data_SXH
# 
_chem_comp.id                                    SXH 
_chem_comp.name                                  "S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] hexanethioate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H33 N2 O8 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-04-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        456.491 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SXH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2KGA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SXH O25  O25  O 0 1 N N N N N N -6.595 11.737 0.641  -5.336 -2.974 -1.195 O25  SXH 1  
SXH P24  P24  P 0 1 N N N N N N -6.507 13.251 0.370  -6.648 -2.514 -0.384 P24  SXH 2  
SXH O26  O26  O 0 1 N N N N N N -6.589 13.490 -1.174 -7.689 -2.072 -1.338 O26  SXH 3  
SXH O23  O23  O 0 1 N N N N N N -7.508 13.989 1.287  -7.205 -3.752 0.482  O23  SXH 4  
SXH O27  O27  O 0 1 N N N N N N -5.087 13.672 0.813  -6.271 -1.297 0.601  O27  SXH 5  
SXH C28  C28  C 0 1 N N N N N N -4.690 13.498 2.225  -5.847 -0.017 0.128  C28  SXH 6  
SXH C29  C29  C 0 1 N N N N N N -3.307 14.122 2.490  -5.571 0.901  1.321  C29  SXH 7  
SXH C30  C30  C 0 1 N N N N N N -2.890 13.661 3.871  -6.848 1.060  2.148  C30  SXH 8  
SXH C31  C31  C 0 1 N N N N N N -2.298 13.614 1.453  -4.472 0.289  2.192  C31  SXH 9  
SXH C32  C32  C 0 1 N N S N N N -3.400 15.722 2.416  -5.117 2.271  0.815  C32  SXH 10 
SXH O33  O33  O 0 1 N N N N N N -3.982 16.133 1.176  -6.190 2.898  0.110  O33  SXH 11 
SXH C34  C34  C 0 1 N N N N N N -2.038 16.387 2.468  -3.939 2.101  -0.110 C34  SXH 12 
SXH O35  O35  O 0 1 N N N N N N -1.563 16.859 1.428  -4.076 2.270  -1.303 O35  SXH 13 
SXH N36  N36  N 0 1 N N N N N N -1.432 16.456 3.622  -2.734 1.760  0.389  N36  SXH 14 
SXH C37  C37  C 0 1 N N N N N N -0.122 17.091 3.811  -1.566 1.704  -0.493 C37  SXH 15 
SXH C38  C38  C 0 1 N N N N N N 0.386  17.040 5.258  -0.334 1.295  0.318  C38  SXH 16 
SXH C39  C39  C 0 1 N N N N N N 0.894  15.681 5.746  0.868  1.237  -0.589 C39  SXH 17 
SXH O40  O40  O 0 1 N N N N N N 1.209  15.501 6.939  0.751  1.497  -1.768 O40  SXH 18 
SXH N41  N41  N 0 1 N N N N N N 0.976  14.745 4.835  2.072  0.897  -0.091 N41  SXH 19 
SXH C42  C42  C 0 1 N N N N N N 1.448  13.393 5.100  3.241  0.840  -0.972 C42  SXH 20 
SXH C43  C43  C 0 1 N N N N N N 1.065  12.405 4.021  4.472  0.432  -0.162 C43  SXH 21 
SXH S1   S1   S 0 1 N N N N N N 1.394  13.063 2.452  5.916  0.362  -1.251 S1   SXH 22 
SXH C1   C1   C 0 1 N N N N N N 1.424  11.551 1.575  7.117  -0.104 -0.124 C1   SXH 23 
SXH O1   O1   O 0 1 N N N N N N 1.440  10.430 2.122  6.822  -0.279 1.040  O1   SXH 24 
SXH C2   C2   C 0 1 N N N N N N 1.503  11.685 0.062  8.542  -0.297 -0.577 C2   SXH 25 
SXH C3   C3   C 0 1 N N N N N N 0.140  11.818 -0.610 9.405  -0.709 0.617  C3   SXH 26 
SXH C4   C4   C 0 1 N N N N N N -0.725 10.576 -0.369 10.851 -0.906 0.157  C4   SXH 27 
SXH C5   C5   C 0 1 N N N N N N -2.052 10.643 -1.117 11.714 -1.318 1.351  C5   SXH 28 
SXH C6   C6   C 0 1 N N N N N N -1.814 10.615 -2.614 13.160 -1.514 0.891  C6   SXH 29 
SXH H28  H28  H 0 1 N N N N N N -4.638 12.422 2.445  -4.937 -0.131 -0.461 H28  SXH 30 
SXH H28A H28A H 0 0 N N N N N N -5.434 13.990 2.869  -6.630 0.419  -0.492 H28A SXH 31 
SXH H30  H30  H 0 1 N N N N N N -3.653 13.963 4.604  -6.639 1.671  3.026  H30  SXH 32 
SXH H30A H30A H 0 0 N N N N N N -1.926 14.120 4.135  -7.615 1.544  1.543  H30A SXH 33 
SXH H30B H30B H 0 0 N N N N N N -2.789 12.566 3.878  -7.201 0.078  2.465  H30B SXH 34 
SXH H31  H31  H 0 1 N N N N N N -1.478 14.340 1.354  -3.605 0.057  1.573  H31  SXH 35 
SXH H31A H31A H 0 0 N N N N N N -1.893 12.645 1.780  -4.186 0.998  2.968  H31A SXH 36 
SXH H31B H31B H 0 0 N N N N N N -2.800 13.492 0.482  -4.843 -0.626 2.655  H31B SXH 37 
SXH H32  H32  H 0 1 N N N N N N -4.006 16.021 3.284  -4.826 2.893  1.662  H32  SXH 38 
SXH HO33 HO33 H 0 0 N N N N N N -4.922 16.224 1.282  -6.500 2.399  -0.658 HO33 SXH 39 
SXH HN36 HN36 H 0 0 N N N N N N -1.884 16.055 4.419  -2.641 1.552  1.332  HN36 SXH 40 
SXH H37  H37  H 0 1 N N N N N N 0.606  16.567 3.175  -1.741 0.972  -1.282 H37  SXH 41 
SXH H37A H37A H 0 0 N N N N N N -0.236 18.152 3.545  -1.399 2.685  -0.938 H37A SXH 42 
SXH H38  H38  H 0 1 N N N N N N 1.223  17.750 5.336  -0.160 2.027  1.107  H38  SXH 43 
SXH H38A H38A H 0 0 N N N N N N -0.483 17.279 5.889  -0.501 0.314  0.763  H38A SXH 44 
SXH HN41 HN41 H 0 0 N N N N N N 0.698  14.972 3.902  2.166  0.689  0.852  HN41 SXH 45 
SXH H42  H42  H 0 1 N N N N N N 2.546  13.419 5.169  3.066  0.109  -1.761 H42  SXH 46 
SXH H42A H42A H 0 0 N N N N N N 0.976  13.058 6.035  3.408  1.821  -1.417 H42A SXH 47 
SXH H43  H43  H 0 1 N N N N N N 1.648  11.482 4.154  4.647  1.163  0.627  H43  SXH 48 
SXH H43A H43A H 0 0 N N N N N N -0.011 12.191 4.099  4.306  -0.549 0.283  H43A SXH 49 
SXH H2   H2   H 0 1 N N N N N N 2.089  12.586 -0.172 8.578  -1.077 -1.338 H2   SXH 50 
SXH H2A  H2A  H 0 1 N N N N N N 1.967  10.765 -0.322 8.920  0.636  -0.994 H2A  SXH 51 
SXH H3   H3   H 0 1 N N N N N N -0.376 12.696 -0.195 9.368  0.070  1.378  H3   SXH 52 
SXH H3A  H3A  H 0 1 N N N N N N 0.296  11.928 -1.693 9.026  -1.643 1.034  H3A  SXH 53 
SXH H4   H4   H 0 1 N N N N N N -0.945 10.520 0.707  10.887 -1.685 -0.604 H4   SXH 54 
SXH H4A  H4A  H 0 1 N N N N N N -0.172 9.691  -0.716 11.229 0.027  -0.260 H4A  SXH 55 
SXH H5   H5   H 0 1 N N N N N N -2.671 9.779  -0.833 11.678 -0.538 2.112  H5   SXH 56 
SXH H5A  H5A  H 0 1 N N N N N N -2.565 11.580 -0.853 11.336 -2.251 1.768  H5A  SXH 57 
SXH H6   H6   H 0 1 N N N N N N -1.247 9.710  -2.878 13.197 -2.293 0.130  H6   SXH 58 
SXH H6A  H6A  H 0 1 N N N N N N -1.242 11.506 -2.911 13.539 -0.581 0.474  H6A  SXH 59 
SXH H6B  H6B  H 0 1 N N N N N N -2.780 10.608 -3.139 13.776 -1.808 1.742  H6B  SXH 60 
SXH HO25 HO25 H 0 0 N N N N N N -6.613 11.268 -0.185 -4.611 -3.277 -0.632 HO25 SXH 61 
SXH HO23 HO23 H 0 0 N N N N N N -7.109 14.140 2.136  -7.452 -4.523 -0.047 HO23 SXH 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SXH P24  O25  SING N N 1  
SXH O25  HO25 SING N N 2  
SXH O26  P24  DOUB N N 3  
SXH P24  O27  SING N N 4  
SXH P24  O23  SING N N 5  
SXH O23  HO23 SING N N 6  
SXH O27  C28  SING N N 7  
SXH C28  H28A SING N N 8  
SXH C28  C29  SING N N 9  
SXH C28  H28  SING N N 10 
SXH C31  C29  SING N N 11 
SXH C32  C29  SING N N 12 
SXH C29  C30  SING N N 13 
SXH C30  H30B SING N N 14 
SXH C30  H30A SING N N 15 
SXH C30  H30  SING N N 16 
SXH H31B C31  SING N N 17 
SXH C31  H31  SING N N 18 
SXH C31  H31A SING N N 19 
SXH O33  C32  SING N N 20 
SXH C32  C34  SING N N 21 
SXH C32  H32  SING N N 22 
SXH HO33 O33  SING N N 23 
SXH O35  C34  DOUB N N 24 
SXH C34  N36  SING N N 25 
SXH N36  C37  SING N N 26 
SXH N36  HN36 SING N N 27 
SXH H37  C37  SING N N 28 
SXH H37A C37  SING N N 29 
SXH C37  C38  SING N N 30 
SXH C38  H38  SING N N 31 
SXH C38  C39  SING N N 32 
SXH C38  H38A SING N N 33 
SXH N41  C39  SING N N 34 
SXH C39  O40  DOUB N N 35 
SXH HN41 N41  SING N N 36 
SXH N41  C42  SING N N 37 
SXH C43  C42  SING N N 38 
SXH C42  H42  SING N N 39 
SXH C42  H42A SING N N 40 
SXH S1   C43  SING N N 41 
SXH C43  H43  SING N N 42 
SXH C43  H43A SING N N 43 
SXH C1   S1   SING N N 44 
SXH C2   C1   SING N N 45 
SXH C1   O1   DOUB N N 46 
SXH C3   C2   SING N N 47 
SXH H2   C2   SING N N 48 
SXH H2A  C2   SING N N 49 
SXH H3   C3   SING N N 50 
SXH C3   C4   SING N N 51 
SXH C3   H3A  SING N N 52 
SXH C5   C4   SING N N 53 
SXH H4A  C4   SING N N 54 
SXH C4   H4   SING N N 55 
SXH C6   C5   SING N N 56 
SXH C5   H5   SING N N 57 
SXH C5   H5A  SING N N 58 
SXH H6B  C6   SING N N 59 
SXH H6A  C6   SING N N 60 
SXH H6   C6   SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SXH SMILES           ACDLabs              10.04 "O=C(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)O)CCCCC"                                                                                                                    
SXH SMILES_CANONICAL CACTVS               3.341 "CCCCCC(=O)SCCNC(=O)CCNC(=O)[C@@H](O)C(C)(C)CO[P](O)(O)=O"                                                                                                             
SXH SMILES           CACTVS               3.341 "CCCCCC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O"                                                                                                               
SXH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](C(C)(C)COP(=O)(O)O)O"                                                                                                                
SXH SMILES           "OpenEye OEToolkits" 1.5.0 "CCCCCC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O"                                                                                                                    
SXH InChI            InChI                1.03  "InChI=1S/C17H33N2O8PS/c1-4-5-6-7-14(21)29-11-10-18-13(20)8-9-19-16(23)15(22)17(2,3)12-27-28(24,25)26/h15,22H,4-12H2,1-3H3,(H,18,20)(H,19,23)(H2,24,25,26)/t15-/m1/s1" 
SXH InChIKey         InChI                1.03  KGMBPSVUBJAAEN-OAHLLOKOSA-N                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SXH "SYSTEMATIC NAME" ACDLabs              10.04 "S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] hexanethioate"  
SXH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "S-[2-[3-[[(2S)-2-hydroxy-3,3-dimethyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] hexanethioate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SXH "Create component"  2009-04-01 RCSB 
SXH "Modify descriptor" 2011-06-04 RCSB 
SXH "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            SXH 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P24 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
