data_58H
# 
_chem_comp.id                                    58H 
_chem_comp.name                                  "methyl (4R)-4-(2-chloro-4-fluorophenyl)-6-{[4-(3-hydroxypenta-1,4-diyn-3-yl)piperidin-1-yl]methyl}-2-(pyridin-2-yl)-1,4-dihydropyrimidine-5-carboxylate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H26 Cl F N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-08-20 
_chem_comp.pdbx_modified_date                    2016-02-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        520.982 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     58H 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5D7Y 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
58H C14 C1  C  0 1 N N N 188.001 -3.969  235.821 5.729  -1.119 2.201  C14 58H 1  
58H C11 C2  C  0 1 N N N 188.660 -6.046  237.947 3.163  -1.006 0.846  C11 58H 2  
58H CL3 CL1 CL 0 0 N N N 191.550 -11.275 239.968 -4.569 2.345  0.199  CL3 58H 3  
58H C01 C3  C  0 1 N N N 186.841 -12.839 238.261 -0.144 3.382  -3.516 C01 58H 4  
58H O02 O1  O  0 1 N N N 187.950 -11.969 238.017 -0.884 2.484  -2.686 O02 58H 5  
58H C03 C4  C  0 1 N N N 188.739 -12.409 237.010 -0.311 1.294  -2.408 C03 58H 6  
58H C04 C5  C  0 1 N N N 189.989 -11.636 236.965 -0.987 0.357  -1.593 C04 58H 7  
58H C05 C6  C  0 1 N N N 190.090 -10.295 236.844 -0.469 -0.875 -1.428 C05 58H 8  
58H C06 C7  C  0 1 N N N 188.911 -9.344  236.735 0.829  -1.247 -2.099 C06 58H 9  
58H N07 N1  N  0 1 N N N 188.610 -8.565  238.010 1.955  -0.790 -1.274 N07 58H 10 
58H C08 C8  C  0 1 N N N 187.132 -8.290  238.208 3.207  -0.796 -2.043 C08 58H 11 
58H C09 C9  C  0 1 N N N 186.614 -7.290  237.188 4.326  -0.180 -1.201 C09 58H 12 
58H C10 C10 C  0 1 N N N 187.644 -6.210  236.796 4.493  -0.988 0.089  C10 58H 13 
58H C12 C11 C  0 1 N N N 189.441 -7.329  238.232 2.077  -1.599 -0.055 C12 58H 14 
58H C13 C12 C  0 1 N N N 186.972 -4.867  236.383 5.570  -0.341 0.962  C13 58H 15 
58H C15 C13 C  0 1 N N N 188.802 -3.280  235.251 5.857  -1.739 3.190  C15 58H 16 
58H O16 O2  O  0 1 N N N 186.429 -4.257  237.551 5.181  0.996  1.285  O16 58H 17 
58H C17 C14 C  0 1 N N N 185.911 -5.086  235.380 6.847  -0.317 0.230  C17 58H 18 
58H C18 C15 C  0 1 N N N 185.075 -5.254  234.534 7.865  -0.298 -0.354 C18 58H 19 
58H N19 N2  N  0 1 N N N 191.373 -9.782  236.781 -1.127 -1.788 -0.647 N19 58H 20 
58H C20 C16 C  0 1 N N N 192.503 -10.556 236.933 -2.455 -1.584 -0.331 C20 58H 21 
58H C21 C17 C  0 1 Y N N 193.808 -9.860  237.095 -3.268 -2.722 0.160  C21 58H 22 
58H C22 C18 C  0 1 Y N N 194.841 -10.513 237.762 -4.609 -2.524 0.481  C22 58H 23 
58H C23 C19 C  0 1 Y N N 196.012 -9.818  237.973 -5.356 -3.598 0.939  C23 58H 24 
58H C24 C20 C  0 1 Y N N 196.108 -8.523  237.489 -4.736 -4.832 1.060  C24 58H 25 
58H C25 C21 C  0 1 Y N N 195.022 -7.947  236.845 -3.399 -4.956 0.722  C25 58H 26 
58H N26 N3  N  0 1 Y N N 193.844 -8.578  236.648 -2.714 -3.921 0.285  N26 58H 27 
58H N27 N4  N  0 1 N N N 192.499 -11.843 237.009 -3.004 -0.420 -0.455 N27 58H 28 
58H C28 C22 C  0 1 N N R 191.203 -12.533 237.047 -2.269 0.753  -0.918 C28 58H 29 
58H C29 C23 C  0 1 Y N N 191.152 -13.422 238.290 -1.955 1.641  0.258  C29 58H 30 
58H C30 C24 C  0 1 Y N N 191.268 -12.934 239.608 -2.954 2.407  0.834  C30 58H 31 
58H C32 C25 C  0 1 Y N N 191.125 -13.784 240.701 -2.665 3.222  1.913  C32 58H 32 
58H C33 C26 C  0 1 Y N N 190.872 -15.122 240.481 -1.377 3.271  2.418  C33 58H 33 
58H C35 C27 C  0 1 Y N N 190.807 -15.643 239.199 -0.379 2.504  1.842  C35 58H 34 
58H C36 C28 C  0 1 Y N N 190.937 -14.799 238.104 -0.670 1.686  0.766  C36 58H 35 
58H O37 O3  O  0 1 N N N 188.516 -13.351 236.267 0.788  1.028  -2.859 O37 58H 36 
58H F34 F1  F  0 1 N N N 190.682 -15.932 241.524 -1.094 4.067  3.472  F34 58H 37 
58H H1  H1  H  0 1 N N N 189.373 -5.253  237.677 3.263  -1.616 1.744  H1  58H 38 
58H H2  H2  H  0 1 N N N 188.116 -5.756  238.858 2.888  0.011  1.126  H2  58H 39 
58H H3  H3  H  0 1 N N N 186.234 -12.437 239.086 -0.717 4.298  -3.660 H3  58H 40 
58H H4  H4  H  0 1 N N N 186.224 -12.910 237.353 0.806  3.619  -3.037 H4  58H 41 
58H H5  H5  H  0 1 N N N 187.212 -13.838 238.532 0.042  2.914  -4.482 H5  58H 42 
58H H6  H6  H  0 1 N N N 189.124 -8.622  235.933 0.880  -2.330 -2.216 H6  58H 43 
58H H7  H7  H  0 1 N N N 188.019 -9.931  236.472 0.880  -0.773 -3.079 H7  58H 44 
58H H9  H9  H  0 1 N N N 186.975 -7.885  239.218 3.469  -1.822 -2.301 H9  58H 45 
58H H10 H10 H  0 1 N N N 186.575 -9.232  238.101 3.075  -0.215 -2.955 H10 58H 46 
58H H11 H11 H  0 1 N N N 185.730 -6.789  237.611 5.258  -0.199 -1.766 H11 58H 47 
58H H12 H12 H  0 1 N N N 186.325 -7.839  236.280 4.071  0.851  -0.955 H12 58H 48 
58H H13 H13 H  0 1 N N N 188.195 -6.582  235.920 4.787  -2.009 -0.157 H13 58H 49 
58H H14 H14 H  0 1 N N N 190.315 -7.366  237.566 2.344  -2.621 -0.322 H14 58H 50 
58H H15 H15 H  0 1 N N N 189.778 -7.313  239.279 1.125  -1.600 0.477  H15 58H 51 
58H H16 H16 H  0 1 N N N 189.509 -2.672  234.748 5.971  -2.294 4.074  H16 58H 52 
58H H17 H17 H  0 1 N N N 187.120 -4.121  238.188 5.058  1.567  0.514  H17 58H 53 
58H H18 H18 H  0 1 N N N 184.337 -5.402  233.787 8.776  -0.281 -0.877 H18 58H 54 
58H H19 H19 H  0 1 N N N 194.728 -11.532 238.103 -5.060 -1.549 0.375  H19 58H 55 
58H H20 H20 H  0 1 N N N 196.836 -10.272 238.503 -6.398 -3.475 1.196  H20 58H 56 
58H H21 H21 H  0 1 N N N 197.024 -7.964  237.612 -5.291 -5.688 1.414  H21 58H 57 
58H H22 H22 H  0 1 N N N 195.125 -6.936  236.480 -2.913 -5.916 0.816  H22 58H 58 
58H H23 H23 H  0 1 N N N 191.211 -13.401 241.707 -3.445 3.820  2.362  H23 58H 59 
58H H24 H24 H  0 1 N N N 190.656 -16.702 239.052 0.626  2.542  2.235  H24 58H 60 
58H H25 H25 H  0 1 N N N 190.873 -15.202 237.104 0.108  1.085  0.319  H25 58H 61 
58H H8  H8  H  0 1 N N N 191.486 -8.802  236.617 -0.663 -2.574 -0.319 H8  58H 62 
58H H26 H26 H  0 1 N N N 191.163 -13.205 236.177 -2.889 1.305  -1.625 H26 58H 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
58H C18 C17 TRIP N N 1  
58H C15 C14 TRIP N N 2  
58H C17 C13 SING N N 3  
58H C14 C13 SING N N 4  
58H O37 C03 DOUB N N 5  
58H C13 C10 SING N N 6  
58H C13 O16 SING N N 7  
58H N26 C25 DOUB Y N 8  
58H N26 C21 SING Y N 9  
58H C06 C05 SING N N 10 
58H C06 N07 SING N N 11 
58H N19 C05 SING N N 12 
58H N19 C20 SING N N 13 
58H C10 C09 SING N N 14 
58H C10 C11 SING N N 15 
58H C05 C04 DOUB N N 16 
58H C25 C24 SING Y N 17 
58H C20 N27 DOUB N N 18 
58H C20 C21 SING N N 19 
58H C04 C03 SING N N 20 
58H C04 C28 SING N N 21 
58H N27 C28 SING N N 22 
58H C03 O02 SING N N 23 
58H C28 C29 SING N N 24 
58H C21 C22 DOUB Y N 25 
58H C09 C08 SING N N 26 
58H C24 C23 DOUB Y N 27 
58H C22 C23 SING Y N 28 
58H C11 C12 SING N N 29 
58H N07 C08 SING N N 30 
58H N07 C12 SING N N 31 
58H O02 C01 SING N N 32 
58H C36 C29 DOUB Y N 33 
58H C36 C35 SING Y N 34 
58H C29 C30 SING Y N 35 
58H C35 C33 DOUB Y N 36 
58H C30 CL3 SING N N 37 
58H C30 C32 DOUB Y N 38 
58H C33 C32 SING Y N 39 
58H C33 F34 SING N N 40 
58H C11 H1  SING N N 41 
58H C11 H2  SING N N 42 
58H C01 H3  SING N N 43 
58H C01 H4  SING N N 44 
58H C01 H5  SING N N 45 
58H C06 H6  SING N N 46 
58H C06 H7  SING N N 47 
58H C08 H9  SING N N 48 
58H C08 H10 SING N N 49 
58H C09 H11 SING N N 50 
58H C09 H12 SING N N 51 
58H C10 H13 SING N N 52 
58H C12 H14 SING N N 53 
58H C12 H15 SING N N 54 
58H C15 H16 SING N N 55 
58H O16 H17 SING N N 56 
58H C18 H18 SING N N 57 
58H C22 H19 SING N N 58 
58H C23 H20 SING N N 59 
58H C24 H21 SING N N 60 
58H C25 H22 SING N N 61 
58H C32 H23 SING N N 62 
58H C35 H24 SING N N 63 
58H C36 H25 SING N N 64 
58H N19 H8  SING N N 65 
58H C28 H26 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
58H SMILES           ACDLabs              12.01 "C(C(C4CCN(CC1=C(C(OC)=O)C(N=C(N1)c2ccccn2)c3c(Cl)cc(F)cc3)CC4)(O)C#C)#C"                                                                                                                            
58H InChI            InChI                1.03  "InChI=1S/C28H26ClFN4O3/c1-4-28(36,5-2)18-11-14-34(15-12-18)17-23-24(27(35)37-3)25(20-10-9-19(30)16-21(20)29)33-26(32-23)22-8-6-7-13-31-22/h1-2,6-10,13,16,18,25,36H,11-12,14-15,17H2,3H3,(H,32,33)" 
58H InChIKey         InChI                1.03  GKZRJYVILONFJM-UHFFFAOYSA-N                                                                                                                                                                          
58H SMILES_CANONICAL CACTVS               3.385 "COC(=O)C1=C(CN2CC[C@@H](CC2)C(O)(C#C)C#C)NC(=N[C@H]1c3ccc(F)cc3Cl)c4ccccn4"                                                                                                                         
58H SMILES           CACTVS               3.385 "COC(=O)C1=C(CN2CC[CH](CC2)C(O)(C#C)C#C)NC(=N[CH]1c3ccc(F)cc3Cl)c4ccccn4"                                                                                                                            
58H SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COC(=O)C1=C(NC(=NC1c2ccc(cc2Cl)F)c3ccccn3)CN4CCC(CC4)C(C#C)(C#C)O"                                                                                                                                  
58H SMILES           "OpenEye OEToolkits" 1.9.2 "COC(=O)C1=C(NC(=NC1c2ccc(cc2Cl)F)c3ccccn3)CN4CCC(CC4)C(C#C)(C#C)O"                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
58H "SYSTEMATIC NAME" ACDLabs              12.01 "methyl (4R)-4-(2-chloro-4-fluorophenyl)-6-{[4-(3-hydroxypenta-1,4-diyn-3-yl)piperidin-1-yl]methyl}-2-(pyridin-2-yl)-1,4-dihydropyrimidine-5-carboxylate"  
58H "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "methyl 4-(2-chloranyl-4-fluoranyl-phenyl)-6-[[4-(3-oxidanylpenta-1,4-diyn-3-yl)piperidin-1-yl]methyl]-2-pyridin-2-yl-1,4-dihydropyrimidine-5-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
58H "Create component" 2015-08-20 RCSB 
58H "Initial release"  2016-02-17 RCSB 
# 
