data_L6H
# 
_chem_comp.id                                    L6H 
_chem_comp.name                                  "[2-[3-(cyclooct-4-en-1-yloxycarbonylamino)propylamino]-2-oxidanylidene-ethyl] (~{E})-4-[(2-oxidanylidene-5,6,7,8-tetrahydro-1~{H}-quinolin-3-yl)carbonylamino]but-2-enoate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H38 N4 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-07-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        542.624 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     L6H 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6SC7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
L6H C10 C1  C 0 1 N N N N N N -41.243 59.368 56.585 10.257  0.382  0.862  C10 L6H 1  
L6H C15 C2  C 0 1 N N N N N N -42.253 60.069 61.474 5.700   2.143  0.292  C15 L6H 2  
L6H C17 C3  C 0 1 N N N N N N -44.721 60.257 60.799 3.287   1.710  0.095  C17 L6H 3  
L6H C20 C4  C 0 1 N N N N N N -48.200 59.845 62.123 -0.256  0.976  -0.913 C20 L6H 4  
L6H C21 C5  C 0 1 N N N N N N -48.974 58.530 62.264 -1.493  0.885  -0.058 C21 L6H 5  
L6H C24 C6  C 0 1 N N N N N N -49.386 58.715 58.956 -5.095  0.195  -0.675 C24 L6H 6  
L6H C01 C7  C 0 1 N N N N N N -40.691 59.165 54.107 12.616  -0.342 1.142  C01 L6H 7  
L6H C02 C8  C 0 1 N N N N N N -39.776 58.403 53.173 13.445  -1.621 1.059  C02 L6H 8  
L6H C03 C9  C 0 1 N N N N N N -40.037 56.897 53.234 13.399  -2.129 -0.387 C03 L6H 9  
L6H C04 C10 C 0 1 N N N N N N -39.837 56.339 54.661 11.984  -2.624 -0.676 C04 L6H 10 
L6H C05 C11 C 0 1 N N N N N N -40.381 57.283 55.777 10.965  -1.579 -0.294 C05 L6H 11 
L6H C06 C12 C 0 1 N N N N N N -40.761 58.566 55.511 11.252  -0.549 0.535  C06 L6H 12 
L6H C08 C13 C 0 1 N N N N N N -40.902 57.495 58.063 8.731   -0.844 -0.550 C08 L6H 13 
L6H C09 C14 C 0 1 N N N N N N -41.315 58.813 57.860 8.982   0.244  0.326  C09 L6H 14 
L6H C11 C15 C 0 1 N N N N N N -41.826 59.673 59.017 7.917   1.202  0.660  C11 L6H 15 
L6H C16 C16 C 0 1 N N N N N N -43.702 59.749 61.825 4.466   1.825  -0.512 C16 L6H 16 
L6H N07 N1  N 0 1 N N N N N N -40.458 56.784 57.037 9.717   -1.712 -0.825 N07 L6H 17 
L6H N14 N2  N 0 1 N N N N N N -41.751 59.209 60.397 6.721   1.123  0.043  N14 L6H 18 
L6H O12 O1  O 0 1 N N N N N N -40.961 56.928 59.338 7.625   -0.995 -1.040 O12 L6H 19 
L6H O13 O2  O 0 1 N N N N N N -42.295 60.730 58.775 8.116   2.066  1.493  O13 L6H 20 
L6H C18 C17 C 0 1 N N N N N N -46.082 60.579 61.422 2.084   1.400  -0.690 C18 L6H 21 
L6H C23 C18 C 0 1 N N N N N N -48.449 57.912 59.863 -3.887  0.519  0.208  C23 L6H 22 
L6H C25 C19 C 0 1 N N N N N N -48.781 58.964 57.574 -6.351  0.103  0.193  C25 L6H 23 
L6H C27 C20 C 0 1 N N N N N N -46.348 59.484 57.170 -8.729  -0.338 -0.100 C27 L6H 24 
L6H C29 C21 C 0 1 N N S N N N -44.743 57.801 56.944 -11.078 -0.748 -0.214 C29 L6H 25 
L6H C33 C22 C 0 1 N N N N N N -44.078 57.606 55.559 -11.258 -2.207 0.259  C33 L6H 26 
L6H C34 C23 C 0 1 N N N N N N -43.931 54.396 56.842 -14.073 0.667  0.172  C34 L6H 27 
L6H C35 C24 C 0 1 N N N N N N -45.043 55.241 57.474 -12.862 0.985  -0.741 C35 L6H 28 
L6H C36 C25 C 0 1 N N N N N N -44.589 56.628 57.937 -12.181 -0.328 -1.184 C36 L6H 29 
L6H C37 C26 C 0 1 N N N N N N -44.902 56.851 54.515 -12.122 -2.240 1.547  C37 L6H 30 
L6H C38 C27 C 0 1 N N N N N N -44.742 55.327 54.586 -13.315 -1.457 1.066  C38 L6H 31 
L6H C39 C28 C 0 1 N N N N N N -43.554 54.836 55.422 -13.390 -0.203 1.196  C39 L6H 32 
L6H N22 N3  N 0 1 N N N N N N -49.089 57.610 61.137 -2.684  0.607  -0.623 N22 L6H 33 
L6H N26 N4  N 0 1 N N N N N N -47.656 59.881 57.663 -7.507  -0.208 -0.652 N26 L6H 34 
L6H O19 O3  O 0 1 N N N N N N -46.821 59.585 62.087 0.890   1.284  -0.075 O19 L6H 35 
L6H O28 O4  O 0 1 N N N N N N -46.101 58.162 56.775 -9.792  -0.623 -0.877 O28 L6H 36 
L6H O30 O5  O 0 1 N N N N N N -46.527 61.677 61.343 2.165   1.249  -1.893 O30 L6H 37 
L6H O31 O6  O 0 1 N N N N N N -49.505 58.267 63.291 -1.417  1.062  1.140  O31 L6H 38 
L6H O32 O7  O 0 1 N N N N N N -45.479 60.288 57.102 -8.873  -0.198 1.098  O32 L6H 39 
L6H H1  H1  H 0 1 N N N N N N -41.548 60.390 56.413 10.479  1.202  1.530  H1  L6H 40 
L6H H2  H2  H 0 1 N N N N N N -41.629 59.921 62.368 6.083   3.120  -0.001 H2  L6H 41 
L6H H3  H3  H 0 1 N N N N N N -42.188 61.119 61.151 5.449   2.155  1.353  H3  L6H 42 
L6H H4  H4  H 0 1 N N N N N N -44.502 60.375 59.748 3.215   1.845  1.164  H4  L6H 43 
L6H H6  H6  H 0 1 N N N N N N -48.426 60.496 62.981 -0.092  0.024  -1.417 H6  L6H 44 
L6H H7  H7  H 0 1 N N N N N N -48.501 60.348 61.192 -0.384  1.763  -1.656 H7  L6H 45 
L6H H8  H8  H 0 1 N N N N N N -49.594 59.685 59.432 -5.223  0.982  -1.418 H8  L6H 46 
L6H H9  H9  H 0 1 N N N N N N -50.326 58.157 58.836 -4.931  -0.758 -1.179 H9  L6H 47 
L6H H10 H10 H 0 1 N N N N N N -40.325 60.199 54.187 12.503  -0.054 2.187  H10 L6H 48 
L6H H11 H11 H 0 1 N N N N N N -41.704 59.167 53.678 13.131  0.454  0.604  H11 L6H 49 
L6H H12 H12 H 0 1 N N N N N N -38.732 58.596 53.460 14.476  -1.410 1.342  H12 L6H 50 
L6H H13 H13 H 0 1 N N N N N N -39.944 58.753 52.144 13.027  -2.375 1.727  H13 L6H 51 
L6H H14 H14 H 0 1 N N N N N N -41.072 56.702 52.917 13.651  -1.317 -1.070 H14 L6H 52 
L6H H15 H15 H 0 1 N N N N N N -39.342 56.387 52.551 14.108  -2.947 -0.512 H15 L6H 53 
L6H H16 H16 H 0 1 N N N N N N -40.360 55.374 54.735 11.891  -2.845 -1.739 H16 L6H 54 
L6H H17 H17 H 0 1 N N N N N N -38.761 56.186 54.828 11.799  -3.532 -0.103 H17 L6H 55 
L6H H19 H19 H 0 1 N N N N N N -43.985 59.212 62.718 4.538   1.691  -1.581 H19 L6H 56 
L6H H21 H21 H 0 1 N N N N N N -41.361 58.313 60.607 6.537   0.390  -0.565 H21 L6H 57 
L6H H22 H22 H 0 1 N N N N N N -48.183 56.970 59.362 -4.051  1.471  0.712  H22 L6H 58 
L6H H23 H23 H 0 1 N N N N N N -47.537 58.499 60.048 -3.759  -0.268 0.951  H23 L6H 59 
L6H H24 H24 H 0 1 N N N N N N -49.549 59.397 56.916 -6.222  -0.684 0.936  H24 L6H 60 
L6H H25 H25 H 0 1 N N N N N N -48.435 58.008 57.154 -6.515  1.055  0.698  H25 L6H 61 
L6H H26 H26 H 0 1 N N N N N N -44.230 58.657 57.406 -11.097 -0.088 0.653  H26 L6H 62 
L6H H27 H27 H 0 1 N N N N N N -43.140 57.051 55.712 -11.753 -2.783 -0.523 H27 L6H 63 
L6H H28 H28 H 0 1 N N N N N N -43.852 58.603 55.152 -10.281 -2.643 0.468  H28 L6H 64 
L6H H29 H29 H 0 1 N N N N N N -44.269 53.350 56.803 -14.476 1.572  0.627  H29 L6H 65 
L6H H30 H30 H 0 1 N N N N N N -43.036 54.469 57.477 -14.845 0.118  -0.367 H30 L6H 66 
L6H H31 H31 H 0 1 N N N N N N -45.843 55.370 56.731 -13.205 1.530  -1.621 H31 L6H 67 
L6H H32 H32 H 0 1 N N N N N N -45.436 54.698 58.346 -12.146 1.597  -0.194 H32 L6H 68 
L6H H33 H33 H 0 1 N N N N N N -43.523 56.555 58.197 -11.748 -0.187 -2.175 H33 L6H 69 
L6H H34 H34 H 0 1 N N N N N N -45.169 56.881 58.837 -12.930 -1.118 -1.235 H34 L6H 70 
L6H H35 H35 H 0 1 N N N N N N -44.588 57.187 53.516 -12.397 -3.260 1.815  H35 L6H 71 
L6H H36 H36 H 0 1 N N N N N N -45.964 57.096 54.667 -11.622 -1.736 2.374  H36 L6H 72 
L6H H37 H37 H 0 1 N N N N N N -45.417 54.649 54.084 -14.131 -1.984 0.594  H37 L6H 73 
L6H H39 H39 H 0 1 N N N N N N -42.543 54.803 55.045 -12.952 0.260  2.067  H39 L6H 74 
L6H H41 H41 H 0 1 N N N N N N -49.612 56.764 61.240 -2.745  0.466  -1.581 H41 L6H 75 
L6H H42 H42 H 0 1 N N N N N N -47.783 60.788 58.065 -7.392  -0.320 -1.608 H42 L6H 76 
L6H H5  H5  H 0 1 N N N N N N -40.168 55.841 57.197 9.536   -2.455 -1.423 H5  L6H 77 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
L6H C02 C03 SING N N 1  
L6H C02 C01 SING N N 2  
L6H C03 C04 SING N N 3  
L6H C01 C06 SING N N 4  
L6H C37 C38 SING N N 5  
L6H C37 C33 SING N N 6  
L6H C38 C39 DOUB N E 7  
L6H C04 C05 SING N N 8  
L6H C39 C34 SING N N 9  
L6H C06 C05 DOUB N N 10 
L6H C06 C10 SING N N 11 
L6H C33 C29 SING N N 12 
L6H C05 N07 SING N N 13 
L6H C10 C09 DOUB N N 14 
L6H O28 C29 SING N N 15 
L6H O28 C27 SING N N 16 
L6H C34 C35 SING N N 17 
L6H C29 C36 SING N N 18 
L6H N07 C08 SING N N 19 
L6H O32 C27 DOUB N N 20 
L6H C27 N26 SING N N 21 
L6H C35 C36 SING N N 22 
L6H C25 N26 SING N N 23 
L6H C25 C24 SING N N 24 
L6H C09 C08 SING N N 25 
L6H C09 C11 SING N N 26 
L6H C08 O12 DOUB N N 27 
L6H O13 C11 DOUB N N 28 
L6H C24 C23 SING N N 29 
L6H C11 N14 SING N N 30 
L6H C23 N22 SING N N 31 
L6H N14 C15 SING N N 32 
L6H C17 C18 SING N N 33 
L6H C17 C16 DOUB N E 34 
L6H N22 C21 SING N N 35 
L6H O30 C18 DOUB N N 36 
L6H C18 O19 SING N N 37 
L6H C15 C16 SING N N 38 
L6H O19 C20 SING N N 39 
L6H C20 C21 SING N N 40 
L6H C21 O31 DOUB N N 41 
L6H C10 H1  SING N N 42 
L6H C15 H2  SING N N 43 
L6H C15 H3  SING N N 44 
L6H C17 H4  SING N N 45 
L6H C20 H6  SING N N 46 
L6H C20 H7  SING N N 47 
L6H C24 H8  SING N N 48 
L6H C24 H9  SING N N 49 
L6H C01 H10 SING N N 50 
L6H C01 H11 SING N N 51 
L6H C02 H12 SING N N 52 
L6H C02 H13 SING N N 53 
L6H C03 H14 SING N N 54 
L6H C03 H15 SING N N 55 
L6H C04 H16 SING N N 56 
L6H C04 H17 SING N N 57 
L6H C16 H19 SING N N 58 
L6H N14 H21 SING N N 59 
L6H C23 H22 SING N N 60 
L6H C23 H23 SING N N 61 
L6H C25 H24 SING N N 62 
L6H C25 H25 SING N N 63 
L6H C29 H26 SING N N 64 
L6H C33 H27 SING N N 65 
L6H C33 H28 SING N N 66 
L6H C34 H29 SING N N 67 
L6H C34 H30 SING N N 68 
L6H C35 H31 SING N N 69 
L6H C35 H32 SING N N 70 
L6H C36 H33 SING N N 71 
L6H C36 H34 SING N N 72 
L6H C37 H35 SING N N 73 
L6H C37 H36 SING N N 74 
L6H C38 H37 SING N N 75 
L6H C39 H39 SING N N 76 
L6H N22 H41 SING N N 77 
L6H N26 H42 SING N N 78 
L6H N07 H5  SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
L6H InChI            InChI                1.03  "InChI=1S/C28H38N4O7/c33-24(29-16-9-17-31-28(37)39-21-11-4-2-1-3-5-12-21)19-38-25(34)14-8-15-30-26(35)22-18-20-10-6-7-13-23(20)32-27(22)36/h1-2,8,14,18,21H,3-7,9-13,15-17,19H2,(H,29,33)(H,30,35)(H,31,37)(H,32,36)/b2-1?,14-8+/t21-/m1/s1" 
L6H InChIKey         InChI                1.03  XBCNCWLUITUPGM-PESUWNSQSA-N                                                                                                                                                                                                                  
L6H SMILES_CANONICAL CACTVS               3.385 "O=C(COC(=O)\C=C\CNC(=O)C1=CC2=C(CCCC2)NC1=O)NCCCNC(=O)O[C@H]3CCC/C=C/CC3"                                                                                                                                                                   
L6H SMILES           CACTVS               3.385 "O=C(COC(=O)C=CCNC(=O)C1=CC2=C(CCCC2)NC1=O)NCCCNC(=O)O[CH]3CCCC=CCC3"                                                                                                                                                                        
L6H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CCC2=C(C1)C=C(C(=O)N2)C(=O)NC/C=C/C(=O)OCC(=O)NCCCNC(=O)OC3CCCC=CCC3"                                                                                                                                                                     
L6H SMILES           "OpenEye OEToolkits" 2.0.7 "C1CCC2=C(C1)C=C(C(=O)N2)C(=O)NCC=CC(=O)OCC(=O)NCCCNC(=O)OC3CCCC=CCC3"                                                                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           L6H 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[2-[3-(cyclooct-4-en-1-yloxycarbonylamino)propylamino]-2-oxidanylidene-ethyl] (~{E})-4-[(2-oxidanylidene-5,6,7,8-tetrahydro-1~{H}-quinolin-3-yl)carbonylamino]but-2-enoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
L6H "Create component" 2019-07-23 EBI  
L6H "Initial release"  2019-11-27 RCSB 
L6H "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            L6H 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C16 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
