data_25H
#

_chem_comp.id                                   25H
_chem_comp.name                                 "{2-[2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)ethoxy]ethyl}phosphonic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H14 N5 O5 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "9-(2-phosphonoethoxyethyl)guanine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-03-05
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       303.212
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    25H
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3GGJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
25H  N1    N1    N  0  1  N  N  N  16.894  17.724  20.448  -4.947   1.372   0.385  N1    25H   1  
25H  C8    C8    C  0  1  Y  N  N  18.508  14.033  18.446  -2.562  -2.394  -0.095  C8    25H   2  
25H  C6    C6    C  0  1  N  N  N  18.000  17.313  19.772  -5.035   0.055   0.677  C6    25H   3  
25H  N7    N7    N  0  1  Y  N  N  19.005  15.288  18.615  -3.720  -2.116   0.430  N7    25H   4  
25H  C5    C5    C  0  1  Y  N  N  18.063  15.993  19.298  -3.964  -0.790   0.303  C5    25H   5  
25H  C2    C2    C  0  1  N  N  N  15.857  16.875  20.668  -3.848   1.862  -0.255  C2    25H   6  
25H  OAD   OAD   O  0  1  N  N  N  18.892  10.605  14.867   5.139   1.743   0.845  OAD   25H   7  
25H  PAT   PAT   P  0  1  N  N  N  17.825  10.891  13.829   5.385   0.251   0.292  PAT   25H   8  
25H  OAE   OAE   O  0  1  N  N  N  16.866   9.747  13.545   6.775   0.201  -0.519  OAE   25H   9  
25H  OAC   OAC   O  0  1  N  N  N  18.413  11.458  12.557   5.444  -0.693   1.430  OAC   25H  10  
25H  CAJ   CAJ   C  0  1  N  N  N  16.786  12.215  14.512   4.017  -0.218  -0.817  CAJ   25H  11  
25H  CAH   CAH   C  0  1  N  N  N  16.460  11.887  15.972   2.714  -0.292  -0.018  CAH   25H  12  
25H  OAN   OAN   O  0  1  N  N  N  15.977  13.055  16.661   1.642  -0.660  -0.888  OAN   25H  13  
25H  CAG   CAG   C  0  1  N  N  N  15.362  12.745  17.910   0.373  -0.758  -0.237  CAG   25H  14  
25H  CAI   CAI   C  0  1  N  N  N  16.408  12.746  19.019  -0.695  -1.156  -1.258  CAI   25H  15  
25H  N9    N9    N  0  1  Y  N  N  17.271  13.942  18.996  -1.995  -1.256  -0.591  N9    25H  16  
25H  C4    C4    C  0  1  Y  N  N  16.984  15.137  19.538  -2.864  -0.225  -0.352  C4    25H  17  
25H  N3    N3    N  0  1  N  N  N  15.899  15.594  20.214  -2.846   1.088  -0.608  N3    25H  18  
25H  N2    N2    N  0  1  N  N  N  14.768  17.307  21.352  -3.785   3.203  -0.539  N2    25H  19  
25H  O6    O6    O  0  1  N  N  N  18.996  18.156  19.586  -6.014  -0.393   1.250  O6    25H  20  
25H  HN1   HN1   H  0  1  N  N  N  16.844  18.663  20.787  -5.670   1.970   0.628  HN1   25H  21  
25H  H8    H8    H  0  1  N  N  N  19.023  13.226  17.946  -2.116  -3.377  -0.132  H8    25H  22  
25H  HOAD  HOAD  H  0  0  N  N  N  19.740  10.545  14.442   5.090   2.416   0.153  HOAD  25H  23  
25H  HOAE  HOAE  H  0  0  N  N  N  16.666   9.724  12.617   7.548   0.440   0.010  HOAE  25H  24  
25H  HAJ   HAJ   H  0  1  N  N  N  17.325  13.173  14.459   3.917   0.527  -1.607  HAJ   25H  25  
25H  HAJA  HAJA  H  0  0  N  N  N  15.855  12.295  13.932   4.226  -1.192  -1.261  HAJA  25H  26  
25H  HAH   HAH   H  0  1  N  N  N  15.685  11.107  16.000   2.814  -1.037   0.771  HAH   25H  27  
25H  HAHA  HAHA  H  0  0  N  N  N  17.376  11.536  16.469   2.504   0.681   0.426  HAHA  25H  28  
25H  HAG   HAG   H  0  1  N  N  N  14.593  13.499  18.134   0.424  -1.513   0.548  HAG   25H  29  
25H  HAGA  HAGA  H  0  0  N  N  N  14.900  11.748  17.849   0.115   0.206   0.202  HAGA  25H  30  
25H  HAI   HAI   H  0  1  N  N  N  15.886  12.715  19.987  -0.746  -0.401  -2.043  HAI   25H  31  
25H  HAIA  HAIA  H  0  0  N  N  N  17.054  11.869  18.866  -0.436  -2.119  -1.697  HAIA  25H  32  
25H  HN2   HN2   H  0  1  N  N  N  14.889  18.263  21.618  -4.517   3.787  -0.285  HN2   25H  33  
25H  HN2A  HN2A  H  0  0  N  N  N  13.963  16.751  21.560  -3.010   3.567  -0.994  HN2A  25H  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
25H  N1   C6    SING  N  N   1  
25H  N1   C2    SING  N  N   2  
25H  C8   N7    DOUB  Y  N   3  
25H  C8   N9    SING  Y  N   4  
25H  C6   C5    SING  N  N   5  
25H  C6   O6    DOUB  N  N   6  
25H  N7   C5    SING  Y  N   7  
25H  C5   C4    DOUB  Y  N   8  
25H  C2   N3    DOUB  N  N   9  
25H  C2   N2    SING  N  N  10  
25H  OAD  PAT   SING  N  N  11  
25H  PAT  OAE   SING  N  N  12  
25H  PAT  OAC   DOUB  N  N  13  
25H  PAT  CAJ   SING  N  N  14  
25H  CAJ  CAH   SING  N  N  15  
25H  CAH  OAN   SING  N  N  16  
25H  OAN  CAG   SING  N  N  17  
25H  CAG  CAI   SING  N  N  18  
25H  CAI  N9    SING  N  N  19  
25H  N9   C4    SING  Y  N  20  
25H  C4   N3    SING  N  N  21  
25H  N1   HN1   SING  N  N  22  
25H  C8   H8    SING  N  N  23  
25H  OAD  HOAD  SING  N  N  24  
25H  OAE  HOAE  SING  N  N  25  
25H  CAJ  HAJ   SING  N  N  26  
25H  CAJ  HAJA  SING  N  N  27  
25H  CAH  HAH   SING  N  N  28  
25H  CAH  HAHA  SING  N  N  29  
25H  CAG  HAG   SING  N  N  30  
25H  CAG  HAGA  SING  N  N  31  
25H  CAI  HAI   SING  N  N  32  
25H  CAI  HAIA  SING  N  N  33  
25H  N2   HN2   SING  N  N  34  
25H  N2   HN2A  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
25H  SMILES            ACDLabs               10.04  "O=P(O)(O)CCOCCn1c2N=C(NC(=O)c2nc1)N"  
25H  SMILES_CANONICAL  CACTVS                3.341  "NC1=Nc2n(CCOCC[P](O)(O)=O)cnc2C(=O)N1"  
25H  SMILES            CACTVS                3.341  "NC1=Nc2n(CCOCC[P](O)(O)=O)cnc2C(=O)N1"  
25H  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc2c(n1CCOCCP(=O)(O)O)N=C(NC2=O)N"  
25H  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc2c(n1CCOCCP(=O)(O)O)N=C(NC2=O)N"  
25H  InChI             InChI                 1.03   "InChI=1S/C9H14N5O5P/c10-9-12-7-6(8(15)13-9)11-5-14(7)1-2-19-3-4-20(16,17)18/h5H,1-4H2,(H2,16,17,18)(H3,10,12,13,15)"  
25H  InChIKey          InChI                 1.03   KDWYBFCNTYIRFX-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
25H  "SYSTEMATIC NAME"  ACDLabs               10.04  "{2-[2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)ethoxy]ethyl}phosphonic acid"  
25H  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-[2-(2-amino-6-oxo-1H-purin-9-yl)ethoxy]ethylphosphonic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
25H  "Create component"      2009-03-05  PDBJ  
25H  "Modify aromatic_flag"  2011-06-04  RCSB  
25H  "Modify descriptor"     2011-06-04  RCSB  
25H  "Modify synonyms"       2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     25H
_pdbx_chem_comp_synonyms.name        "9-(2-phosphonoethoxyethyl)guanine"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
