data_40I
# 
_chem_comp.id                                    40I 
_chem_comp.name                                  "N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S}-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]furan-2-carboxamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H36 N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-02-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        476.566 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     40I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7WO2 
_chem_comp.pdbx_subcomponent_list                "FOA VAL LEU ELF" 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
40I C26 C9  C 0 1 N N N N N N 20.321 16.902 31.038 5.307  -0.302 -0.529 C1   FOA 1  
40I C27 C22 C 0 1 Y N N N N N 19.507 17.782 31.991 6.460  -0.261 0.376  C2   FOA 2  
40I C28 C10 C 0 1 Y N N N N N 20.032 18.596 33.007 7.765  -0.097 0.007  C3   FOA 3  
40I C29 C23 C 0 1 Y N N N N N 18.952 19.199 33.651 8.524  -0.118 1.187  C4   FOA 4  
40I C30 C24 C 0 1 Y N N N N N 17.796 18.733 33.026 7.661  -0.291 2.212  C5   FOA 5  
40I O32 O4  O 0 1 N N N N N N 21.469 17.095 30.805 5.471  -0.190 -1.730 O6   FOA 6  
40I O31 O3  O 0 1 Y N N N N N 18.159 17.877 32.037 6.418  -0.372 1.720  O8   FOA 7  
40I N25 N4  N 0 1 N N N N N N 19.654 15.750 30.435 4.066  -0.470 -0.032 N    VAL 8  
40I C21 C6  C 0 1 N N S N N N 20.410 14.879 29.576 2.914  -0.511 -0.936 CA   VAL 9  
40I C20 C5  C 0 1 N N N N N N 19.648 14.763 28.252 1.673  -0.094 -0.189 C    VAL 10 
40I O33 O5  O 0 1 N N N N N N 18.538 14.349 28.235 1.660  -0.115 1.024  O    VAL 11 
40I C22 C7  C 0 1 N N N N N N 20.413 13.520 30.239 2.734  -1.934 -1.468 CB   VAL 12 
40I C24 C8  C 0 1 N N N N N N 21.180 12.508 29.399 3.929  -2.304 -2.349 CG1  VAL 13 
40I C23 C21 C 0 1 N N N N N N 20.917 13.643 31.676 2.644  -2.910 -0.294 CG2  VAL 14 
40I N19 N3  N 0 1 N N N N N N 20.316 15.189 27.018 0.579  0.303  -0.868 N    LEU 15 
40I C14 C18 C 0 1 N N S N N N 19.583 15.099 25.752 -0.586 0.817  -0.144 CA   LEU 16 
40I C13 C2  C 0 1 N N N N N N 19.570 13.654 25.290 -1.825 0.614  -0.977 C    LEU 17 
40I O34 O6  O 0 1 N N N N N N 20.562 13.007 25.281 -1.743 0.091  -2.068 O    LEU 18 
40I C15 C3  C 0 1 N N N N N N 20.324 15.922 24.690 -0.396 2.310  0.133  CB   LEU 19 
40I C16 C19 C 0 1 N N N N N N 20.044 17.459 24.688 0.789  2.507  1.081  CG   LEU 20 
40I C17 C4  C 0 1 N N N N N N 21.087 18.201 23.803 1.056  4.003  1.259  CD1  LEU 21 
40I C18 C20 C 0 1 N N N N N N 20.007 18.093 26.088 0.464  1.881  2.439  CD2  LEU 22 
40I C07 C16 C 0 1 N N N N N N 19.104 9.101  27.414 -5.473 -3.014 0.503  C6   ELF 23 
40I C03 C12 C 0 1 N N S N N N 18.261 11.690 24.384 -4.229 0.816  -1.319 C11  ELF 24 
40I C06 C15 C 0 1 N N N N N N 18.962 10.497 27.056 -5.328 -1.785 -0.402 C13  ELF 25 
40I C10 C1  C 0 1 N N N N N N 16.469 10.143 27.580 -6.464 -0.582 1.449  C15  ELF 26 
40I C04 C13 C 0 1 N N N N N N 17.291 10.871 25.264 -5.449 0.710  -0.401 C17  ELF 27 
40I C02 C11 C 0 1 N N N N N N 17.712 11.703 22.948 -4.404 1.986  -2.253 C24  ELF 28 
40I C05 C14 C 0 1 N N S N N N 17.615 10.927 26.826 -5.318 -0.534 0.480  C25  ELF 29 
40I C08 C17 C 0 1 N N N N N N 18.339 8.710  28.617 -6.865 -2.995 1.135  C27  ELF 30 
40I N12 N1  N 0 1 N N N N N N 18.306 13.067 24.849 -3.025 1.014  -0.509 N3   ELF 31 
40I N09 N2  N 0 1 N N N N N N 16.849 8.989  28.502 -7.131 -1.698 1.744  N4   ELF 32 
40I O01 O1  O 0 1 N N N N N N 17.738 10.671 22.346 -3.604 2.891  -2.243 O3   ELF 33 
40I O11 O2  O 0 1 N N N N N N 15.339 10.462 27.440 -6.801 0.449  1.991  O4   ELF 34 
40I H12 H12 H 0 1 N N N N N N 21.077 18.730 33.245 8.139  0.024  -0.999 H3   FOA 35 
40I H32 H32 H 0 1 N N N N N N 19.002 19.894 34.476 9.596  -0.015 1.262  H4   FOA 36 
40I H33 H33 H 0 1 N N N N N N 16.784 19.007 33.285 7.928  -0.352 3.257  H5   FOA 37 
40I H36 H36 H 0 1 N N N N N N 18.687 15.570 30.617 3.935  -0.563 0.925  H    VAL 38 
40I H7  H7  H 0 1 N N N N N N 21.435 15.242 29.409 3.082  0.170  -1.770 HA   VAL 39 
40I H8  H8  H 0 1 N N N N N N 19.369 13.177 30.289 1.818  -1.989 -2.057 HB   VAL 40 
40I H9  H9  H 0 1 N N N N N N 21.168 11.529 29.901 4.828  -2.365 -1.735 HG11 VAL 41 
40I H10 H10 H 0 1 N N N N N N 20.706 12.418 28.410 3.747  -3.269 -2.822 HG12 VAL 42 
40I H11 H11 H 0 1 N N N N N N 22.220 12.845 29.278 4.064  -1.543 -3.116 HG13 VAL 43 
40I H29 H29 H 0 1 N N N N N N 20.314 14.390 32.214 1.793  -2.647 0.334  HG21 VAL 44 
40I H30 H30 H 0 1 N N N N N N 20.829 12.669 32.180 2.516  -3.924 -0.673 HG22 VAL 45 
40I H31 H31 H 0 1 N N N N N N 21.971 13.958 31.669 3.560  -2.856 0.295  HG23 VAL 46 
40I H35 H35 H 0 1 N N N N N N 21.254 15.534 27.040 0.563  0.248  -1.836 H2   LEU 47 
40I H24 H24 H 0 1 N N N N N N 18.554 15.471 25.866 -0.692 0.283  0.801  HA   LEU 48 
40I H2  H2  H 0 1 N N N N N N 20.041 15.528 23.703 -0.203 2.832  -0.804 HB2  LEU 49 
40I H3  H3  H 0 1 N N N N N N 21.403 15.778 24.847 -1.300 2.712  0.592  HB3  LEU 50 
40I H25 H25 H 0 1 N N N N N N 19.056 17.611 24.228 1.673  2.027  0.661  HG   LEU 51 
40I H4  H4  H 0 1 N N N N N N 20.875 19.280 23.813 0.172  4.483  1.678  HD11 LEU 52 
40I H5  H5  H 0 1 N N N N N N 22.097 18.022 24.199 1.901  4.143  1.934  HD12 LEU 53 
40I H6  H6  H 0 1 N N N N N N 21.026 17.825 22.771 1.287  4.448  0.291  HD13 LEU 54 
40I H26 H26 H 0 1 N N N N N N 19.269 17.566 26.710 1.309  2.022  3.114  HD21 LEU 55 
40I H27 H27 H 0 1 N N N N N N 21.001 18.014 26.552 -0.420 2.361  2.858  HD22 LEU 56 
40I H28 H28 H 0 1 N N N N N N 19.725 19.153 26.003 0.274  0.816  2.312  HD23 LEU 57 
40I H20 H20 H 0 1 N N N N N N 18.756 8.490  26.568 -5.353 -3.921 -0.090 H1   ELF 58 
40I H21 H21 H 0 1 N N N N N N 20.169 8.898  27.600 -4.715 -2.986 1.286  H2   ELF 59 
40I H14 H14 H 0 1 N N N N N N 19.261 11.231 24.401 -4.130 -0.101 -1.899 H3   ELF 60 
40I H18 H18 H 0 1 N N N N N N 19.539 10.674 26.136 -4.393 -1.848 -0.960 H4   ELF 61 
40I H19 H19 H 0 1 N N N N N N 19.379 11.103 27.873 -6.167 -1.739 -1.096 H5   ELF 62 
40I H15 H15 H 0 1 N N N N N N 16.274 11.260 25.109 -5.508 1.597  0.229  H6   ELF 63 
40I H16 H16 H 0 1 N N N N N N 17.336 9.821  24.940 -6.353 0.633  -1.006 H7   ELF 64 
40I H13 H13 H 0 1 N N N N N N 17.320 12.605 22.503 -5.244 2.014  -2.931 H8   ELF 65 
40I H17 H17 H 0 1 N N N N N N 17.528 11.982 27.127 -4.379 -0.488 1.033  H9   ELF 66 
40I H22 H22 H 0 1 N N N N N N 18.480 7.632  28.785 -7.613 -3.193 0.367  H10  ELF 67 
40I H23 H23 H 0 1 N N N N N N 18.733 9.270  29.478 -6.924 -3.769 1.901  H11  ELF 68 
40I H1  H1  H 0 1 N N N N N N 17.469 13.614 24.867 -3.090 1.432  0.364  H12  ELF 69 
40I H34 H34 H 0 1 N N N N N N 16.165 8.453  28.997 -7.838 -1.644 2.407  H15  ELF 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
40I O01 C02 DOUB N N 1  
40I C02 C03 SING N N 2  
40I C17 C16 SING N N 3  
40I C03 N12 SING N N 4  
40I C03 C04 SING N N 5  
40I C16 C15 SING N N 6  
40I C16 C18 SING N N 7  
40I C15 C14 SING N N 8  
40I N12 C13 SING N N 9  
40I C04 C05 SING N N 10 
40I O34 C13 DOUB N N 11 
40I C13 C14 SING N N 12 
40I C14 N19 SING N N 13 
40I C05 C06 SING N N 14 
40I C05 C10 SING N N 15 
40I N19 C20 SING N N 16 
40I C06 C07 SING N N 17 
40I C07 C08 SING N N 18 
40I O11 C10 DOUB N N 19 
40I C10 N09 SING N N 20 
40I O33 C20 DOUB N N 21 
40I C20 C21 SING N N 22 
40I N09 C08 SING N N 23 
40I C24 C22 SING N N 24 
40I C21 C22 SING N N 25 
40I C21 N25 SING N N 26 
40I C22 C23 SING N N 27 
40I N25 C26 SING N N 28 
40I O32 C26 DOUB N N 29 
40I C26 C27 SING N N 30 
40I C27 O31 SING Y N 31 
40I C27 C28 DOUB Y N 32 
40I O31 C30 SING Y N 33 
40I C28 C29 SING Y N 34 
40I C30 C29 DOUB Y N 35 
40I N12 H1  SING N N 36 
40I C15 H2  SING N N 37 
40I C15 H3  SING N N 38 
40I C17 H4  SING N N 39 
40I C17 H5  SING N N 40 
40I C17 H6  SING N N 41 
40I C21 H7  SING N N 42 
40I C22 H8  SING N N 43 
40I C24 H9  SING N N 44 
40I C24 H10 SING N N 45 
40I C24 H11 SING N N 46 
40I C28 H12 SING N N 47 
40I C02 H13 SING N N 48 
40I C03 H14 SING N N 49 
40I C04 H15 SING N N 50 
40I C04 H16 SING N N 51 
40I C05 H17 SING N N 52 
40I C06 H18 SING N N 53 
40I C06 H19 SING N N 54 
40I C07 H20 SING N N 55 
40I C07 H21 SING N N 56 
40I C08 H22 SING N N 57 
40I C08 H23 SING N N 58 
40I C14 H24 SING N N 59 
40I C16 H25 SING N N 60 
40I C18 H26 SING N N 61 
40I C18 H27 SING N N 62 
40I C18 H28 SING N N 63 
40I C23 H29 SING N N 64 
40I C23 H30 SING N N 65 
40I C23 H31 SING N N 66 
40I C29 H32 SING N N 67 
40I C30 H33 SING N N 68 
40I N09 H34 SING N N 69 
40I N19 H35 SING N N 70 
40I N25 H36 SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
40I InChI            InChI                1.03  "InChI=1S/C24H36N4O6/c1-14(2)11-18(22(31)26-17(13-29)12-16-7-5-9-25-21(16)30)27-24(33)20(15(3)4)28-23(32)19-8-6-10-34-19/h6,8,10,13-18,20H,5,7,9,11-12H2,1-4H3,(H,25,30)(H,26,31)(H,27,33)(H,28,32)/t16-,17-,18-,20-/m0/s1" 
40I InChIKey         InChI                1.03  BLZXYDNCPITFHC-JPLJXNOCSA-N                                                                                                                                                                                                 
40I SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)[C@@H](NC(=O)c1occc1)C(C)C)C(=O)N[C@@H](C[C@@H]2CCCNC2=O)C=O"                                                                                                                                            
40I SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)[CH](NC(=O)c1occc1)C(C)C)C(=O)N[CH](C[CH]2CCCNC2=O)C=O"                                                                                                                                                   
40I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCCNC1=O)C=O)NC(=O)[C@H](C(C)C)NC(=O)c2ccco2"                                                                                                                                            
40I SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCCNC1=O)C=O)NC(=O)C(C(C)C)NC(=O)c2ccco2"                                                                                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           40I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]furan-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
40I "Create component"         2022-02-01 PDBJ 
40I "Modify component comp_id" 2022-02-02 PDBJ 
40I "Initial release"          2022-12-28 RCSB 
40I "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            40I 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C02 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
