data_46I
# 
_chem_comp.id                                    46I 
_chem_comp.name                                  "beta-D-glucopyranosyl 1,3,4,6-tetrakisphosphate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H16 O18 P4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "[(2S,3R,4R,5R,6R)-3-oxidanyl-2,5-diphosphonooxy-6-(phosphonooxymethyl)oxan-4-yl] dihydrogen phosphate" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-07-12 
_chem_comp.pdbx_modified_date                    2024-02-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        500.075 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     46I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PPG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
46I C1  C1  C 0 1 N N S N N N 10.930 29.329 83.894 0.764  1.940  -0.112 C1  46I 1  
46I C2  C2  C 0 1 N N R N N N 10.860 29.493 85.407 -0.674 2.013  -0.630 C2  46I 2  
46I C3  C3  C 0 1 N N R N N N 12.259 29.353 85.979 -1.501 0.901  0.024  C3  46I 3  
46I C4  C4  C 0 1 N N R N N N 12.762 27.993 85.584 -0.844 -0.451 -0.272 C4  46I 4  
46I C5  C5  C 0 1 N N R N N N 12.872 27.973 84.074 0.601  -0.428 0.231  C5  46I 5  
46I C6  C6  C 0 1 N N N N N N 13.443 26.696 83.538 1.282  -1.754 -0.114 C6  46I 6  
46I O2  O1  O 0 1 N N N N N N 10.296 30.756 85.733 -1.237 3.284  -0.300 O2  46I 7  
46I O5  O2  O 0 1 N N N N N N 11.547 28.099 83.534 1.305  0.647  -0.393 O5  46I 8  
46I O6  O3  O 0 1 N N N N N N 13.449 26.868 82.112 2.592  -1.779 0.457  O6  46I 9  
46I O01 O4  O 0 1 N N N N N N 9.700  29.312 83.333 1.555  2.938  -0.760 O01 46I 10 
46I O04 O5  O 0 1 N N N N N N 10.110 28.997 80.957 3.777  2.604  0.390  O04 46I 11 
46I O03 O6  O 0 1 N N N N N N 7.753  29.550 81.653 3.549  4.613  -1.121 O03 46I 12 
46I O02 O7  O 0 1 N N N N N N 9.564  31.287 81.889 2.329  4.504  1.205  O02 46I 13 
46I P1  P1  P 0 1 N N N N N N 9.224  29.815 81.873 2.823  3.642  -0.062 P1  46I 14 
46I O11 O8  O 0 1 N N N N N N 14.187 25.855 87.638 -3.095 -3.611 0.658  O11 46I 15 
46I O12 O9  O 0 1 N N N N N N 15.040 28.113 88.440 -1.136 -3.612 -1.095 O12 46I 16 
46I O08 O10 O 0 1 N N N N N N 12.260 29.444 87.412 -2.827 0.915  -0.508 O08 46I 17 
46I P4  P2  P 0 1 N N N N N N 14.983 27.098 87.315 -2.266 -2.710 -0.387 P4  46I 18 
46I O05 O11 O 0 1 N N N N N N 12.233 30.043 89.899 -4.296 -0.087 1.429  O05 46I 19 
46I O06 O12 O 0 1 N N N N N N 11.410 31.580 88.048 -3.993 2.405  1.163  O06 46I 20 
46I O10 O13 O 0 1 N N N N N N 16.336 26.819 86.689 -3.186 -2.176 -1.416 O10 46I 21 
46I O09 O14 O 0 1 N N N N N N 14.036 27.779 86.195 -1.566 -1.488 0.394  O09 46I 22 
46I O07 O15 O 0 1 N N N N N N 13.882 31.107 88.305 -5.437 1.229  -0.541 O07 46I 23 
46I P3  P3  P 0 1 N N N N N N 12.472 30.601 88.518 -4.135 1.143  0.402  P3  46I 24 
46I P6  P4  P 0 1 N N N N N N 14.869 27.240 81.419 3.596  -3.027 0.293  P6  46I 25 
46I O16 O16 O 0 1 N N N N N N 15.892 26.209 81.858 4.000  -3.191 -1.257 O16 46I 26 
46I O17 O17 O 0 1 N N N N N N 15.214 28.625 81.917 4.922  -2.768 1.169  O17 46I 27 
46I O18 O18 O 0 1 N N N N N N 14.577 27.183 79.930 2.928  -4.262 0.761  O18 46I 28 
46I H1  H1  H 0 1 N N N N N N 11.522 30.163 83.490 0.773  2.111  0.964  H1  46I 29 
46I H2  H2  H 0 1 N N N N N N 10.233 28.687 85.816 -0.679 1.882  -1.712 H2  46I 30 
46I H3  H3  H 0 1 N N N N N N 12.909 30.126 85.544 -1.539 1.061  1.102  H3  46I 31 
46I H4  H4  H 0 1 N N N N N N 12.043 27.226 85.908 -0.854 -0.632 -1.347 H4  46I 32 
46I H5  H5  H 0 1 N N N N N N 13.497 28.817 83.747 0.607  -0.287 1.312  H5  46I 33 
46I H6  H6  H 0 1 N N N N N N 12.813 25.840 83.823 0.695  -2.580 0.287  H6  46I 34 
46I H7  H7  H 0 1 N N N N N N 14.465 26.540 83.914 1.356  -1.853 -1.197 H7  46I 35 
46I H8  H8  H 0 1 N N N N N N 10.672 31.071 86.547 -0.760 4.035  -0.678 H8  46I 36 
46I H9  H9  H 0 1 N N N N N N 7.647  28.904 80.965 4.324  5.071  -0.768 H9  46I 37 
46I H10 H10 H 0 1 N N N N N N 10.296 31.450 81.305 1.700  5.204  0.983  H10 46I 38 
46I H11 H11 H 0 1 N N N N N N 14.684 25.086 87.386 -3.544 -4.367 0.256  H11 46I 39 
46I H12 H12 H 0 1 N N N N N N 15.936 28.404 88.559 -0.496 -3.996 -0.480 H12 46I 40 
46I H13 H13 H 0 1 N N N N N N 11.432 30.409 90.255 -4.394 -0.947 0.999  H13 46I 41 
46I H14 H14 H 0 1 N N N N N N 13.853 31.968 87.905 -6.264 1.366  -0.058 H14 46I 42 
46I H15 H15 H 0 1 N N N N N N 16.173 25.701 81.106 4.443  -2.417 -1.632 H15 46I 43 
46I H16 H16 H 0 1 N N N N N N 15.188 29.238 81.192 5.573  -3.481 1.117  H16 46I 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
46I O18 P6  DOUB N N 1  
46I O04 P1  DOUB N N 2  
46I P6  O16 SING N N 3  
46I P6  O17 SING N N 4  
46I P6  O6  SING N N 5  
46I O03 P1  SING N N 6  
46I P1  O02 SING N N 7  
46I P1  O01 SING N N 8  
46I O6  C6  SING N N 9  
46I O01 C1  SING N N 10 
46I O5  C1  SING N N 11 
46I O5  C5  SING N N 12 
46I C6  C5  SING N N 13 
46I C1  C2  SING N N 14 
46I C5  C4  SING N N 15 
46I C2  O2  SING N N 16 
46I C2  C3  SING N N 17 
46I C4  C3  SING N N 18 
46I C4  O09 SING N N 19 
46I C3  O08 SING N N 20 
46I O09 P4  SING N N 21 
46I O10 P4  DOUB N N 22 
46I P4  O11 SING N N 23 
46I P4  O12 SING N N 24 
46I O08 P3  SING N N 25 
46I O06 P3  DOUB N N 26 
46I O07 P3  SING N N 27 
46I P3  O05 SING N N 28 
46I C1  H1  SING N N 29 
46I C2  H2  SING N N 30 
46I C3  H3  SING N N 31 
46I C4  H4  SING N N 32 
46I C5  H5  SING N N 33 
46I C6  H6  SING N N 34 
46I C6  H7  SING N N 35 
46I O2  H8  SING N N 36 
46I O03 H9  SING N N 37 
46I O02 H10 SING N N 38 
46I O11 H11 SING N N 39 
46I O12 H12 SING N N 40 
46I O05 H13 SING N N 41 
46I O07 H14 SING N N 42 
46I O16 H15 SING N N 43 
46I O17 H16 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
46I InChI            InChI                1.06  "InChI=1S/C6H16O18P4/c7-3-5(23-27(14,15)16)4(22-26(11,12)13)2(1-20-25(8,9)10)21-6(3)24-28(17,18)19/h2-7H,1H2,(H2,8,9,10)(H2,11,12,13)(H2,14,15,16)(H2,17,18,19)/t2-,3-,4-,5-,6+/m1/s1" 
46I InChIKey         InChI                1.06  HWPKOYDCMYQLFR-UKFBFLRUSA-N                                                                                                                                                            
46I SMILES_CANONICAL CACTVS               3.385 "O[C@H]1[C@@H](O[C@H](CO[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O)O[P](O)(O)=O"                                                                                              
46I SMILES           CACTVS               3.385 "O[CH]1[CH](O[CH](CO[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O)O[P](O)(O)=O"                                                                                                      
46I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O"                                                                                                  
46I SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O"                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           46I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{S},3~{R},4~{R},5~{R},6~{R})-3-oxidanyl-2,5-diphosphonooxy-6-(phosphonooxymethyl)oxan-4-yl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
46I "Create component" 2023-07-12 PDBE 
46I "Initial release"  2024-02-28 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      46I 
_pdbx_chem_comp_synonyms.name         "[(2S,3R,4R,5R,6R)-3-oxidanyl-2,5-diphosphonooxy-6-(phosphonooxymethyl)oxan-4-yl] dihydrogen phosphate" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
