data_Y5H
# 
_chem_comp.id                                    Y5H 
_chem_comp.name                                  "3-[(3AS,4R,5S,8AS,8BR)-4-[2-(5-CHLOROTHIOPHEN-2-YL)-1,3-OXAZOL-4-YL]-1,3-DIOXO-4,6,7,8,8A,8B-HEXAHYDRO-3AH-PYRROLO[3,4-A]PYRROLIZIN-2-YL]PROPYL-TRIMETHYL-AZANIUM" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H28 Cl N4 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2011-01-13 
_chem_comp.pdbx_modified_date                    2011-12-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        464.001 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y5H 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2Y5H 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y5H CL1  CL1  CL 0 0 N N N -0.603 6.004  27.714 -5.744 1.880  -1.360 CL1  Y5H 1  
Y5H C25  C25  C  0 1 Y N N -1.413 7.520  27.383 -4.290 2.283  -0.502 C25  Y5H 2  
Y5H C24  C24  C  0 1 Y N N -2.444 8.089  28.085 -4.215 3.146  0.519  C24  Y5H 3  
Y5H C22  C22  C  0 1 Y N N -2.859 9.298  27.480 -2.956 3.313  1.053  C22  Y5H 4  
Y5H S1   S1   S  0 1 Y N N -0.857 8.483  26.044 -2.700 1.613  -0.839 S1   Y5H 5  
Y5H C20  C20  C  0 1 Y N N -2.092 9.655  26.377 -1.986 2.569  0.453  C20  Y5H 6  
Y5H C17  C17  C  0 1 Y N N -2.326 10.758 25.457 -0.566 2.562  0.830  C17  Y5H 7  
Y5H N16  N16  N  0 1 Y N N -1.737 10.983 24.300 0.361  1.780  0.320  N16  Y5H 8  
Y5H O10  O10  O  0 1 Y N N -3.417 11.532 25.686 0.007  3.358  1.751  O10  Y5H 9  
Y5H C9   C9   C  0 1 Y N N -3.424 12.380 24.590 1.319  3.045  1.804  C9   Y5H 10 
Y5H C4   C4   C  0 1 Y N N -2.421 12.054 23.771 1.533  2.062  0.911  C4   Y5H 11 
Y5H C1   C1   C  0 1 N N R -2.078 12.696 22.451 2.853  1.395  0.626  C1   Y5H 12 
Y5H N3   N3   N  0 1 N N N -3.075 13.706 22.008 3.149  1.442  -0.826 N3   Y5H 13 
Y5H C7   C7   C  0 1 N N S -2.785 13.859 20.572 4.102  0.315  -1.051 C7   Y5H 14 
Y5H C14  C14  C  0 1 N N N -1.569 14.800 20.506 5.460  0.837  -0.544 C14  Y5H 15 
Y5H C15  C15  C  0 1 N N N -1.736 15.683 21.754 5.349  2.374  -0.583 C15  Y5H 16 
Y5H C8   C8   C  0 1 N N N -2.855 15.049 22.602 3.936  2.661  -1.131 C8   Y5H 17 
Y5H C5   C5   C  0 1 N N R -2.524 12.458 20.029 3.616  -0.813 -0.122 C5   Y5H 18 
Y5H C2   C2   C  0 1 N N S -2.130 11.645 21.291 2.783  -0.103 0.977  C2   Y5H 19 
Y5H C6   C6   C  0 1 N N N -3.234 10.600 21.373 1.379  -0.610 0.736  C6   Y5H 20 
Y5H O13  O13  O  0 1 N N N -3.355 9.693  22.179 0.400  -0.295 1.376  O13  Y5H 21 
Y5H C11  C11  C  0 1 N N N -3.795 11.835 19.511 2.590  -1.652 -0.850 C11  Y5H 22 
Y5H O18  O18  O  0 1 N N N -4.458 12.126 18.515 2.822  -2.382 -1.790 O18  Y5H 23 
Y5H N12  N12  N  0 1 N N N -4.198 10.794 20.370 1.387  -1.462 -0.296 N12  Y5H 24 
Y5H C19  C19  C  0 1 N N N -5.387 9.943  20.203 0.178  -2.133 -0.779 C19  Y5H 25 
Y5H C21  C21  C  0 1 N N N -5.123 8.851  19.157 -0.062 -3.404 0.038  C21  Y5H 26 
Y5H C23  C23  C  0 1 N N N -6.375 7.954  19.209 -1.388 -4.040 -0.383 C23  Y5H 27 
Y5H N29  N29  N  1 1 N N N -6.366 6.830  18.192 -1.674 -5.193 0.480  N29  Y5H 28 
Y5H C32  C32  C  0 1 N N N -6.317 7.398  16.802 -2.881 -5.878 -0.002 C32  Y5H 29 
Y5H C31  C31  C  0 1 N N N -7.696 6.127  18.335 -0.538 -6.123 0.447  C31  Y5H 30 
Y5H C30  C30  C  0 1 N N N -5.235 5.877  18.381 -1.891 -4.733 1.858  C30  Y5H 31 
Y5H H24  H24  H  0 1 N N N -2.881 7.670  28.980 -5.079 3.673  0.897  H24  Y5H 32 
Y5H H22  H22  H  0 1 N N N -3.690 9.886  27.840 -2.755 3.979  1.879  H22  Y5H 33 
Y5H H9   H9   H  0 1 N N N -4.131 13.180 24.424 2.060  3.501  2.443  H9   Y5H 34 
Y5H H1   H1   H  0 1 N N N -1.087 13.140 22.624 3.651  1.879  1.190  H1   Y5H 35 
Y5H H7   H7   H  0 1 N N N -3.592 14.293 19.964 4.144  0.014  -2.098 H7   Y5H 36 
Y5H H82  H82  H  0 1 N N N -3.773 15.654 22.558 3.973  2.828  -2.207 H82  Y5H 37 
Y5H H81  H81  H  0 1 N N N -2.580 14.988 23.665 3.503  3.526  -0.628 H81  Y5H 38 
Y5H H5   H5   H  0 1 N N N -1.779 12.476 19.220 4.437  -1.408 0.278  H5   Y5H 39 
Y5H H2   H2   H  0 1 N N N -1.161 11.124 21.310 3.146  -0.314 1.983  H2   Y5H 40 
Y5H H141 H141 H  0 0 N N N -0.622 14.240 20.530 5.638  0.497  0.476  H141 Y5H 41 
Y5H H142 H142 H  0 0 N N N -1.528 15.381 19.573 6.263  0.500  -1.200 H142 Y5H 42 
Y5H H151 H151 H  0 0 N N N -2.010 16.708 21.464 5.457  2.787  0.420  H151 Y5H 43 
Y5H H152 H152 H  0 0 N N N -0.796 15.741 22.323 6.106  2.791  -1.247 H152 Y5H 44 
Y5H H191 H191 H  0 0 N N N -5.630 9.469  21.166 -0.677 -1.465 -0.671 H191 Y5H 45 
Y5H H192 H192 H  0 0 N N N -6.227 10.567 19.863 0.303  -2.395 -1.830 H192 Y5H 46 
Y5H H211 H211 H  0 0 N N N -4.987 9.285  18.156 0.751  -4.109 -0.139 H211 Y5H 47 
Y5H H212 H212 H  0 0 N N N -4.201 8.290  19.366 -0.100 -3.152 1.098  H212 Y5H 48 
Y5H H231 H231 H  0 0 N N N -6.431 7.506  20.212 -2.189 -3.306 -0.287 H231 Y5H 49 
Y5H H232 H232 H  0 0 N N N -7.239 8.593  18.976 -1.320 -4.369 -1.420 H232 Y5H 50 
Y5H H321 H321 H  0 0 N N N -6.305 8.497  16.855 -2.721 -6.220 -1.025 H321 Y5H 51 
Y5H H322 H322 H  0 0 N N N -5.407 7.045  16.294 -3.093 -6.734 0.638  H322 Y5H 52 
Y5H H323 H323 H  0 0 N N N -7.203 7.068  16.240 -3.725 -5.188 0.022  H323 Y5H 53 
Y5H H311 H311 H  0 0 N N N -7.908 5.956  19.401 0.330  -5.652 0.909  H311 Y5H 54 
Y5H H312 H312 H  0 0 N N N -8.489 6.752  17.899 -0.794 -7.030 0.996  H312 Y5H 55 
Y5H H313 H313 H  0 0 N N N -7.658 5.161  17.810 -0.306 -6.378 -0.587 H313 Y5H 56 
Y5H H301 H301 H  0 0 N N N -4.786 5.642  17.405 -2.734 -4.043 1.882  H301 Y5H 57 
Y5H H302 H302 H  0 0 N N N -4.476 6.334  19.034 -2.103 -5.589 2.498  H302 Y5H 58 
Y5H H303 H303 H  0 0 N N N -5.609 4.952  18.844 -0.995 -4.224 2.216  H303 Y5H 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y5H C1  C2   SING N N 1  
Y5H C1  N3   SING N N 2  
Y5H C1  C4   SING N N 3  
Y5H S1  C20  SING Y N 4  
Y5H S1  C25  SING Y N 5  
Y5H CL1 C25  SING N N 6  
Y5H C2  C5   SING N N 7  
Y5H C2  C6   SING N N 8  
Y5H N3  C7   SING N N 9  
Y5H N3  C8   SING N N 10 
Y5H C4  C9   DOUB Y N 11 
Y5H C4  N16  SING Y N 12 
Y5H C5  C7   SING N N 13 
Y5H C5  C11  SING N N 14 
Y5H C6  N12  SING N N 15 
Y5H C6  O13  DOUB N N 16 
Y5H C7  C14  SING N N 17 
Y5H C8  C15  SING N N 18 
Y5H C9  O10  SING Y N 19 
Y5H O10 C17  SING Y N 20 
Y5H C11 N12  SING N N 21 
Y5H C11 O18  DOUB N N 22 
Y5H N12 C19  SING N N 23 
Y5H C14 C15  SING N N 24 
Y5H N16 C17  DOUB Y N 25 
Y5H C17 C20  SING Y N 26 
Y5H C19 C21  SING N N 27 
Y5H C20 C22  DOUB Y N 28 
Y5H C21 C23  SING N N 29 
Y5H C22 C24  SING Y N 30 
Y5H C23 N29  SING N N 31 
Y5H C24 C25  DOUB Y N 32 
Y5H N29 C30  SING N N 33 
Y5H N29 C31  SING N N 34 
Y5H N29 C32  SING N N 35 
Y5H C24 H24  SING N N 36 
Y5H C22 H22  SING N N 37 
Y5H C9  H9   SING N N 38 
Y5H C1  H1   SING N N 39 
Y5H C7  H7   SING N N 40 
Y5H C8  H82  SING N N 41 
Y5H C8  H81  SING N N 42 
Y5H C5  H5   SING N N 43 
Y5H C2  H2   SING N N 44 
Y5H C14 H141 SING N N 45 
Y5H C14 H142 SING N N 46 
Y5H C15 H151 SING N N 47 
Y5H C15 H152 SING N N 48 
Y5H C19 H191 SING N N 49 
Y5H C19 H192 SING N N 50 
Y5H C21 H211 SING N N 51 
Y5H C21 H212 SING N N 52 
Y5H C23 H231 SING N N 53 
Y5H C23 H232 SING N N 54 
Y5H C32 H321 SING N N 55 
Y5H C32 H322 SING N N 56 
Y5H C32 H323 SING N N 57 
Y5H C31 H311 SING N N 58 
Y5H C31 H312 SING N N 59 
Y5H C31 H313 SING N N 60 
Y5H C30 H301 SING N N 61 
Y5H C30 H302 SING N N 62 
Y5H C30 H303 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y5H SMILES_CANONICAL CACTVS               3.352 "C[N+](C)(C)CCCN1C(=O)[C@H]2[C@@H]3CCCN3[C@H]([C@H]2C1=O)c4coc(n4)c5sc(Cl)cc5"                                                                                                             
Y5H SMILES           CACTVS               3.352 "C[N+](C)(C)CCCN1C(=O)[CH]2[CH]3CCCN3[CH]([CH]2C1=O)c4coc(n4)c5sc(Cl)cc5"                                                                                                                  
Y5H SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C[N+](C)(C)CCCN1C(=O)[C@H]2[C@@H]3CCC[N@@]3[C@H]([C@H]2C1=O)c4coc(n4)c5ccc(s5)Cl"                                                                                                         
Y5H SMILES           "OpenEye OEToolkits" 1.6.1 "C[N+](C)(C)CCCN1C(=O)C2C3CCCN3C(C2C1=O)c4coc(n4)c5ccc(s5)Cl"                                                                                                                              
Y5H InChI            InChI                1.03  "InChI=1S/C22H28ClN4O3S/c1-27(2,3)11-5-10-26-21(28)17-14-6-4-9-25(14)19(18(17)22(26)29)13-12-30-20(24-13)15-7-8-16(23)31-15/h7-8,12,14,17-19H,4-6,9-11H2,1-3H3/q+1/t14-,17-,18-,19-/m0/s1" 
Y5H InChIKey         InChI                1.03  JCNHSXPHCSYYCR-QZHFEQFPSA-N                                                                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y5H "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "3-[(3aS,4R,5S,8aS,8bR)-4-[2-(5-chlorothiophen-2-yl)-1,3-oxazol-4-yl]-1,3-dioxo-4,6,7,8,8a,8b-hexahydro-3aH-pyrrolo[3,4-a]pyrrolizin-2-yl]propyl-trimethyl-azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y5H "Create component"     2011-01-13 EBI  
Y5H "Modify aromatic_flag" 2011-06-04 RCSB 
Y5H "Modify descriptor"    2011-06-04 RCSB 
# 
