data_3VH
#

_chem_comp.id                                   3VH
_chem_comp.name                                 
;
(3aR,5aS,8S,10aS)-1-[(3S,6R,8aS)-1'-[(2S)-2-acetamido-3-(2-chlorophenyl)propanoyl]-5-oxidanylidene-spiro[1,2,3,8a-tetrahydroindolizine-6,2'-pyrrolidine]-3-yl]carbonyl-10-oxidanylidene-2,3,3a,5a,8,10a-hexahydrodipyrrolo[3,2-b:3',1'-f]azepine-8-carboxylic acid
;

_chem_comp.type                                 peptide-like
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C35 H38 Cl N5 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-11-25
_chem_comp.pdbx_modified_date                   2014-10-10
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       676.159
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    3VH
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4MY6
_chem_comp.pdbx_subcomponent_list               "ACT 2L5 2L6 2L9"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3VH  C32  C32  C   0  1  N  N  N  20.995   -8.669  -17.367   5.185  -1.541  -1.997  C    ACT   1  
3VH  O5   O5   O   0  1  N  N  N  21.149   -9.741  -16.770   4.071  -1.199  -2.336  O    ACT   2  
3VH  C33  C33  C   0  1  N  N  N  20.727   -8.665  -18.846   6.015  -2.411  -2.905  CH3  ACT   3  
3VH  CL   CL   CL  0  0  N  N  N  24.064   -9.555  -13.965   5.618   2.608   1.666  CL   2L5   4  
3VH  C15  C15  C   0  1  Y  N  N  24.472   -8.989  -15.539   6.368   2.555   0.101  C15  2L5   5  
3VH  C19  C19  C   0  1  Y  N  N  25.381   -9.758  -16.306   7.531   3.266  -0.135  C19  2L5   6  
3VH  C18  C18  C   0  1  Y  N  N  25.712   -9.281  -17.566   8.127   3.223  -1.381  C18  2L5   7  
3VH  C17  C17  C   0  1  Y  N  N  25.197   -8.091  -18.078   7.561   2.469  -2.392  C17  2L5   8  
3VH  C16  C16  C   0  1  Y  N  N  24.297   -7.318  -17.296   6.399   1.758  -2.158  C16  2L5   9  
3VH  C14  C14  C   0  1  Y  N  N  23.960   -7.750  -16.006   5.805   1.796  -0.911  C14  2L5  10  
3VH  C13  C13  C   0  1  N  N  N  22.981   -6.954  -15.166   4.538   1.020  -0.655  C13  2L5  11  
3VH  C12  C12  C   0  1  N  N  S  21.523   -7.453  -15.296   4.876  -0.285   0.068  C12  2L5  12  
3VH  N4   N4   N   0  1  N  N  N  21.070   -7.465  -16.720   5.681  -1.136  -0.811  N4   2L5  13  
3VH  C11  C11  C   0  1  N  N  N  20.640   -6.513  -14.561   3.602  -1.002   0.432  C11  2L5  14  
3VH  O4   O4   O   0  1  N  N  N  20.292   -5.471  -15.064   3.207  -1.922  -0.252  O4   2L5  15  
3VH  N5   N5   N   0  1  N  N  N  20.274   -6.810  -13.272   2.901  -0.621   1.519  N5   2L6  16  
3VH  C30  C30  C   0  1  N  N  N  20.616   -8.060  -12.567   3.264   0.477   2.434  C30  2L6  17  
3VH  C29  C29  C   0  1  N  N  N  20.300   -7.725  -11.104   2.565   0.126   3.771  C29  2L6  18  
3VH  C34  C34  C   0  1  N  N  N  19.175   -6.716  -11.189   1.229  -0.486   3.272  C34  2L6  19  
3VH  C35  C35  C   0  1  N  N  R  19.497   -5.861  -12.431   1.645  -1.225   1.984  C35  2L6  20  
3VH  C31  C31  C   0  1  N  N  N  20.374   -4.699  -12.072   0.577  -1.041   0.937  C31  2L6  21  
3VH  O3   O3   O   0  1  N  N  N  21.616   -4.711  -12.036   0.493  -0.000   0.321  O3   2L6  22  
3VH  N3   N3   N   0  1  N  N  N  19.734   -3.542  -11.777  -0.282  -2.049   0.695  N3   2L6  23  
3VH  C26  C26  C   0  1  N  N  N  18.234   -5.431  -13.155   1.859  -2.678   2.289  C26  2L6  24  
3VH  C28  C28  C   0  1  N  N  N  17.638   -4.243  -12.903   0.949  -3.591   2.100  C28  2L6  25  
3VH  C27  C27  C   0  1  N  N  S  18.285   -3.306  -11.912  -0.404  -3.246   1.551  C27  2L6  26  
3VH  C24  C24  C   0  1  N  N  N  18.155   -1.821  -12.247  -0.902  -4.353   0.594  C24  2L6  27  
3VH  C9   C9   C   0  1  N  N  N  19.378   -1.216  -11.535  -1.908  -3.555  -0.283  C9   2L6  28  
3VH  C10  C10  C   0  1  N  N  S  20.460   -2.303  -11.482  -1.217  -2.179  -0.427  C10  2L6  29  
3VH  C20  C20  C   0  1  N  N  N  21.089   -2.376  -10.114  -2.246  -1.079  -0.367  C20  2L6  30  
3VH  O6   O6   O   0  1  N  N  N  20.727   -3.225   -9.294  -2.207  -0.260   0.526  O6   2L6  31  
3VH  N2   N2   N   0  1  N  N  N  22.092   -1.486   -9.807  -3.209  -1.006  -1.307  N2   2L9  32  
3VH  C22  C22  C   0  1  N  N  N  22.716   -0.527  -10.789  -3.391  -1.930  -2.449  C22  2L9  33  
3VH  C23  C23  C   0  1  N  N  N  24.105   -0.248  -10.250  -4.670  -1.480  -3.203  C23  2L9  34  
3VH  C8   C8   C   0  1  N  N  R  23.819   -0.306   -8.745  -5.413  -0.677  -2.122  C8   2L9  35  
3VH  C21  C21  C   0  1  N  N  S  22.840   -1.482   -8.556  -4.269  -0.004  -1.382  C21  2L9  36  
3VH  C25  C25  C   0  1  N  N  N  21.974   -1.259   -7.343  -4.697   0.604  -0.101  C25  2L9  37  
3VH  O7   O7   O   0  1  N  N  N  20.750   -0.978   -7.384  -4.263   0.200   0.957  O7   2L9  38  
3VH  C7   C7   C   0  1  N  N  N  25.010   -0.509   -7.873  -6.485   0.203  -2.583  C7   2L9  39  
3VH  C6   C6   C   0  1  N  N  N  25.073   -1.199   -6.711  -6.752   1.424  -2.293  C6   2L9  40  
3VH  C5   C5   C   0  1  N  N  S  23.996   -1.944   -6.000  -5.959   2.325  -1.393  C5   2L9  41  
3VH  C4   C4   C   0  1  N  N  N  24.305   -1.991   -4.497  -6.826   3.487  -0.966  C4   2L9  42  
3VH  C3   C3   C   0  1  N  N  N  23.031   -1.620   -3.772  -7.011   3.464   0.324  C3   2L9  43  
3VH  C2   C2   C   0  1  N  N  S  21.963   -1.271   -4.816  -6.286   2.290   0.932  C2   2L9  44  
3VH  N1   N1   N   0  1  N  N  N  22.611   -1.386   -6.138  -5.578   1.617  -0.144  N1   2L9  45  
3VH  C1   C1   C   0  1  N  N  N  21.524    0.130   -4.554  -7.276   1.337   1.550  C1   2L9  46  
3VH  O2   O2   O   0  1  N  N  N  20.506    0.310   -3.807  -8.064   1.747   2.557  O2   2L9  47  
3VH  O1   O1   O   0  1  N  N  N  22.198    1.057   -5.085  -7.360   0.204   1.140  O1   2L9  48  
3VH  H9   H9   H   0  1  N  N  N  20.704   -9.700  -19.218   5.453  -2.630  -3.813  H1   ACT  49  
3VH  H10  H10  H   0  1  N  N  N  19.757   -8.184  -19.042   6.936  -1.890  -3.165  H2   ACT  50  
3VH  H11  H11  H   0  1  N  N  N  21.523   -8.108  -19.361   6.256  -3.343  -2.393  H3   ACT  51  
3VH  H1   H1   H   0  1  N  N  N  25.799  -10.678  -15.926   7.972   3.855   0.655  H1   2L5  52  
3VH  H2   H2   H   0  1  N  N  N  26.396   -9.854  -18.174   9.035   3.778  -1.565  H2   2L5  53  
3VH  H3   H3   H   0  1  N  N  N  25.481   -7.758  -19.065   8.028   2.436  -3.366  H3   2L5  54  
3VH  H4   H4   H   0  1  N  N  N  23.876   -6.406  -17.692   5.957   1.170  -2.949  H4   2L5  55  
3VH  H5   H5   H   0  1  N  N  N  23.284   -7.029  -14.111   3.867   1.615  -0.036  H5   2L5  56  
3VH  H6   H6   H   0  1  N  N  N  23.021   -5.902  -15.485   4.053   0.794  -1.605  H6   2L5  57  
3VH  H7   H7   H   0  1  N  N  N  21.444   -8.463  -14.867   5.440  -0.063   0.974  H7   2L5  58  
3VH  H8   H8   H   0  1  N  N  N  20.828   -6.615  -17.188   6.572  -1.409  -0.540  H8   2L5  59  
3VH  H12  H12  H   0  1  N  N  N  19.998   -8.897  -12.924   4.345   0.515   2.570  H12  2L6  60  
3VH  H13  H13  H   0  1  N  N  N  21.680   -8.308  -12.695   2.895   1.428   2.051  H13  2L6  61  
3VH  H14  H14  H   0  1  N  N  N  19.977   -8.624  -10.559   3.143  -0.606   4.335  H14  2L6  62  
3VH  H15  H15  H   0  1  N  N  N  21.178   -7.289  -10.605   2.386   1.022   4.365  H15  2L6  63  
3VH  H16  H16  H   0  1  N  N  N  19.149   -6.090  -10.285   0.826  -1.184   4.007  H16  2L6  64  
3VH  H17  H17  H   0  1  N  N  N  18.208   -7.225  -11.311   0.505   0.297   3.049  H17  2L6  65  
3VH  H18  H18  H   0  1  N  N  N  17.800   -6.091  -13.891   2.816  -2.983   2.686  H18  2L6  66  
3VH  H19  H19  H   0  1  N  N  N  16.719   -3.971  -13.400   1.174  -4.619   2.343  H19  2L6  67  
3VH  H20  H20  H   0  1  N  N  N  17.814   -3.471  -10.932  -1.115  -3.073   2.359  H20  2L6  68  
3VH  H21  H21  H   0  1  N  N  N  18.202   -1.652  -13.333  -0.085  -4.749  -0.008  H21  2L6  69  
3VH  H22  H22  H   0  1  N  N  N  17.217   -1.404  -11.851  -1.405  -5.150   1.142  H22  2L6  70  
3VH  H23  H23  H   0  1  N  N  N  19.747   -0.345  -12.096  -2.033  -4.028  -1.257  H23  2L6  71  
3VH  H24  H24  H   0  1  N  N  N  19.105   -0.907  -10.515  -2.868  -3.454   0.224  H24  2L6  72  
3VH  H25  H25  H   0  1  N  N  N  21.227   -2.106  -12.245  -0.674  -2.133  -1.371  H25  2L6  73  
3VH  H26  H26  H   0  1  N  N  N  22.131    0.403  -10.844  -2.529  -1.872  -3.114  H26  2L9  74  
3VH  H27  H27  H   0  1  N  N  N  22.775   -0.983  -11.788  -3.513  -2.950  -2.085  H27  2L9  75  
3VH  H28  H28  H   0  1  N  N  N  24.826   -1.019  -10.559  -4.419  -0.848  -4.054  H28  2L9  76  
3VH  H29  H29  H   0  1  N  N  N  24.472    0.742  -10.559  -5.258  -2.342  -3.520  H29  2L9  77  
3VH  H30  H30  H   0  1  N  N  N  23.309    0.623   -8.449  -5.859  -1.395  -1.434  H30  2L9  78  
3VH  H31  H31  H   0  1  N  N  N  23.409   -2.417   -8.443  -3.908   0.805  -2.017  H31  2L9  79  
3VH  H32  H32  H   0  1  N  N  N  25.930   -0.052   -8.207  -7.167  -0.251  -3.286  H32  2L9  80  
3VH  H33  H33  H   0  1  N  N  N  26.040   -1.212   -6.231  -7.639   1.847  -2.742  H33  2L9  81  
3VH  H34  H34  H   0  1  N  N  N  23.988   -2.979   -6.373  -5.077   2.692  -1.918  H34  2L9  82  
3VH  H35  H35  H   0  1  N  N  N  25.253   -2.242   -4.043  -7.233   4.231  -1.635  H35  2L9  83  
3VH  H36  H36  H   0  1  N  N  N  22.896   -1.604   -2.701  -7.599   4.182   0.877  H36  2L9  84  
3VH  H37  H37  H   0  1  N  N  N  21.114   -1.966   -4.734  -5.582   2.638   1.688  H37  2L9  85  
3VH  H38  H38  H   0  1  N  N  N  20.340    1.241   -3.716  -8.683   1.100   2.921  H38  2L9  86  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3VH  C33  C32  SING  N  N   1  
3VH  C17  C18  DOUB  Y  N   2  
3VH  C17  C16  SING  Y  N   3  
3VH  C18  C19  SING  Y  N   4  
3VH  C32  O5   DOUB  N  N   5  
3VH  C32  N4   SING  N  N   6  
3VH  C16  C14  DOUB  Y  N   7  
3VH  N4   C12  SING  N  N   8  
3VH  C19  C15  DOUB  Y  N   9  
3VH  C14  C15  SING  Y  N  10  
3VH  C14  C13  SING  N  N  11  
3VH  C15  CL   SING  N  N  12  
3VH  C12  C13  SING  N  N  13  
3VH  C12  C11  SING  N  N  14  
3VH  O4   C11  DOUB  N  N  15  
3VH  C11  N5   SING  N  N  16  
3VH  N5   C30  SING  N  N  17  
3VH  N5   C35  SING  N  N  18  
3VH  C26  C28  DOUB  N  N  19  
3VH  C26  C35  SING  N  N  20  
3VH  C28  C27  SING  N  N  21  
3VH  C30  C29  SING  N  N  22  
3VH  C35  C31  SING  N  N  23  
3VH  C35  C34  SING  N  N  24  
3VH  C24  C27  SING  N  N  25  
3VH  C24  C9   SING  N  N  26  
3VH  C31  O3   DOUB  N  N  27  
3VH  C31  N3   SING  N  N  28  
3VH  C27  N3   SING  N  N  29  
3VH  N3   C10  SING  N  N  30  
3VH  C9   C10  SING  N  N  31  
3VH  C10  C20  SING  N  N  32  
3VH  C34  C29  SING  N  N  33  
3VH  C22  C23  SING  N  N  34  
3VH  C22  N2   SING  N  N  35  
3VH  C23  C8   SING  N  N  36  
3VH  C20  N2   SING  N  N  37  
3VH  C20  O6   DOUB  N  N  38  
3VH  N2   C21  SING  N  N  39  
3VH  C8   C21  SING  N  N  40  
3VH  C8   C7   SING  N  N  41  
3VH  C21  C25  SING  N  N  42  
3VH  C7   C6   DOUB  N  N  43  
3VH  O7   C25  DOUB  N  N  44  
3VH  C25  N1   SING  N  N  45  
3VH  C6   C5   SING  N  N  46  
3VH  N1   C5   SING  N  N  47  
3VH  N1   C2   SING  N  N  48  
3VH  C5   C4   SING  N  N  49  
3VH  O1   C1   DOUB  N  N  50  
3VH  C2   C1   SING  N  N  51  
3VH  C2   C3   SING  N  N  52  
3VH  C1   O2   SING  N  N  53  
3VH  C4   C3   DOUB  N  N  54  
3VH  C19  H1   SING  N  N  55  
3VH  C18  H2   SING  N  N  56  
3VH  C17  H3   SING  N  N  57  
3VH  C16  H4   SING  N  N  58  
3VH  C13  H5   SING  N  N  59  
3VH  C13  H6   SING  N  N  60  
3VH  C12  H7   SING  N  N  61  
3VH  N4   H8   SING  N  N  62  
3VH  C33  H9   SING  N  N  63  
3VH  C33  H10  SING  N  N  64  
3VH  C33  H11  SING  N  N  65  
3VH  C30  H12  SING  N  N  66  
3VH  C30  H13  SING  N  N  67  
3VH  C29  H14  SING  N  N  68  
3VH  C29  H15  SING  N  N  69  
3VH  C34  H16  SING  N  N  70  
3VH  C34  H17  SING  N  N  71  
3VH  C26  H18  SING  N  N  72  
3VH  C28  H19  SING  N  N  73  
3VH  C27  H20  SING  N  N  74  
3VH  C24  H21  SING  N  N  75  
3VH  C24  H22  SING  N  N  76  
3VH  C9   H23  SING  N  N  77  
3VH  C9   H24  SING  N  N  78  
3VH  C10  H25  SING  N  N  79  
3VH  C22  H26  SING  N  N  80  
3VH  C22  H27  SING  N  N  81  
3VH  C23  H28  SING  N  N  82  
3VH  C23  H29  SING  N  N  83  
3VH  C8   H30  SING  N  N  84  
3VH  C21  H31  SING  N  N  85  
3VH  C7   H32  SING  N  N  86  
3VH  C6   H33  SING  N  N  87  
3VH  C5   H34  SING  N  N  88  
3VH  C4   H35  SING  N  N  89  
3VH  C3   H36  SING  N  N  90  
3VH  C2   H37  SING  N  N  91  
3VH  O2   H38  SING  N  N  92  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3VH  SMILES            ACDLabs               12.01  "O=C(O)C2C=CC1C=CC7C(C(=O)N12)N(C(=O)C4N3C(=O)C6(C=CC3CC4)N(C(=O)C(NC(=O)C)Cc5ccccc5Cl)CCC6)CC7"  
3VH  InChI             InChI                 1.03   "InChI=1S/C35H38ClN5O7/c1-20(42)37-26(19-22-5-2-3-6-25(22)36)30(43)39-17-4-15-35(39)16-13-24-9-11-27(41(24)34(35)48)31(44)38-18-14-21-7-8-23-10-12-28(33(46)47)40(23)32(45)29(21)38/h2-3,5-8,10,12-13,16,21,23-24,26-29H,4,9,11,14-15,17-19H2,1H3,(H,37,42)(H,46,47)/t21-,23-,24-,26-,27-,28-,29-,35+/m0/s1"  
3VH  InChIKey          InChI                 1.03   PORJLWGURWUCLW-QHVDBZGRSA-N  
3VH  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)N[C@@H](Cc1ccccc1Cl)C(=O)N2CCC[C@]23C=C[C@@H]4CC[C@H](N4C3=O)C(=O)N5CC[C@@H]6C=C[C@H]7C=C[C@H](N7C(=O)[C@@H]56)C(O)=O"  
3VH  SMILES            CACTVS                3.385  "CC(=O)N[CH](Cc1ccccc1Cl)C(=O)N2CCC[C]23C=C[CH]4CC[CH](N4C3=O)C(=O)N5CC[CH]6C=C[CH]7C=C[CH](N7C(=O)[CH]56)C(O)=O"  
3VH  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(=O)N[C@@H](Cc1ccccc1Cl)C(=O)N2CCC[C@]23C=C[C@@H]4CC[C@H](N4C3=O)C(=O)N5CC[C@H]6[C@H]5C(=O)N7[C@@H](C=C6)C=C[C@H]7C(=O)O"  
3VH  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(=O)NC(Cc1ccccc1Cl)C(=O)N2CCCC23C=CC4CCC(N4C3=O)C(=O)N5CCC6C5C(=O)N7C(C=C6)C=CC7C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
3VH  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3aR,5aS,8S,10aS)-1-({(3S,6R,8aS)-1'-[(2S)-2-(acetylamino)-3-(2-chlorophenyl)propanoyl]-5-oxo-1,2,3,8a-tetrahydrospiro[indolizine-6,2'-pyrrolidin]-3-yl}carbonyl)-10-oxo-1,2,3,3a,5a,8,10,10a-octahydrodipyrrolo[1,2-a:3',2'-e]azepine-8-carboxylic acid (non-preferred name)"  
3VH  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(3aR,5aS,8S,10aS)-1-[(3S,6R,8aS)-1'-[(2S)-2-acetamido-3-(2-chlorophenyl)propanoyl]-5-oxidanylidene-spiro[1,2,3,8a-tetrahydroindolizine-6,2'-pyrrolidine]-3-yl]carbonyl-10-oxidanylidene-2,3,3a,5a,8,10a-hexahydrodipyrrolo[3,2-b:3',1'-f]azepine-8-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3VH  "Create component"  2013-11-25  RCSB  
3VH  "Initial release"   2014-10-15  RCSB  
##
