data_0MI
#

_chem_comp.id                                   0MI
_chem_comp.name                                 "1-[(2~{R},4~{S},5~{R})-5-[[(azanylidene-$l^{4}-azanylidene)amino]methyl]-4-oxidanyl-oxolan-2-yl]-5-methyl-pyrimidine-2,4-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H14 N5 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-06-14
_chem_comp.pdbx_modified_date                   2021-09-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       268.249
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    0MI
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       7N7U
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0MI  N1   N1   N   0  1  N  N  N   8.263  -76.644  14.594  ?  ?  ?  N1   0MI   1  
0MI  C7   C1   C   0  1  N  N  N   7.829  -76.680  16.009  ?  ?  ?  C7   0MI   2  
0MI  C8   C2   C   0  1  N  N  N   6.679  -78.141  20.575  ?  ?  ?  C8   0MI   3  
0MI  N2   N2   N   1  1  N  N  N   7.774  -75.854  13.713  ?  ?  ?  N2   0MI   4  
0MI  C9   C3   C   0  1  N  N  N   4.507  -76.999  20.544  ?  ?  ?  C9   0MI   5  
0MI  O1   O1   O   0  1  N  N  N   8.761  -76.397  18.203  ?  ?  ?  O1   0MI   6  
0MI  C1   C4   C   0  1  N  N  N   5.024  -76.108  19.535  ?  ?  ?  C1   0MI   7  
0MI  C5   C5   C   0  1  N  N  S   8.953  -78.599  17.311  ?  ?  ?  C5   0MI   8  
0MI  C6   C6   C   0  1  N  N  R   8.925  -77.109  16.963  ?  ?  ?  C6   0MI   9  
0MI  N3   N3   N  -1  1  N  N  N   7.243  -75.072  13.036  ?  ?  ?  N3   0MI  10  
0MI  C4   C7   C   0  1  N  N  N   9.065  -78.635  18.824  ?  ?  ?  C4   0MI  11  
0MI  C3   C8   C   0  1  N  N  R   8.537  -77.291  19.269  ?  ?  ?  C3   0MI  12  
0MI  O3   O2   O   0  1  N  N  N   3.389  -76.941  21.009  ?  ?  ?  O3   0MI  13  
0MI  C2   C9   C   0  1  N  N  N   6.281  -76.297  19.111  ?  ?  ?  C2   0MI  14  
0MI  N4   N4   N   0  1  N  N  N   5.385  -77.961  20.980  ?  ?  ?  N4   0MI  15  
0MI  N    N5   N   0  1  N  N  N   7.109  -77.262  19.612  ?  ?  ?  N    0MI  16  
0MI  C    C10  C   0  1  N  N  N   4.154  -75.010  19.036  ?  ?  ?  C    0MI  17  
0MI  O    O3   O   0  1  N  N  N  10.140  -79.211  16.818  ?  ?  ?  O    0MI  18  
0MI  O2   O4   O   0  1  N  N  N   7.404  -78.966  21.078  ?  ?  ?  O2   0MI  19  
0MI  H1   H1   H   0  1  N  N  N   7.491  -75.673  16.296  ?  ?  ?  H1   0MI  20  
0MI  H2   H2   H   0  1  N  N  N   6.991  -77.387  16.099  ?  ?  ?  H2   0MI  21  
0MI  H3   H3   H   0  1  N  N  N   8.039  -79.104  16.966  ?  ?  ?  H3   0MI  22  
0MI  H4   H4   H   0  1  N  N  N   9.895  -76.844  16.517  ?  ?  ?  H4   0MI  23  
0MI  H5   H5   H   0  1  N  N  N   6.609  -74.498  13.554  ?  ?  ?  H5   0MI  24  
0MI  H6   H6   H   0  1  N  N  N   8.456  -79.451  19.241  ?  ?  ?  H6   0MI  25  
0MI  H7   H7   H   0  1  N  N  N  10.112  -78.764  19.134  ?  ?  ?  H7   0MI  26  
0MI  H8   H8   H   0  1  N  N  N   9.117  -76.969  20.147  ?  ?  ?  H8   0MI  27  
0MI  H9   H9   H   0  1  N  N  N   6.660  -75.652  18.332  ?  ?  ?  H9   0MI  28  
0MI  H10  H10  H   0  1  N  N  N   5.041  -78.599  21.669  ?  ?  ?  H10  0MI  29  
0MI  H11  H11  H   0  1  N  N  N   3.174  -75.064  19.532  ?  ?  ?  H11  0MI  30  
0MI  H12  H12  H   0  1  N  N  N   4.624  -74.040  19.258  ?  ?  ?  H12  0MI  31  
0MI  H13  H13  H   0  1  N  N  N   4.021  -75.113  17.949  ?  ?  ?  H13  0MI  32  
0MI  H14  H14  H   0  1  N  N  N  10.138  -80.134  17.044  ?  ?  ?  H14  0MI  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0MI  N3  N2   DOUB  N  N   1  
0MI  N2  N1   DOUB  N  N   2  
0MI  N1  C7   SING  N  N   3  
0MI  C7  C6   SING  N  N   4  
0MI  O   C5   SING  N  N   5  
0MI  C6  C5   SING  N  N   6  
0MI  C6  O1   SING  N  N   7  
0MI  C5  C4   SING  N  N   8  
0MI  O1  C3   SING  N  N   9  
0MI  C4  C3   SING  N  N  10  
0MI  C   C1   SING  N  N  11  
0MI  C2  C1   DOUB  N  N  12  
0MI  C2  N    SING  N  N  13  
0MI  C3  N    SING  N  N  14  
0MI  C1  C9   SING  N  N  15  
0MI  N   C8   SING  N  N  16  
0MI  C9  N4   SING  N  N  17  
0MI  C9  O3   DOUB  N  N  18  
0MI  C8  N4   SING  N  N  19  
0MI  C8  O2   DOUB  N  N  20  
0MI  C7  H1   SING  N  N  21  
0MI  C7  H2   SING  N  N  22  
0MI  C5  H3   SING  N  N  23  
0MI  C6  H4   SING  N  N  24  
0MI  N3  H5   SING  N  N  25  
0MI  C4  H6   SING  N  N  26  
0MI  C4  H7   SING  N  N  27  
0MI  C3  H8   SING  N  N  28  
0MI  C2  H9   SING  N  N  29  
0MI  N4  H10  SING  N  N  30  
0MI  C   H11  SING  N  N  31  
0MI  C   H12  SING  N  N  32  
0MI  C   H13  SING  N  N  33  
0MI  O   H14  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0MI  InChI             InChI                 1.03   "InChI=1S/C10H14N5O4/c1-5-4-15(10(18)13-9(5)17)8-2-6(16)7(19-8)3-12-14-11/h4,6-8,11,16H,2-3H2,1H3,(H,13,17,18)/t6-,7+,8+/m0/s1"  
0MI  InChIKey          InChI                 1.03   WPGIPVMLNBRRLK-XLPZGREQSA-N  
0MI  SMILES_CANONICAL  CACTVS                3.385  "CC1=CN([C@H]2C[C@H](O)[C@@H](CN=[N]=N)O2)C(=O)NC1=O"  
0MI  SMILES            CACTVS                3.385  "CC1=CN([CH]2C[CH](O)[CH](CN=[N]=N)O2)C(=O)NC1=O"  
0MI  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CN=[N]=N)O"  
0MI  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1=CN(C(=O)NC1=O)C2CC(C(O2)CN=[N]=N)O"  
#
_pdbx_chem_comp_identifier.comp_id          0MI
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "1-[(2~{R},4~{S},5~{R})-5-[[(azanylidene-$l^{4}-azanylidene)amino]methyl]-4-oxidanyl-oxolan-2-yl]-5-methyl-pyrimidine-2,4-dione"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0MI  "Create component"  2021-06-14  RCSB  
0MI  "Initial release"   2021-09-08  RCSB  
##
