data_6KH
#

_chem_comp.id                                   6KH
_chem_comp.name                                 "heptyl 3-fluoro-alpha-D-mannopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C13 H25 F O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "3-Fluoro-Heptylmannoside; heptyl 3-fluoro-alpha-D-mannoside; heptyl 3-fluoro-D-mannoside; heptyl 3-fluoro-mannoside"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-05-27
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       280.333
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    6KH
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5L4W
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  6KH  3-Fluoro-Heptylmannoside             PDB  ?  
2  6KH  "heptyl 3-fluoro-alpha-D-mannoside"  PDB  ?  
3  6KH  "heptyl 3-fluoro-D-mannoside"        PDB  ?  
4  6KH  "heptyl 3-fluoro-mannoside"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6KH  C4   C4   C  0  1  N  N  R  29.570  11.132  75.596  -3.290   0.494  -0.689  C4   6KH   1  
6KH  C5   C5   C  0  1  N  N  R  30.186  12.124  74.556  -2.078   1.175  -0.048  C5   6KH   2  
6KH  C6   C6   C  0  1  N  N  N  31.543  11.627  74.054  -2.381   2.660   0.164  C6   6KH   3  
6KH  C3   C3   C  0  1  N  N  S  28.190  11.602  76.011  -3.002  -1.003  -0.844  C3   6KH   4  
6KH  CAR  CAR  C  0  1  N  N  N  31.303  22.094  73.412   8.253   0.316  -0.241  CAR  6KH   5  
6KH  CAQ  CAQ  C  0  1  N  N  N  31.077  20.888  74.280   6.949  -0.197  -0.855  CAQ  6KH   6  
6KH  CAP  CAP  C  0  1  N  N  N  30.432  19.779  73.435   5.797   0.037   0.125  CAP  6KH   7  
6KH  CAO  CAO  C  0  1  N  N  N  29.925  18.667  74.345   4.493  -0.476  -0.489  CAO  6KH   8  
6KH  CAN  CAN  C  0  1  N  N  N  29.424  17.531  73.476   3.342  -0.242   0.491  CAN  6KH   9  
6KH  CAM  CAM  C  0  1  N  N  N  28.727  16.457  74.336   2.037  -0.755  -0.122  CAM  6KH  10  
6KH  CAL  CAL  C  0  1  N  N  N  28.734  15.108  73.611   0.886  -0.521   0.858  CAL  6KH  11  
6KH  O1   O1   O  0  1  N  N  N  28.025  14.132  74.398  -0.332  -1.000   0.285  O1   6KH  12  
6KH  C1   C1   C  0  1  N  N  S  28.017  12.826  73.805  -1.476  -0.829   1.123  C1   6KH  13  
6KH  O5   O5   O  0  1  N  N  N  29.316  12.276  73.427  -1.799   0.560   1.211  O5   6KH  14  
6KH  O6   O6   O  0  1  N  N  N  31.370  10.413  73.330  -1.211   3.319   0.654  O6   6KH  15  
6KH  O4   O4   O  0  1  N  N  N  30.391  11.040  76.752  -3.536   1.068  -1.975  O4   6KH  16  
6KH  F3   F3   F  0  1  N  N  N  27.607  10.611  76.803  -4.131  -1.645  -1.363  F3   6KH  17  
6KH  C2   C2   C  0  1  N  N  R  27.323  11.841  74.770  -2.664  -1.591   0.529  C2   6KH  18  
6KH  O2   O2   O  0  1  N  N  N  27.112  10.587  74.115  -3.794  -1.464   1.395  O2   6KH  19  
6KH  H4   H1   H  0  1  N  N  N  29.479  10.146  75.118  -4.165   0.633  -0.055  H4   6KH  20  
6KH  H5   H2   H  0  1  N  N  N  30.330  13.095  75.052  -1.214   1.071  -0.703  H5   6KH  21  
6KH  H61  H3   H  0  1  N  N  N  32.208  11.450  74.912  -2.681   3.109  -0.783  H61  6KH  22  
6KH  H62  H4   H  0  1  N  N  N  31.990  12.386  73.395  -3.188   2.766   0.889  H62  6KH  23  
6KH  H3   H5   H  0  1  N  N  N  28.283  12.545  76.569  -2.159  -1.144  -1.520  H3   6KH  24  
6KH  H6   H6   H  0  1  N  N  N  31.765  22.894  74.009   8.452  -0.219   0.688  H6   6KH  25  
6KH  H7   H7   H  0  1  N  N  N  31.970  21.826  72.579   9.073   0.149  -0.940  H7   6KH  26  
6KH  H8   H8   H  0  1  N  N  N  30.340  22.444  73.013   8.162   1.382  -0.035  H8   6KH  27  
6KH  H9   H9   H  0  1  N  N  N  32.039  20.535  74.679   6.749   0.337  -1.784  H9   6KH  28  
6KH  H10  H10  H  0  1  N  N  N  30.409  21.153  75.113   7.039  -1.264  -1.062  H10  6KH  29  
6KH  H11  H11  H  0  1  N  N  N  29.589  20.197  72.865   5.996  -0.498   1.054  H11  6KH  30  
6KH  H12  H12  H  0  1  N  N  N  31.178  19.369  72.739   5.707   1.103   0.332  H12  6KH  31  
6KH  H13  H13  H  0  1  N  N  N  30.743  18.310  74.988   4.293   0.058  -1.418  H13  6KH  32  
6KH  H14  H14  H  0  1  N  N  N  29.104  19.045  74.972   4.583  -1.543  -0.695  H14  6KH  33  
6KH  H15  H15  H  0  1  N  N  N  30.276  17.076  72.949   3.541  -0.777   1.420  H15  6KH  34  
6KH  H16  H16  H  0  1  N  N  N  28.708  17.927  72.741   3.251   0.824   0.698  H16  6KH  35  
6KH  H17  H17  H  0  1  N  N  N  29.259  16.357  75.293   1.838  -0.221  -1.051  H17  6KH  36  
6KH  H18  H18  H  0  1  N  N  N  27.687  16.762  74.525   2.128  -1.822  -0.329  H18  6KH  37  
6KH  H19  H19  H  0  1  N  N  N  28.243  15.216  72.633   1.085  -1.056   1.787  H19  6KH  38  
6KH  H20  H20  H  0  1  N  N  N  29.773  14.776  73.465   0.795   0.545   1.064  H20  6KH  39  
6KH  H1   H21  H  0  1  N  N  N  27.396  12.869  72.898  -1.258  -1.215   2.119  H1   6KH  40  
6KH  HO6  H22  H  0  1  N  Y  N  32.214  10.106  73.019  -1.330   4.265   0.812  HO6  6KH  41  
6KH  HO4  H23  H  0  1  N  Y  N  30.001  10.434  77.371  -4.289   0.680  -2.441  HO4  6KH  42  
6KH  H2   H24  H  0  1  N  N  N  26.362  12.273  75.085  -2.404  -2.644   0.421  H2   6KH  43  
6KH  HO2  H25  H  0  1  N  Y  N  26.685   9.985  74.713  -3.649  -1.812   2.285  HO2  6KH  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6KH  O6   C6   SING  N  N   1  
6KH  CAR  CAQ  SING  N  N   2  
6KH  O5   C1   SING  N  N   3  
6KH  O5   C5   SING  N  N   4  
6KH  CAP  CAQ  SING  N  N   5  
6KH  CAP  CAO  SING  N  N   6  
6KH  CAN  CAM  SING  N  N   7  
6KH  CAN  CAO  SING  N  N   8  
6KH  CAL  CAM  SING  N  N   9  
6KH  CAL  O1   SING  N  N  10  
6KH  C1   O1   SING  N  N  11  
6KH  C1   C2   SING  N  N  12  
6KH  C6   C5   SING  N  N  13  
6KH  O2   C2   SING  N  N  14  
6KH  C5   C4   SING  N  N  15  
6KH  C2   C3   SING  N  N  16  
6KH  C4   C3   SING  N  N  17  
6KH  C4   O4   SING  N  N  18  
6KH  C3   F3   SING  N  N  19  
6KH  C4   H4   SING  N  N  20  
6KH  C5   H5   SING  N  N  21  
6KH  C6   H61  SING  N  N  22  
6KH  C6   H62  SING  N  N  23  
6KH  C3   H3   SING  N  N  24  
6KH  CAR  H6   SING  N  N  25  
6KH  CAR  H7   SING  N  N  26  
6KH  CAR  H8   SING  N  N  27  
6KH  CAQ  H9   SING  N  N  28  
6KH  CAQ  H10  SING  N  N  29  
6KH  CAP  H11  SING  N  N  30  
6KH  CAP  H12  SING  N  N  31  
6KH  CAO  H13  SING  N  N  32  
6KH  CAO  H14  SING  N  N  33  
6KH  CAN  H15  SING  N  N  34  
6KH  CAN  H16  SING  N  N  35  
6KH  CAM  H17  SING  N  N  36  
6KH  CAM  H18  SING  N  N  37  
6KH  CAL  H19  SING  N  N  38  
6KH  CAL  H20  SING  N  N  39  
6KH  C1   H1   SING  N  N  40  
6KH  O6   HO6  SING  N  N  41  
6KH  O4   HO4  SING  N  N  42  
6KH  C2   H2   SING  N  N  43  
6KH  O2   HO2  SING  N  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6KH  InChI             InChI                 1.03   "InChI=1S/C13H25FO5/c1-2-3-4-5-6-7-18-13-12(17)10(14)11(16)9(8-15)19-13/h9-13,15-17H,2-8H2,1H3/t9-,10+,11-,12+,13+/m1/s1"  
6KH  InChIKey          InChI                 1.03   ZEXHYSKAVKHNNT-FHUSYTEZSA-N  
6KH  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCCO[C@H]1O[C@H](CO)[C@@H](O)[C@H](F)[C@@H]1O"  
6KH  SMILES            CACTVS                3.385  "CCCCCCCO[CH]1O[CH](CO)[CH](O)[CH](F)[CH]1O"  
6KH  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.5  "CCCCCCCO[C@@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)F)O"  
6KH  SMILES            "OpenEye OEToolkits"  2.0.5  "CCCCCCCOC1C(C(C(C(O1)CO)O)F)O"  
#
_pdbx_chem_comp_identifier.comp_id          6KH
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.5
_pdbx_chem_comp_identifier.identifier       "(2~{S},3~{R},4~{S},5~{R},6~{R})-4-fluoranyl-2-heptoxy-6-(hydroxymethyl)oxane-3,5-diol"
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
6KH  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
6KH  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
6KH  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
6KH  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6KH  "Create component"          2016-05-27  EBI   
6KH  "Other modification"        2016-06-02  RCSB  
6KH  "Initial release"           2017-06-21  RCSB  
6KH  "Other modification"        2020-07-03  RCSB  
6KH  "Modify name"               2020-07-17  RCSB  
6KH  "Modify synonyms"           2020-07-17  RCSB  
6KH  "Modify internal type"      2020-07-17  RCSB  
6KH  "Modify linking type"       2020-07-17  RCSB  
6KH  "Modify atom id"            2020-07-17  RCSB  
6KH  "Modify component atom id"  2020-07-17  RCSB  
6KH  "Modify leaving atom flag"  2020-07-17  RCSB  
##
