data_A1ILH
# 
_chem_comp.id                                    A1ILH 
_chem_comp.name                                  "(2R,3S,7S,10S,E)-10-(3-aminopropyl)-2,7-dimethylspiro[3,8,11-triaza-1(2,7)-quinolina-5(3,1)-pyridazinacyclopentadecaphanene-13,5'-[1,3]dioxan]-14-ene-4,6,9,12-tetraone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H41 N7 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-08-19 
_chem_comp.pdbx_modified_date                    2024-11-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        607.701 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ILH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9GHY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ILH CAY C1  C 0 1 N N N N N N -0.059 23.706 -4.195 -5.390 0.457  -0.498 CAY A1ILH 1  
A1ILH OAZ O1  O 0 1 N N N N N N -1.368 24.213 -3.987 -6.635 0.083  0.091  OAZ A1ILH 2  
A1ILH CBA C2  C 0 1 N N N N N N -1.764 24.389 -2.552 -6.668 -1.253 0.593  CBA A1ILH 3  
A1ILH OBB O2  O 0 1 N N N N N N -1.521 23.180 -1.693 -5.764 -1.395 1.687  OBB A1ILH 4  
A1ILH CBC C3  C 0 1 N N N N N N -0.284 22.525 -1.934 -4.760 -0.383 1.767  CBC A1ILH 5  
A1ILH CAX C4  C 0 1 N N N N N N -0.102 22.260 -3.462 -4.242 -0.067 0.364  CAX A1ILH 6  
A1ILH CBD C5  C 0 1 N N N N N N -1.091 21.331 -3.985 -3.680 -1.334 -0.240 CBD A1ILH 7  
A1ILH OBE O3  O 0 1 N N N N N N -1.771 20.572 -3.154 -3.820 -1.584 -1.418 OBE A1ILH 8  
A1ILH NBF N1  N 0 1 N N N N N N -1.174 21.061 -5.345 -3.007 -2.188 0.592  NBF A1ILH 9  
A1ILH CAW C6  C 0 1 N N N N N N 1.209  21.649 -3.715 -3.159 0.978  0.448  CAW A1ILH 10 
A1ILH CAV C7  C 0 1 N N N N N N 1.588  20.332 -3.392 -3.381 2.242  0.106  CAV A1ILH 11 
A1ILH CAS C8  C 0 1 Y N N N N N 2.830  19.627 -3.746 -2.215 3.149  0.065  CAS A1ILH 12 
A1ILH CAR C9  C 0 1 Y N N N N N 2.945  18.369 -3.243 -0.954 2.601  0.252  CAR A1ILH 13 
A1ILH CAN C10 C 0 1 Y N N N N N 4.036  17.548 -3.467 0.180  3.423  0.186  CAN A1ILH 14 
A1ILH NAM N2  N 0 1 Y N N N N N 4.012  16.332 -2.884 1.407  2.905  0.312  NAM A1ILH 15 
A1ILH CAT C11 C 0 1 Y N N N N N 3.911  20.058 -4.583 -2.368 4.528  -0.147 CAT A1ILH 16 
A1ILH CAU C12 C 0 1 Y N N N N N 5.077  19.268 -4.860 -1.283 5.347  -0.186 CAU A1ILH 17 
A1ILH CAO C13 C 0 1 Y N N N N N 5.128  17.967 -4.245 0.008  4.814  -0.024 CAO A1ILH 18 
A1ILH CAP C14 C 0 1 Y N N N N N 6.208  17.050 -4.390 1.150  5.635  -0.074 CAP A1ILH 19 
A1ILH CAQ C15 C 0 1 Y N N N N N 6.118  15.778 -3.871 2.374  5.049  0.056  CAQ A1ILH 20 
A1ILH CAK C16 C 0 1 Y N N N N N 4.979  15.410 -3.107 2.472  3.669  0.241  CAK A1ILH 21 
A1ILH CAJ C17 C 0 1 N N R N N N 4.776  14.085 -2.559 3.839  3.059  0.331  CAJ A1ILH 22 
A1ILH CAL C18 C 0 1 N N N N N N 5.003  14.030 -1.038 4.725  3.934  1.220  CAL A1ILH 23 
A1ILH NAI N3  N 0 1 N N N N N N 3.382  13.633 -2.832 3.764  1.702  0.905  NAI A1ILH 24 
A1ILH C   C19 C 0 1 N N N N N N 2.834  13.655 -4.058 4.041  0.693  0.032  C   A1ILH 25 
A1ILH O   O4  O 0 1 N N N N N N 3.520  13.956 -5.051 3.647  0.784  -1.111 O   A1ILH 26 
A1ILH CA  C20 C 0 1 N N S N N N 1.379  13.425 -4.123 4.817  -0.526 0.434  CA  A1ILH 27 
A1ILH N   N4  N 0 1 N N N N N N 0.865  14.490 -5.012 3.967  -1.572 0.959  N   A1ILH 28 
A1ILH CB  C21 C 0 1 N N N N N N 0.985  12.036 -4.569 5.633  -1.027 -0.757 CB  A1ILH 29 
A1ILH CAB C22 C 0 1 N N N N N N -0.541 11.961 -4.752 6.347  -2.329 -0.379 CAB A1ILH 30 
A1ILH CAC C23 C 0 1 N N N N N N -1.027 13.060 -5.599 5.272  -3.375 -0.077 CAC A1ILH 31 
A1ILH NAD N5  N 0 1 N N R N N N -0.531 14.386 -5.140 4.014  -2.720 0.262  NAD A1ILH 32 
A1ILH CBL C24 C 0 1 N N N N N N -1.284 15.448 -4.851 2.845  -3.323 -0.103 CBL A1ILH 33 
A1ILH OBN O5  O 0 1 N N N N N N -2.501 15.391 -4.921 2.799  -4.110 -1.024 OBN A1ILH 34 
A1ILH CBK C25 C 0 1 N N S N N N -0.667 16.719 -4.371 1.617  -2.966 0.691  CBK A1ILH 35 
A1ILH CBM C26 C 0 1 N N N N N N -0.520 16.616 -2.834 1.585  -3.804 1.971  CBM A1ILH 36 
A1ILH NBI N6  N 0 1 N N N N N N -1.440 17.893 -4.731 0.391  -3.227 -0.091 NBI A1ILH 37 
A1ILH CBH C27 C 0 1 N N N N N N -1.205 18.676 -5.817 -0.771 -3.131 0.602  CBH A1ILH 38 
A1ILH OBJ O6  O 0 1 N N N N N N -0.278 18.374 -6.589 -0.735 -3.025 1.810  OBJ A1ILH 39 
A1ILH CBG C28 C 0 1 N N S N N N -2.027 19.897 -5.848 -2.102 -3.149 -0.097 CBG A1ILH 40 
A1ILH CBO C29 C 0 1 N N N N N N -2.603 20.165 -7.261 -1.922 -2.730 -1.558 CBO A1ILH 41 
A1ILH CBP C30 C 0 1 N N N N N N -3.356 21.548 -7.231 -1.388 -1.297 -1.615 CBP A1ILH 42 
A1ILH CBQ C31 C 0 1 N N N N N N -3.690 22.096 -8.591 -1.335 -0.831 -3.072 CBQ A1ILH 43 
A1ILH NBR N7  N 0 1 N N N N N N -4.465 23.346 -8.446 -0.822 0.545  -3.127 NBR A1ILH 44 
A1ILH HAY H1  H 0 1 N N N N N N 0.156  23.598 -5.268 -5.318 0.029  -1.498 HAY A1ILH 45 
A1ILH HB7 H2  H 0 1 N N N N N N 0.695  24.360 -3.734 -5.330 1.543  -0.563 HB7 A1ILH 46 
A1ILH HBA H3  H 0 1 N N N N N N -1.189 25.229 -2.136 -7.678 -1.488 0.928  HBA A1ILH 47 
A1ILH HB8 H4  H 0 1 N N N N N N -2.837 24.627 -2.517 -6.384 -1.944 -0.201 HB8 A1ILH 48 
A1ILH HB9 H5  H 0 1 N N N N N N -0.270 21.566 -1.395 -5.187 0.518  2.208  HB9 A1ILH 49 
A1ILH HBC H6  H 0 1 N N N N N N 0.539  23.160 -1.575 -3.937 -0.736 2.388  HBC A1ILH 50 
A1ILH HBF H7  H 0 1 N N N N N N -0.674 21.630 -5.997 -3.111 -2.169 1.556  HBF A1ILH 51 
A1ILH HAW H8  H 0 1 N N N N N N 1.953  22.268 -4.194 -2.180 0.705  0.819  HAW A1ILH 52 
A1ILH HAV H9  H 0 1 N N N N N N 0.876  19.767 -2.810 -4.355 2.590  -0.181 HAV A1ILH 53 
A1ILH HAR H10 H 0 1 N N N N N N 2.138  17.989 -2.634 -0.846 1.544  0.447  HAR A1ILH 54 
A1ILH HAT H11 H 0 1 N N N N N N 3.844  21.038 -5.033 -3.357 4.942  -0.282 HAT A1ILH 55 
A1ILH HAU H12 H 0 1 N N N N N N 5.872  19.630 -5.495 -1.413 6.408  -0.343 HAU A1ILH 56 
A1ILH HAP H13 H 0 1 N N N N N N 7.104  17.355 -4.911 1.059  6.702  -0.211 HAP A1ILH 57 
A1ILH HAQ H14 H 0 1 N N N N N N 6.909  15.064 -4.044 3.269  5.653  0.015  HAQ A1ILH 58 
A1ILH HAJ H15 H 0 1 N N N N N N 5.476  13.383 -3.036 4.275  3.003  -0.666 HAJ A1ILH 59 
A1ILH HAL H16 H 0 1 N N N N N N 4.836  13.004 -0.679 4.288  3.999  2.217  HAL A1ILH 60 
A1ILH HB5 H17 H 0 1 N N N N N N 6.035  14.334 -0.810 5.720  3.493  1.288  HB5 A1ILH 61 
A1ILH HB6 H18 H 0 1 N N N N N N 4.301  14.713 -0.538 4.799  4.932  0.789  HB6 A1ILH 62 
A1ILH HAI H19 H 0 1 N N N N N N 2.830  13.298 -2.068 3.535  1.540  1.833  HAI A1ILH 63 
A1ILH HA  H20 H 0 1 N N N N N N 0.961  13.586 -3.119 5.533  -0.208 1.223  HA  A1ILH 64 
A1ILH H   H21 H 0 1 N N N N N N 1.287  14.399 -5.914 3.016  -1.248 1.059  H   A1ILH 65 
A1ILH HB2 H22 H 0 1 N N N N N N 1.298  11.306 -3.808 4.969  -1.209 -1.602 HB2 A1ILH 66 
A1ILH HB1 H23 H 0 1 N N N N N N 1.479  11.805 -5.524 6.372  -0.275 -1.033 HB1 A1ILH 67 
A1ILH HB3 H24 H 0 1 N N N N N N -1.025 12.026 -3.766 6.967  -2.666 -1.210 HB3 A1ILH 68 
A1ILH HAB H25 H 0 1 N N N N N N -0.799 11.002 -5.225 6.966  -2.169 0.503  HAB A1ILH 69 
A1ILH HB4 H26 H 0 1 N N N N N N -2.127 13.066 -5.575 5.125  -4.006 -0.954 HB4 A1ILH 70 
A1ILH HAC H27 H 0 1 N N N N N N -0.683 12.891 -6.630 5.594  -3.993 0.760  HAC A1ILH 71 
A1ILH HBK H28 H 0 1 N N N N N N 0.341  16.805 -4.802 1.656  -1.909 0.955  HBK A1ILH 72 
A1ILH HCA H29 H 0 1 N N N N N N -0.067 17.540 -2.446 2.585  -3.846 2.403  HCA A1ILH 73 
A1ILH HCB H30 H 0 1 N N N N N N -1.512 16.475 -2.380 0.900  -3.348 2.686  HCB A1ILH 74 
A1ILH HBM H31 H 0 1 N N N N N N 0.123  15.759 -2.584 1.247  -4.813 1.737  HBM A1ILH 75 
A1ILH HBI H32 H 0 1 N N N N N N -2.203 18.145 -4.136 0.416  -3.451 -1.035 HBI A1ILH 76 
A1ILH HBG H33 H 0 1 N N N N N N -2.874 19.771 -5.158 -2.527 -4.152 -0.052 HBG A1ILH 77 
A1ILH HCC H34 H 0 1 N N N N N N -3.306 19.364 -7.535 -1.215 -3.401 -2.045 HCC A1ILH 78 
A1ILH HBO H35 H 0 1 N N N N N N -1.785 20.202 -7.996 -2.883 -2.780 -2.071 HBO A1ILH 79 
A1ILH HCD H36 H 0 1 N N N N N N -2.717 22.278 -6.712 -2.046 -0.641 -1.047 HCD A1ILH 80 
A1ILH HBP H37 H 0 1 N N N N N N -4.294 21.418 -6.671 -0.386 -1.266 -1.188 HBP A1ILH 81 
A1ILH HCE H38 H 0 1 N N N N N N -4.287 21.358 -9.147 -0.677 -1.487 -3.640 HCE A1ILH 82 
A1ILH HBQ H39 H 0 1 N N N N N N -2.760 22.304 -9.140 -2.337 -0.862 -3.499 HBQ A1ILH 83 
A1ILH HBR H40 H 0 1 N N N N N N -4.686 23.709 -9.351 0.079  0.613  -2.678 HBR A1ILH 84 
A1ILH HCF H41 H 0 1 N N N N N N -5.311 23.158 -7.947 -0.778 0.876  -4.078 HCF A1ILH 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ILH CBQ NBR SING N N 1  
A1ILH CBQ CBP SING N N 2  
A1ILH CBO CBP SING N N 3  
A1ILH CBO CBG SING N N 4  
A1ILH OBJ CBH DOUB N N 5  
A1ILH CBG CBH SING N N 6  
A1ILH CBG NBF SING N N 7  
A1ILH CBH NBI SING N N 8  
A1ILH CAC NAD SING N N 9  
A1ILH CAC CAB SING N N 10 
A1ILH NBF CBD SING N N 11 
A1ILH NAD N   SING N N 12 
A1ILH NAD CBL SING N N 13 
A1ILH O   C   DOUB N N 14 
A1ILH N   CA  SING N N 15 
A1ILH OBN CBL DOUB N N 16 
A1ILH CAU CAT DOUB Y N 17 
A1ILH CAU CAO SING Y N 18 
A1ILH CBL CBK SING N N 19 
A1ILH CAB CB  SING N N 20 
A1ILH NBI CBK SING N N 21 
A1ILH CAT CAS SING Y N 22 
A1ILH CB  CA  SING N N 23 
A1ILH CAP CAO DOUB Y N 24 
A1ILH CAP CAQ SING Y N 25 
A1ILH CBK CBM SING N N 26 
A1ILH CAO CAN SING Y N 27 
A1ILH CAY OAZ SING N N 28 
A1ILH CAY CAX SING N N 29 
A1ILH CA  C   SING N N 30 
A1ILH C   NAI SING N N 31 
A1ILH OAZ CBA SING N N 32 
A1ILH CBD CAX SING N N 33 
A1ILH CBD OBE DOUB N N 34 
A1ILH CAQ CAK DOUB Y N 35 
A1ILH CAS CAV SING N N 36 
A1ILH CAS CAR DOUB Y N 37 
A1ILH CAW CAX SING N N 38 
A1ILH CAW CAV DOUB N E 39 
A1ILH CAN CAR SING Y N 40 
A1ILH CAN NAM DOUB Y N 41 
A1ILH CAX CBC SING N N 42 
A1ILH CAK NAM SING Y N 43 
A1ILH CAK CAJ SING N N 44 
A1ILH NAI CAJ SING N N 45 
A1ILH CAJ CAL SING N N 46 
A1ILH CBA OBB SING N N 47 
A1ILH CBC OBB SING N N 48 
A1ILH CAY HAY SING N N 49 
A1ILH CAY HB7 SING N N 50 
A1ILH CBA HBA SING N N 51 
A1ILH CBA HB8 SING N N 52 
A1ILH CBC HB9 SING N N 53 
A1ILH CBC HBC SING N N 54 
A1ILH NBF HBF SING N N 55 
A1ILH CAW HAW SING N N 56 
A1ILH CAV HAV SING N N 57 
A1ILH CAR HAR SING N N 58 
A1ILH CAT HAT SING N N 59 
A1ILH CAU HAU SING N N 60 
A1ILH CAP HAP SING N N 61 
A1ILH CAQ HAQ SING N N 62 
A1ILH CAJ HAJ SING N N 63 
A1ILH CAL HAL SING N N 64 
A1ILH CAL HB5 SING N N 65 
A1ILH CAL HB6 SING N N 66 
A1ILH NAI HAI SING N N 67 
A1ILH CA  HA  SING N N 68 
A1ILH N   H   SING N N 69 
A1ILH CB  HB2 SING N N 70 
A1ILH CB  HB1 SING N N 71 
A1ILH CAB HB3 SING N N 72 
A1ILH CAB HAB SING N N 73 
A1ILH CAC HB4 SING N N 74 
A1ILH CAC HAC SING N N 75 
A1ILH CBK HBK SING N N 76 
A1ILH CBM HCA SING N N 77 
A1ILH CBM HCB SING N N 78 
A1ILH CBM HBM SING N N 79 
A1ILH NBI HBI SING N N 80 
A1ILH CBG HBG SING N N 81 
A1ILH CBO HCC SING N N 82 
A1ILH CBO HBO SING N N 83 
A1ILH CBP HCD SING N N 84 
A1ILH CBP HBP SING N N 85 
A1ILH CBQ HCE SING N N 86 
A1ILH CBQ HBQ SING N N 87 
A1ILH NBR HBR SING N N 88 
A1ILH NBR HCF SING N N 89 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ILH InChI            InChI                1.06  "InChI=1S/C31H41N7O6/c1-19-23-10-9-22-8-7-21(15-26(22)35-23)11-12-31(16-43-18-44-17-31)30(42)36-24(5-3-13-32)27(39)34-20(2)29(41)38-14-4-6-25(37-38)28(40)33-19/h7-12,15,19-20,24-25,37H,3-6,13-14,16-18,32H2,1-2H3,(H,33,40)(H,34,39)(H,36,42)/b12-11+/t19-,20+,24+,25+/m1/s1" 
A1ILH InChIKey         InChI                1.06  PVLNMJCQMSIFFD-WHYDHWCJSA-N                                                                                                                                                                                                                                                     
A1ILH SMILES_CANONICAL CACTVS               3.385 "C[C@@H]1NC(=O)[C@H](CCCN)NC(=O)C2(COCOC2)\C=C\c3ccc4ccc(nc4c3)[C@@H](C)NC(=O)[C@@H]5CCC[N@@](N5)C1=O"                                                                                                                                                                          
A1ILH SMILES           CACTVS               3.385 "C[CH]1NC(=O)[CH](CCCN)NC(=O)C2(COCOC2)C=Cc3ccc4ccc(nc4c3)[CH](C)NC(=O)[CH]5CCC[N](N5)C1=O"                                                                                                                                                                                     
A1ILH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1c2ccc3ccc(cc3n2)/C=C/C4(COCOC4)C(=O)N[C@H](C(=O)N[C@H](C(=O)N5CCC[C@H](N5)C(=O)N1)C)CCCN"                                                                                                                                                                              
A1ILH SMILES           "OpenEye OEToolkits" 2.0.7 "CC1c2ccc3ccc(cc3n2)C=CC4(COCOC4)C(=O)NC(C(=O)NC(C(=O)N5CCCC(N5)C(=O)N1)C)CCCN"                                                                                                                                                                                                 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ILH "Create component" 2024-08-19 PDBE 
A1ILH "Initial release"  2024-11-06 RCSB 
# 
