data_9XH
# 
_chem_comp.id                                    9XH 
_chem_comp.name                                  "(2~{S})-2-azanyl-4-[4-[bis(4-fluorophenyl)methyl]piperazin-1-yl]-1-(1,3-dihydroisoindol-2-yl)butane-1,4-dione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H30 F2 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-07-26 
_chem_comp.pdbx_modified_date                    2018-02-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        504.571 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9XH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5OKW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9XH C1  C1  C 0 1 Y N N 137.671 -32.609 135.125 7.628  2.293  -0.845 C1  9XH 1  
9XH C2  C2  C 0 1 Y N N 138.719 -32.824 134.223 7.541  2.959  -2.052 C2  9XH 2  
9XH C3  C3  C 0 1 Y N N 139.570 -31.772 133.848 6.555  2.619  -2.959 C3  9XH 3  
9XH C4  C4  C 0 1 Y N N 139.405 -30.478 134.360 5.657  1.613  -2.657 C4  9XH 4  
9XH C5  C5  C 0 1 Y N N 138.373 -30.241 135.251 5.744  0.945  -1.448 C5  9XH 5  
9XH C6  C6  C 0 1 Y N N 137.497 -31.327 135.642 6.729  1.285  -0.542 C6  9XH 6  
9XH C7  C7  C 0 1 N N N 136.472 -30.802 136.603 6.596  0.405  0.675  C7  9XH 7  
9XH C12 C8  C 0 1 N N S 134.680 -28.183 136.836 3.816  -2.282 0.923  C12 9XH 8  
9XH N13 N1  N 0 1 N N N 133.606 -28.858 137.581 3.805  -3.506 1.735  N13 9XH 9  
9XH C15 C9  C 0 1 N N N 133.094 -26.323 136.181 1.348  -2.289 0.678  C15 9XH 10 
9XH C18 C10 C 0 1 N N N 131.254 -24.901 136.399 -1.064 -2.549 0.319  C18 9XH 11 
9XH C19 C11 C 0 1 N N N 131.020 -23.808 137.436 -1.900 -1.642 -0.589 C19 9XH 12 
9XH C21 C12 C 0 1 N N N 133.113 -22.856 137.069 -1.001 0.357  0.449  C21 9XH 13 
9XH C23 C13 C 0 1 N N N 131.318 -22.216 135.654 -3.161 0.425  -0.643 C23 9XH 14 
9XH C24 C14 C 0 1 Y N N 132.391 -21.381 135.070 -4.395 -0.382 -0.955 C24 9XH 15 
9XH C27 C15 C 0 1 Y N N 134.398 -19.803 133.977 -6.659 -1.863 -1.527 C27 9XH 16 
9XH C30 C16 C 0 1 Y N N 132.240 -20.000 135.015 -4.995 -0.275 -2.196 C30 9XH 17 
9XH C31 C17 C 0 1 Y N N 130.055 -21.446 135.648 -3.545 1.638  0.165  C31 9XH 18 
9XH C32 C18 C 0 1 Y N N 129.289 -21.382 134.489 -3.763 1.520  1.525  C32 9XH 19 
9XH C33 C19 C 0 1 Y N N 128.103 -20.658 134.477 -4.115 2.631  2.267  C33 9XH 20 
9XH C34 C20 C 0 1 Y N N 127.683 -19.995 135.625 -4.248 3.863  1.649  C34 9XH 21 
9XH C36 C21 C 0 1 Y N N 128.449 -20.058 136.783 -4.029 3.979  0.287  C36 9XH 22 
9XH C37 C22 C 0 1 Y N N 129.635 -20.782 136.795 -3.672 2.868  -0.453 C37 9XH 23 
9XH N8  N2  N 0 1 N N N 136.785 -29.375 136.720 5.458  -0.493 0.454  N8  9XH 24 
9XH C9  C23 C 0 1 N N N 137.964 -28.970 135.944 4.913  -0.172 -0.868 C9  9XH 25 
9XH C10 C24 C 0 1 N N N 136.028 -28.542 137.440 5.004  -1.437 1.302  C10 9XH 26 
9XH O11 O1  O 0 1 N N N 136.379 -28.100 138.526 5.552  -1.607 2.371  O11 9XH 27 
9XH C14 C25 C 0 1 N N N 134.405 -26.676 136.859 2.529  -1.493 1.172  C14 9XH 28 
9XH O16 O2  O 0 1 N N N 132.937 -26.460 134.976 1.519  -3.381 0.177  O16 9XH 29 
9XH N17 N3  N 0 1 N N N 132.686 -25.041 136.108 0.102  -1.789 0.794  N17 9XH 30 
9XH N20 N4  N 0 1 N N N 131.688 -22.574 137.030 -2.219 -0.398 0.126  N20 9XH 31 
9XH C22 C26 C 0 1 N N N 133.454 -23.808 135.933 -0.128 -0.468 1.400  C22 9XH 32 
9XH C25 C27 C 0 1 Y N N 133.547 -21.972 134.579 -4.922 -1.234 -0.002 C25 9XH 33 
9XH C26 C28 C 0 1 Y N N 134.550 -21.183 134.032 -6.054 -1.974 -0.287 C26 9XH 34 
9XH F28 F1  F 0 1 N N N 135.371 -19.039 133.448 -7.765 -2.587 -1.807 F28 9XH 35 
9XH C29 C29 C 0 1 Y N N 133.244 -19.211 134.468 -6.127 -1.014 -2.483 C29 9XH 36 
9XH F35 F2  F 0 1 N N N 126.535 -19.294 135.614 -4.593 4.950  2.373  F35 9XH 37 
9XH H1  H1  H 0 1 N N N 137.014 -33.416 135.413 8.402  2.555  -0.139 H1  9XH 38 
9XH H2  H2  H 0 1 N N N 138.875 -33.810 133.811 8.243  3.745  -2.287 H2  9XH 39 
9XH H3  H3  H 0 1 N N N 140.370 -31.965 133.149 6.486  3.139  -3.903 H3  9XH 40 
9XH H4  H4  H 0 1 N N N 140.071 -29.681 134.065 4.886  1.348  -3.366 H4  9XH 41 
9XH H5  H5  H 0 1 N N N 135.456 -30.947 136.207 7.507  -0.179 0.810  H5  9XH 42 
9XH H6  H6  H 0 1 N N N 134.663 -28.523 135.790 3.881  -2.548 -0.132 H6  9XH 43 
9XH H7  H7  H 0 1 N N N 133.767 -29.845 137.578 3.745  -3.286 2.719  H7  9XH 44 
9XH H8  H8  H 0 1 N N N 133.594 -28.525 138.524 3.054  -4.119 1.456  H8  9XH 45 
9XH H11 H11 H 0 1 N N N 130.721 -24.640 135.473 -1.665 -2.868 1.171  H11 9XH 46 
9XH H12 H12 H 0 1 N N N 130.869 -25.856 136.787 -0.732 -3.423 -0.242 H12 9XH 47 
9XH H13 H13 H 0 1 N N N 129.940 -23.622 137.530 -1.334 -1.408 -1.490 H13 9XH 48 
9XH H14 H14 H 0 1 N N N 131.422 -24.136 138.406 -2.824 -2.151 -0.862 H14 9XH 49 
9XH H15 H15 H 0 1 N N N 133.372 -23.321 138.032 -0.447 0.563  -0.467 H15 9XH 50 
9XH H16 H16 H 0 1 N N N 133.679 -21.920 136.950 -1.273 1.298  0.928  H16 9XH 51 
9XH H17 H17 H 0 1 N N N 131.195 -23.130 135.054 -2.690 0.743  -1.574 H17 9XH 52 
9XH H18 H18 H 0 1 N N N 131.341 -19.540 135.398 -4.579 0.387  -2.941 H18 9XH 53 
9XH H19 H19 H 0 1 N N N 129.616 -21.896 133.597 -3.659 0.559  2.007  H19 9XH 54 
9XH H20 H20 H 0 1 N N N 127.508 -20.610 133.577 -4.286 2.539  3.330  H20 9XH 55 
9XH H21 H21 H 0 1 N N N 128.122 -19.544 137.675 -4.133 4.939  -0.197 H21 9XH 56 
9XH H22 H22 H 0 1 N N N 130.230 -20.829 137.695 -3.498 2.959  -1.515 H22 9XH 57 
9XH H23 H23 H 0 1 N N N 138.765 -28.606 136.604 3.876  0.150  -0.773 H23 9XH 58 
9XH H24 H24 H 0 1 N N N 135.224 -26.158 136.338 2.419  -1.305 2.240  H24 9XH 59 
9XH H25 H25 H 0 1 N N N 134.365 -26.339 137.905 2.575  -0.544 0.638  H25 9XH 60 
9XH H29 H29 H 0 1 N N N 134.530 -24.036 135.952 0.826  0.036  1.552  H29 9XH 61 
9XH H30 H30 H 0 1 N N N 133.194 -23.344 134.970 -0.639 -0.588 2.355  H30 9XH 62 
9XH H31 H31 H 0 1 N N N 133.666 -23.045 134.622 -4.450 -1.320 0.965  H31 9XH 63 
9XH H32 H32 H 0 1 N N N 135.449 -21.642 133.649 -6.468 -2.636 0.459  H32 9XH 64 
9XH H33 H33 H 0 1 N N N 133.126 -18.138 134.425 -6.598 -0.927 -3.451 H33 9XH 65 
9XH H9  H9  H 0 1 N N N 137.706 -28.188 135.214 4.970  -1.048 -1.514 H9  9XH 66 
9XH H10 H10 H 0 1 N N N 136.560 -31.302 137.579 6.416  1.019  1.557  H10 9XH 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9XH F28 C27 SING N N 1  
9XH C3  C2  SING Y N 2  
9XH C3  C4  DOUB Y N 3  
9XH C27 C26 DOUB Y N 4  
9XH C27 C29 SING Y N 5  
9XH C26 C25 SING Y N 6  
9XH C2  C1  DOUB Y N 7  
9XH C4  C5  SING Y N 8  
9XH C29 C30 DOUB Y N 9  
9XH C33 C32 DOUB Y N 10 
9XH C33 C34 SING Y N 11 
9XH C32 C31 SING Y N 12 
9XH C25 C24 DOUB Y N 13 
9XH O16 C15 DOUB N N 14 
9XH C30 C24 SING Y N 15 
9XH C24 C23 SING N N 16 
9XH C1  C6  SING Y N 17 
9XH C5  C6  DOUB Y N 18 
9XH C5  C9  SING N N 19 
9XH F35 C34 SING N N 20 
9XH C34 C36 DOUB Y N 21 
9XH C6  C7  SING N N 22 
9XH C31 C23 SING N N 23 
9XH C31 C37 DOUB Y N 24 
9XH C23 N20 SING N N 25 
9XH C22 N17 SING N N 26 
9XH C22 C21 SING N N 27 
9XH C9  N8  SING N N 28 
9XH N17 C15 SING N N 29 
9XH N17 C18 SING N N 30 
9XH C15 C14 SING N N 31 
9XH C18 C19 SING N N 32 
9XH C7  N8  SING N N 33 
9XH N8  C10 SING N N 34 
9XH C36 C37 SING Y N 35 
9XH C12 C14 SING N N 36 
9XH C12 C10 SING N N 37 
9XH C12 N13 SING N N 38 
9XH N20 C21 SING N N 39 
9XH N20 C19 SING N N 40 
9XH C10 O11 DOUB N N 41 
9XH C1  H1  SING N N 42 
9XH C2  H2  SING N N 43 
9XH C3  H3  SING N N 44 
9XH C4  H4  SING N N 45 
9XH C7  H5  SING N N 46 
9XH C12 H6  SING N N 47 
9XH N13 H7  SING N N 48 
9XH N13 H8  SING N N 49 
9XH C18 H11 SING N N 50 
9XH C18 H12 SING N N 51 
9XH C19 H13 SING N N 52 
9XH C19 H14 SING N N 53 
9XH C21 H15 SING N N 54 
9XH C21 H16 SING N N 55 
9XH C23 H17 SING N N 56 
9XH C30 H18 SING N N 57 
9XH C32 H19 SING N N 58 
9XH C33 H20 SING N N 59 
9XH C36 H21 SING N N 60 
9XH C37 H22 SING N N 61 
9XH C9  H23 SING N N 62 
9XH C14 H24 SING N N 63 
9XH C14 H25 SING N N 64 
9XH C22 H29 SING N N 65 
9XH C22 H30 SING N N 66 
9XH C25 H31 SING N N 67 
9XH C26 H32 SING N N 68 
9XH C29 H33 SING N N 69 
9XH C9  H9  SING N N 70 
9XH C7  H10 SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9XH InChI            InChI                1.03  "InChI=1S/C29H30F2N4O2/c30-24-9-5-20(6-10-24)28(21-7-11-25(31)12-8-21)34-15-13-33(14-16-34)27(36)17-26(32)29(37)35-18-22-3-1-2-4-23(22)19-35/h1-12,26,28H,13-19,32H2/t26-/m0/s1" 
9XH InChIKey         InChI                1.03  ZKIQFLSGMMYCGS-SANMLTNESA-N                                                                                                                                                      
9XH SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CC(=O)N1CCN(CC1)C(c2ccc(F)cc2)c3ccc(F)cc3)C(=O)N4Cc5ccccc5C4"                                                                                                           
9XH SMILES           CACTVS               3.385 "N[CH](CC(=O)N1CCN(CC1)C(c2ccc(F)cc2)c3ccc(F)cc3)C(=O)N4Cc5ccccc5C4"                                                                                                             
9XH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)CN(C2)C(=O)[C@H](CC(=O)N3CCN(CC3)C(c4ccc(cc4)F)c5ccc(cc5)F)N"                                                                                                        
9XH SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)CN(C2)C(=O)C(CC(=O)N3CCN(CC3)C(c4ccc(cc4)F)c5ccc(cc5)F)N"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9XH "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-azanyl-4-[4-[bis(4-fluorophenyl)methyl]piperazin-1-yl]-1-(1,3-dihydroisoindol-2-yl)butane-1,4-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9XH "Create component" 2017-07-26 EBI  
9XH "Initial release"  2018-02-07 RCSB 
# 
