data_X5H
# 
_chem_comp.id                                    X5H 
_chem_comp.name                                  "(~{E})-6-(2-hydroxy-2-oxoethylamino)hex-4-enoic acid" 
_chem_comp.type                                  "peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C8 H13 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-31 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        187.193 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X5H 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4MZL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X5H C1  C1  C 0 1 N N N N N N 29.776 -7.613 19.055 -1.117 1.153  0.396  C1  X5H 1  
X5H C2  C2  C 0 1 N N N N N N 29.445 -8.956 19.628 -2.487 0.882  -0.171 C2  X5H 2  
X5H C3  C3  C 0 1 N N N N N N 29.290 -8.908 21.076 -3.133 -0.278 0.588  C3  X5H 3  
X5H C4  C4  C 0 1 N N N N N N 28.316 -7.833 21.412 -4.503 -0.549 0.022  C4  X5H 4  
X5H C11 C11 C 0 1 N N N N N N 28.963 -7.025 18.179 -0.071 1.156  -0.393 C11 X5H 5  
X5H O2  O2  O 0 1 N N N N N N 27.071 -7.978 21.114 -4.919 0.118  -0.896 O2  X5H 6  
X5H N   N   N 0 1 N N N Y Y N 28.148 -4.815 17.676 2.203  0.325  -0.182 N   X5H 7  
X5H CA  CA  C 0 1 N N N Y N N 27.321 -5.252 16.566 3.551  0.555  0.355  CA  X5H 8  
X5H C   C   C 0 1 N N N Y N Y 25.837 -5.124 16.853 4.447  -0.594 -0.030 C   X5H 9  
X5H O   O   O 0 1 N N N Y N Y 25.046 -4.750 15.972 4.009  -1.510 -0.684 O   X5H 10 
X5H C31 C31 C 0 1 N N N N N N 29.310 -5.693 17.616 1.299  1.427  0.174  C31 X5H 11 
X5H OXT O1  O 0 1 N Y N Y N Y 25.448 -5.433 18.087 5.733  -0.599 0.354  O1  X5H 12 
X5H O3  O3  O 0 1 N Y N N N N 28.730 -6.625 21.971 -5.260 -1.531 0.536  O3  X5H 13 
X5H H1  H1  H 0 1 N N N N N N 30.686 -7.115 19.356 -0.998 1.348  1.451  H1  X5H 14 
X5H H7  H2  H 0 1 N N N N N N 28.504 -9.311 19.182 -3.105 1.773  -0.068 H2  X5H 15 
X5H H3  H3  H 0 1 N N N N N N 30.256 -9.657 19.381 -2.399 0.622  -1.226 H3  X5H 16 
X5H H4  H4  H 0 1 N N N N N N 28.915 -9.876 21.441 -2.514 -1.170 0.484  H4  X5H 17 
X5H H5  H5  H 0 1 N N N N N N 30.260 -8.690 21.546 -3.221 -0.018 1.643  H5  X5H 18 
X5H H6  H6  H 0 1 N N N N N N 28.050 -7.517 17.877 -0.190 0.966  -1.449 H6  X5H 19 
X5H H   H7  H 0 1 N Y N Y Y N 28.419 -3.859 17.563 2.230  0.188  -1.182 H7  X5H 20 
X5H HA2 H9  H 0 1 N N N Y N N 27.548 -6.307 16.352 3.952  1.482  -0.055 H9  X5H 21 
X5H HA3 H10 H 0 1 N N N Y N N 27.563 -4.639 15.685 3.501  0.629  1.441  H10 X5H 22 
X5H H11 H11 H 0 1 N N N N N N 29.626 -5.810 16.569 1.684  2.360  -0.237 H11 X5H 23 
X5H H12 H12 H 0 1 N N N N N N 30.132 -5.252 18.200 1.234  1.507  1.259  H12 X5H 24 
X5H HXT H13 H 0 1 N Y N Y N Y 24.508 -5.320 18.161 6.269  -1.357 0.084  H13 X5H 25 
X5H H14 H14 H 0 1 N Y N N N N 27.984 -6.043 22.058 -6.131 -1.667 0.139  H14 X5H 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X5H O   C   DOUB N N 1  
X5H CA  C   SING N N 2  
X5H CA  N   SING N N 3  
X5H C31 N   SING N N 4  
X5H C31 C11 SING N N 5  
X5H C11 C1  DOUB N E 6  
X5H C1  C2  SING N N 7  
X5H C2  C3  SING N N 8  
X5H C3  C4  SING N N 9  
X5H O2  C4  DOUB N N 10 
X5H C   OXT SING N N 11 
X5H C4  O3  SING N N 12 
X5H C1  H1  SING N N 13 
X5H C2  H7  SING N N 14 
X5H C2  H3  SING N N 15 
X5H C3  H4  SING N N 16 
X5H C3  H5  SING N N 17 
X5H C11 H6  SING N N 18 
X5H N   H   SING N N 19 
X5H CA  HA2 SING N N 20 
X5H CA  HA3 SING N N 21 
X5H C31 H11 SING N N 22 
X5H C31 H12 SING N N 23 
X5H OXT HXT SING N N 24 
X5H O3  H14 SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X5H InChI            InChI                1.06  "InChI=1S/C8H13NO4/c10-7(11)4-2-1-3-5-9-6-8(12)13/h1,3,9H,2,4-6H2,(H,10,11)(H,12,13)/b3-1+" 
X5H InChIKey         InChI                1.06  NGHLUBBLFARTJA-HNQUOIGGSA-N                                                                 
X5H SMILES_CANONICAL CACTVS               3.385 "OC(=O)CC/C=C/CNCC(O)=O"                                                                    
X5H SMILES           CACTVS               3.385 "OC(=O)CCC=CCNCC(O)=O"                                                                      
X5H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CC(=O)O)/C=C/CNCC(=O)O"                                                                  
X5H SMILES           "OpenEye OEToolkits" 2.0.7 "C(CC(=O)O)C=CCNCC(=O)O"                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           X5H 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(~{E})-6-(2-hydroxy-2-oxoethylamino)hex-4-enoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X5H "Create component" 2023-05-31 RCSB 
X5H "Initial release"  2023-06-07 RCSB 
X5H "Modify backbone"  2023-11-03 PDBE 
X5H "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            X5H 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
