data_4SI
#

_chem_comp.id                                   4SI
_chem_comp.name                                 "4'-chloro-3'-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl][1,1'-biphenyl]-4-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H22 Cl N5 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-07-14
_chem_comp.pdbx_modified_date                   2022-05-20
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       419.907
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4SI
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7REG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4SI  C14   C1   C   0  1  Y  N  N  86.939  -12.284  -2.165  -0.032  -2.482   0.414  C14   4SI   1  
4SI  C11   C2   C   0  1  N  N  N  90.437  -11.753  -1.770  -2.691  -0.282   0.562  C11   4SI   2  
4SI  C10   C3   C   0  1  Y  N  N  91.950  -11.875  -1.885  -3.434   0.892   0.216  C10   4SI   3  
4SI  C12   C4   C   0  1  N  N  N  89.279  -11.628  -1.588  -2.081  -1.244   0.845  C12   4SI   4  
4SI  C13   C5   C   0  1  N  N  S  87.806  -11.424  -1.256  -1.317  -2.451   1.201  C13   4SI   5  
4SI  C01   C6   C   0  1  N  N  N  91.807  -14.394  -4.342  -1.840   0.742  -2.680  C01   4SI   6  
4SI  C02   C7   C   0  1  N  N  N  91.775  -12.865  -4.238  -1.621   1.556  -1.403  C02   4SI   7  
4SI  C03   C8   C   0  1  Y  N  N  92.573  -12.389  -3.019  -2.946   1.797  -0.728  C03   4SI   8  
4SI  C05   C9   C   0  1  Y  N  N  94.585  -12.059  -1.999  -4.830   3.094  -0.434  C05   4SI   9  
4SI  C08   C10  C   0  1  Y  N  N  92.746  -11.450  -0.819  -4.681   1.161   0.814  C08   4SI  10  
4SI  C15   C11  C   0  1  Y  N  N  87.306  -13.600  -2.407   0.882  -1.457   0.546  C15   4SI  11  
4SI  C16   C12  C   0  1  Y  N  N  86.499  -14.370  -3.228   2.070  -1.487  -0.183  C16   4SI  12  
4SI  C17   C13  C   0  1  Y  N  N  86.882  -15.809  -3.541   3.055  -0.388  -0.044  C17   4SI  13  
4SI  C18   C14  C   0  1  Y  N  N  85.902  -16.776  -3.705   4.243  -0.421  -0.775  C18   4SI  14  
4SI  C19   C15  C   0  1  Y  N  N  86.278  -18.069  -4.014   5.159   0.599  -0.646  C19   4SI  15  
4SI  C20   C16  C   0  1  Y  N  N  87.621  -18.370  -4.160   4.899   1.667   0.216  C20   4SI  16  
4SI  C21   C17  C   0  1  N  N  N  88.036  -19.786  -4.514   5.881   2.761   0.354  C21   4SI  17  
4SI  C24   C18  C   0  1  Y  N  N  88.599  -17.403  -4.011   3.709   1.699   0.947  C24   4SI  18  
4SI  C25   C19  C   0  1  Y  N  N  88.223  -16.110  -3.704   2.792   0.681   0.813  C25   4SI  19  
4SI  C26   C20  C   0  1  Y  N  N  85.365  -13.835  -3.815   2.328  -2.554  -1.042  C26   4SI  20  
4SI  C27   C21  C   0  1  Y  N  N  85.003  -12.521  -3.566   1.408  -3.574  -1.167  C27   4SI  21  
4SI  C28   C22  C   0  1  Y  N  N  85.800  -11.747  -2.741   0.232  -3.542  -0.437  C28   4SI  22  
4SI  C30   C23  C   0  1  N  N  N  87.620  -11.790   0.216  -0.998  -2.430   2.697  C30   4SI  23  
4SI  N04   N1   N   0  1  Y  N  N  93.884  -12.466  -3.049  -3.662   2.870  -1.021  N04   4SI  24  
4SI  N06   N2   N   0  1  N  N  N  96.013  -12.162  -2.045  -5.543   4.230  -0.774  N06   4SI  25  
4SI  N07   N3   N   0  1  Y  N  N  94.047  -11.552  -0.906  -5.336   2.261   0.463  N07   4SI  26  
4SI  N09   N4   N   0  1  N  N  N  92.177  -10.910   0.398  -5.214   0.294   1.751  N09   4SI  27  
4SI  N22   N5   N   0  1  N  N  N  87.587  -20.912  -3.719   5.629   3.792   1.185  N22   4SI  28  
4SI  O23   O1   O   0  1  N  N  N  88.720  -19.941  -5.472   6.916   2.734  -0.283  O23   4SI  29  
4SI  CL29  CL1  CL  0  0  N  N  N  85.361  -10.057  -2.403  -0.922  -4.829  -0.599  CL29  4SI  30  
4SI  H1    H1   H   0  1  N  N  N  87.545  -10.365  -1.401  -1.907  -3.337   0.968  H1    4SI  31  
4SI  H2    H2   H   0  1  N  N  N  91.230  -14.714  -5.222  -2.497   1.293  -3.354  H2    4SI  32  
4SI  H3    H3   H   0  1  N  N  N  92.849  -14.733  -4.444  -0.882   0.568  -3.169  H3    4SI  33  
4SI  H4    H4   H   0  1  N  N  N  91.366  -14.832  -3.435  -2.299  -0.214  -2.428  H4    4SI  34  
4SI  H5    H5   H   0  1  N  N  N  92.214  -12.432  -5.149  -0.965   1.005  -0.730  H5    4SI  35  
4SI  H6    H6   H   0  1  N  N  N  90.731  -12.531  -4.139  -1.162   2.512  -1.656  H6    4SI  36  
4SI  H7    H7   H   0  1  N  N  N  88.200  -14.014  -1.965   0.677  -0.632   1.213  H7    4SI  37  
4SI  H8    H8   H   0  1  N  N  N  84.858  -16.522  -3.593   4.445  -1.247  -1.441  H8    4SI  38  
4SI  H9    H9   H   0  1  N  N  N  85.530  -18.838  -4.141   6.079   0.573  -1.212  H9    4SI  39  
4SI  H10   H10  H   0  1  N  N  N  89.642  -17.656  -4.133   3.506   2.524   1.614  H10   4SI  40  
4SI  H11   H11  H   0  1  N  N  N  88.971  -15.339  -3.592   1.872   0.706   1.378  H11   4SI  41  
4SI  H12   H12  H   0  1  N  N  N  84.760  -14.445  -4.470   3.245  -2.580  -1.612  H12   4SI  42  
4SI  H13   H13  H   0  1  N  N  N  84.110  -12.106  -4.010   1.607  -4.401  -1.833  H13   4SI  43  
4SI  H14   H14  H   0  1  N  N  N  88.261  -11.148   0.838  -0.432  -3.324   2.961  H14   4SI  44  
4SI  H15   H15  H   0  1  N  N  N  86.568  -11.642   0.500  -0.407  -1.544   2.930  H15   4SI  45  
4SI  H16   H16  H   0  1  N  N  N  87.897  -12.844   0.370  -1.927  -2.408   3.266  H16   4SI  46  
4SI  H17   H17  H   0  1  N  N  N  96.291  -12.553  -2.922  -6.401   4.406  -0.356  H17   4SI  47  
4SI  H18   H18  H   0  1  N  N  N  96.416  -11.253  -1.942  -5.186   4.849  -1.429  H18   4SI  48  
4SI  H19   H19  H   0  1  N  N  N  92.912  -10.679   1.036  -4.728  -0.507   2.001  H19   4SI  49  
4SI  H20   H20  H   0  1  N  N  N  91.651  -10.087   0.183  -6.073   0.488   2.157  H20   4SI  50  
4SI  H21   H21  H   0  1  N  N  N  87.853  -21.842  -3.974   4.803   3.814   1.693  H21   4SI  51  
4SI  H22   H22  H   0  1  N  N  N  87.011  -20.759  -2.916   6.274   4.511   1.276  H22   4SI  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4SI  O23  C21   DOUB  N  N   1  
4SI  C21  C20   SING  N  N   2  
4SI  C21  N22   SING  N  N   3  
4SI  C01  C02   SING  N  N   4  
4SI  C02  C03   SING  N  N   5  
4SI  C20  C19   DOUB  Y  N   6  
4SI  C20  C24   SING  Y  N   7  
4SI  C19  C18   SING  Y  N   8  
4SI  C24  C25   DOUB  Y  N   9  
4SI  C26  C27   DOUB  Y  N  10  
4SI  C26  C16   SING  Y  N  11  
4SI  C18  C17   DOUB  Y  N  12  
4SI  C25  C17   SING  Y  N  13  
4SI  C27  C28   SING  Y  N  14  
4SI  C17  C16   SING  N  N  15  
4SI  C16  C15   DOUB  Y  N  16  
4SI  N04  C03   DOUB  Y  N  17  
4SI  N04  C05   SING  Y  N  18  
4SI  C03  C10   SING  Y  N  19  
4SI  C28  CL29  SING  N  N  20  
4SI  C28  C14   DOUB  Y  N  21  
4SI  C15  C14   SING  Y  N  22  
4SI  C14  C13   SING  N  N  23  
4SI  N06  C05   SING  N  N  24  
4SI  C05  N07   DOUB  Y  N  25  
4SI  C10  C11   SING  N  N  26  
4SI  C10  C08   DOUB  Y  N  27  
4SI  C11  C12   TRIP  N  N  28  
4SI  C12  C13   SING  N  N  29  
4SI  C13  C30   SING  N  N  30  
4SI  N07  C08   SING  Y  N  31  
4SI  C08  N09   SING  N  N  32  
4SI  C13  H1    SING  N  N  33  
4SI  C01  H2    SING  N  N  34  
4SI  C01  H3    SING  N  N  35  
4SI  C01  H4    SING  N  N  36  
4SI  C02  H5    SING  N  N  37  
4SI  C02  H6    SING  N  N  38  
4SI  C15  H7    SING  N  N  39  
4SI  C18  H8    SING  N  N  40  
4SI  C19  H9    SING  N  N  41  
4SI  C24  H10   SING  N  N  42  
4SI  C25  H11   SING  N  N  43  
4SI  C26  H12   SING  N  N  44  
4SI  C27  H13   SING  N  N  45  
4SI  C30  H14   SING  N  N  46  
4SI  C30  H15   SING  N  N  47  
4SI  C30  H16   SING  N  N  48  
4SI  N06  H17   SING  N  N  49  
4SI  N06  H18   SING  N  N  50  
4SI  N09  H19   SING  N  N  51  
4SI  N09  H20   SING  N  N  52  
4SI  N22  H21   SING  N  N  53  
4SI  N22  H22   SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4SI  SMILES            ACDLabs               12.01  "CCc1nc(N)nc(N)c1C#CC(C)c1cc(ccc1Cl)c1ccc(cc1)C(N)=O"  
4SI  InChI             InChI                 1.03   "InChI=1S/C23H22ClN5O/c1-3-20-17(21(25)29-23(27)28-20)10-4-13(2)18-12-16(9-11-19(18)24)14-5-7-15(8-6-14)22(26)30/h5-9,11-13H,3H2,1-2H3,(H2,26,30)(H4,25,27,28,29)/t13-/m0/s1"  
4SI  InChIKey          InChI                 1.03   LTCWEPCGQPOIRQ-ZDUSSCGKSA-N  
4SI  SMILES_CANONICAL  CACTVS                3.385  "CCc1nc(N)nc(N)c1C#C[C@H](C)c2cc(ccc2Cl)c3ccc(cc3)C(N)=O"  
4SI  SMILES            CACTVS                3.385  "CCc1nc(N)nc(N)c1C#C[CH](C)c2cc(ccc2Cl)c3ccc(cc3)C(N)=O"  
4SI  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(n1)N)N)C#C[C@H](C)c2cc(ccc2Cl)c3ccc(cc3)C(=O)N"  
4SI  SMILES            "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(n1)N)N)C#CC(C)c2cc(ccc2Cl)c3ccc(cc3)C(=O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4SI  "SYSTEMATIC NAME"  ACDLabs               12.01  "4'-chloro-3'-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl][1,1'-biphenyl]-4-carboxamide"  
4SI  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "4-[3-[(2~{S})-4-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]but-3-yn-2-yl]-4-chloranyl-phenyl]benzamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4SI  "Create component"  2021-07-14  RCSB  
4SI  "Initial release"   2022-05-25  RCSB  
##
