6.143  1.987  0.233  H14 5BI 51 
5BI H15 H15 H 0  1 N N N 11.004 -8.444  -3.355 2.167  4.899  0.473  H15 5BI 52 
5BI H16 H16 H 0  1 N N N 12.872 -11.606 -1.219 6.406  4.415  0.530  H16 5BI 53 
5BI H17 H17 H 0  1 N N N 10.252 -11.446 -2.890 4.486  6.524  1.760  H17 5BI 54 
5BI H18 H18 H 0  1 N N N 10.451 -11.333 -1.108 5.407  6.606  0.240  H18 5BI 55 
5BI H19 H19 H 0  1 N N N 9.653  -9.999  -2.009 3.639  6.807  0.220  H19 5BI 56 
5BI H20 H20 H 0  1 N N N 20.586 -11.679 0.501  -2.468 -1.938 0.767  H20 5BI 57 
5BI H21 H21 H 0  1 N N N 21.083 -13.184 2.374  -4.505 -1.010 1.788  H21 5BI 58 
5BI H22 H22 H 0  1 N N N 17.072 -14.664 2.263  -4.208 2.439  -0.707 H22 5BI 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5BI O8  C9  DOUB N N 1  
5BI CB2 CB3 DOUB Y N 2  
5BI CB2 CB1 SING Y N 3  
5BI CB3 CB4 SING Y N 4  
5BI C9  CB1 SING N N 5  
5BI C9  O3  SING N N 6  
5BI C7  O1  SING N N 7  
5BI CB1 CB6 DOUB Y N 8  
5BI CB4 C10 SING N N 9  
5BI CB4 CB5 DOUB Y N 10 
5BI C1  O1  SING N N 11 
5BI C1  C2  SING N N 12 
5BI C1  O5  SING N N 13 
5BI C3  C2  SING N N 14 
5BI C3  O3  SING N N 15 
5BI C3  C4  SING N N 16 
5BI C2  O2  SING N N 17 
5BI O7  C8  DOUB N N 18 
5BI CB6 CB5 SING Y N 19 
5BI C5  O5  SING N N 20 
5BI C5  C4  SING N N 21 
5BI C5  C6  SING N N 22 
5BI C4  O4  SING N N 23 
5BI C8  O2  SING N N 24 
5BI C8  CA1 SING N N 25 
5BI O6  C6  SING N N 26 
5BI ON1 N1  DOUB N N 27 
5BI CA1 CA2 DOUB Y N 28 
5BI CA1 CA6 SING Y N 29 
5BI N1  ON2 SING N N 30 
5BI N1  CA2 SING N N 31 
5BI CA2 CA3 SING Y N 32 
5BI CA6 CA5 DOUB Y N 33 
5BI CA3 CA4 DOUB Y N 34 
5BI CA5 CA4 SING Y N 35 
5BI CA4 C11 SING N N 36 
5BI F3  C11 SING N N 37 
5BI C11 F1  SING N N 38 
5BI C11 F2  SING N N 39 
5BI C6  H1  SING N N 40 
5BI C6  H2  SING N N 41 
5BI C2  H3  SING N N 42 
5BI C4  H4  SING N N 43 
5BI O4  H5  SING N N 44 
5BI C5  H6  SING N N 45 
5BI C1  H7  SING N N 46 
5BI C7  H8  SING N N 47 
5BI C7  H9  SING N N 48 
5BI C7  H10 SING N N 49 
5BI C3  H11 SING N N 50 
5BI O6  H12 SING N N 51 
5BI CB2 H13 SING N N 52 
5BI CB6 H14 SING N N 53 
5BI CB3 H15 SING N N 54 
5BI CB5 H16 SING N N 55 
5BI C10 H17 SING N N 56 
5BI C10 H18 SING N N 57 
5BI C10 H19 SING N N 58 
5BI CA6 H20 SING N N 59 
5BI CA5 H21 SING N N 60 
5BI CA3 H22 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5BI SMILES           ACDLabs              12.01 "COC1OC(CO)C(O)C(OC(=O)c2ccc(C)cc2)C1OC(=O)c1ccc(cc1[N+]([O-])=O)C(F)(F)F"                                                                                                                         
5BI InChI            InChI                1.03  "InChI=1S/C23H22F3NO10/c1-11-3-5-12(6-4-11)20(30)36-18-17(29)16(10-28)35-22(34-2)19(18)37-21(31)14-8-7-13(23(24,25)26)9-15(14)27(32)33/h3-9,16-19,22,28-29H,10H2,1-2H3/t16-,17+,18+,19+,22-/m1/s1" 
5BI InChIKey         InChI                1.03  VLBBOLJDXZIPOG-NOYKIMNZSA-N                                                                                                                                                                        
5BI SMILES_CANONICAL CACTVS               3.385 "CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](OC(=O)c2ccc(C)cc2)[C@@H]1OC(=O)c3ccc(cc3[N+]([O-])=O)C(F)(F)F"                                                                                                   
5BI SMILES           CACTVS               3.385 "CO[CH]1O[CH](CO)[CH](O)[CH](OC(=O)c2ccc(C)cc2)[CH]1OC(=O)c3ccc(cc3[N+]([O-])=O)C(F)(F)F"                                                                                                          
5BI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C(=O)O[C@H]2[C@H]([C@H](O[C@H]([C@H]2OC(=O)c3ccc(cc3[N+](=O)[O-])C(F)(F)F)OC)CO)O"                                                                                                     
5BI SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C(=O)OC2C(C(OC(C2OC(=O)c3ccc(cc3[N+](=O)[O-])C(F)(F)F)OC)CO)O"                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5BI "SYSTEMATIC NAME" ACDLabs              12.01 "methyl 3-O-(4-methylbenzoyl)-2-O-[2-nitro-4-(trifluoromethyl)benzoyl]-beta-D-talopyranoside"                                                          
5BI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-4-(4-methylphenyl)carbonyloxy-5-oxidanyl-oxan-3-yl] 2-nitro-4-(trifluoromethyl)benzoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5BI "Create component" 2021-07-16 RCSB 
5BI "Initial release"  2022-07-13 RCSB 
# 
