data_0JH
# 
_chem_comp.id                                    0JH 
_chem_comp.name                                  "tert-butyl (2S)-3-[4-amino-7-(3-hydroxypropyl)-5-(4-methylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-6-yl]-2-cyanopropanoate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H29 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(E)-tert-butyl 3-(4-amino-7-(3-hydroxypropyl)-5-p-tolyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl)-2-cyanoacrylate, bound form" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-01-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        435.519 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0JH 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4D9U 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0JH N01 N01 N 0 1 N N N N N N -33.962 15.310 -19.882 3.939  2.646  -0.551 N01 0JH 1  
0JH C02 C02 C 0 1 Y N N N N N -33.538 14.796 -21.081 3.975  1.268  -0.671 C02 0JH 2  
0JH C03 C03 C 0 1 Y N N N N N -32.512 13.800 -21.172 2.846  0.492  -0.374 C03 0JH 3  
0JH C04 C04 C 0 1 Y N N N N N -32.216 13.443 -22.529 2.931  -0.904 -0.511 C04 0JH 4  
0JH N05 N05 N 0 1 Y N N N N N -31.201 12.462 -22.575 1.712  -1.424 -0.166 N05 0JH 5  
0JH C06 C06 C 0 1 N N N N N N -30.741 11.990 -23.928 1.379  -2.850 -0.172 C06 0JH 6  
0JH C07 C07 C 0 1 N N N N N N -29.717 12.849 -24.741 1.697  -3.454 1.198  C07 0JH 7  
0JH C08 C08 C 0 1 N N N N N N -29.221 12.008 -25.960 1.348  -4.944 1.191  C08 0JH 8  
0JH O09 O09 O 0 1 N N N N N N -28.540 10.843 -25.582 1.645  -5.508 2.470  O09 0JH 9  
0JH C10 C10 C 0 1 Y N N N N N -30.863 12.189 -21.204 0.851  -0.421 0.185  C10 0JH 10 
0JH C11 C11 C 0 1 N N N N N N -29.838 11.232 -20.598 -0.577 -0.617 0.623  C11 0JH 11 
0JH C12 C12 C 0 1 N N S N N N -28.542 11.224 -21.487 -1.509 -0.426 -0.576 C12 0JH 12 
0JH C13 C13 C 0 1 N N N N N N -27.447 10.169 -21.164 -2.942 -0.488 -0.113 C13 0JH 13 
0JH O14 O14 O 0 1 N N N N N N -27.759 8.851  -21.320 -3.940 -0.346 -0.999 O14 0JH 14 
0JH C15 C15 C 0 1 N N N N N N -26.852 7.764  -21.060 -5.295 -0.417 -0.483 C15 0JH 15 
0JH C16 C16 C 0 1 N N N N N N -25.713 7.768  -22.101 -6.289 -0.234 -1.632 C16 0JH 16 
0JH C17 C17 C 0 1 N N N N N N -27.601 6.437  -21.166 -5.520 -1.780 0.173  C17 0JH 17 
0JH C18 C18 C 0 1 N N N N N N -26.184 7.909  -19.694 -5.504 0.689  0.553  C18 0JH 18 
0JH O19 O19 O 0 1 N N N N N N -26.333 10.514 -20.779 -3.192 -0.667 1.055  O19 0JH 19 
0JH C20 C20 C 0 1 N N N N N N -27.896 12.512 -21.333 -1.265 -1.492 -1.561 C20 0JH 20 
0JH N21 N21 N 0 1 N N N N N N -27.441 13.558 -21.198 -1.076 -2.315 -2.321 N21 0JH 21 
0JH C22 C22 C 0 1 Y N N N N N -31.610 13.011 -20.349 1.479  0.776  0.081  C22 0JH 22 
0JH C23 C23 C 0 1 Y N N N N N -31.486 12.917 -18.856 0.900  2.110  0.369  C23 0JH 23 
0JH C24 C24 C 0 1 Y N N N N N -30.433 13.475 -18.113 0.682  3.017  -0.667 C24 0JH 24 
0JH C25 C25 C 0 1 Y N N N N N -30.315 13.318 -16.728 0.143  4.257  -0.393 C25 0JH 25 
0JH C26 C26 C 0 1 Y N N N N N -31.244 12.582 -16.002 -0.183 4.601  0.907  C26 0JH 26 
0JH C27 C27 C 0 1 N N N N N N -31.185 12.374 -14.520 -0.772 5.957  1.200  C27 0JH 27 
0JH C28 C28 C 0 1 Y N N N N N -32.290 12.009 -16.722 0.031  3.705  1.939  C28 0JH 28 
0JH C29 C29 C 0 1 Y N N N N N -32.401 12.163 -18.104 0.564  2.460  1.676  C29 0JH 29 
0JH N30 N30 N 0 1 Y N N N N N -32.822 13.976 -23.666 4.084  -1.434 -0.917 N30 0JH 30 
0JH C31 C31 C 0 1 Y N N N N N -33.766 14.899 -23.405 5.119  -0.668 -1.184 C31 0JH 31 
0JH N32 N32 N 0 1 Y N N N N N -34.175 15.349 -22.189 5.079  0.648  -1.075 N32 0JH 32 
0JH H1  H1  H 0 1 N N N N N N -34.666 16.001 -20.045 3.125  3.087  -0.259 H1  0JH 33 
0JH H2  H2  H 0 1 N N N N N N -34.341 14.575 -19.320 4.728  3.171  -0.756 H2  0JH 34 
0JH H3  H3  H 0 1 N N N N N N -31.640 11.889 -24.553 0.317  -2.974 -0.386 H3  0JH 35 
0JH H4  H4  H 0 1 N N N N N N -30.283 11.001 -23.782 1.965  -3.357 -0.938 H4  0JH 36 
0JH H5  H5  H 0 1 N N N N N N -28.863 13.113 -24.100 2.759  -3.330 1.411  H5  0JH 37 
0JH H6  H6  H 0 1 N N N N N N -30.205 13.768 -25.098 1.110  -2.947 1.964  H6  0JH 38 
0JH H7  H7  H 0 1 N N N N N N -28.543 12.630 -26.562 0.287  -5.068 0.978  H7  0JH 39 
0JH H8  H8  H 0 1 N N N N N N -30.093 11.723 -26.567 1.935  -5.451 0.426  H8  0JH 40 
0JH H9  H9  H 0 1 N N N N N N -28.262 10.372 -26.359 1.449  -6.452 2.539  H9  0JH 41 
0JH H10 H10 H 0 1 N N N N N N -30.262 10.218 -20.558 -0.700 -1.623 1.023  H10 0JH 42 
0JH H11 H11 H 0 1 N N N N N N -29.583 11.563 -19.581 -0.824 0.113  1.395  H11 0JH 43 
0JH H12 H12 H 0 1 N N N N N N -28.850 11.089 -22.534 -1.317 0.544  -1.034 H12 0JH 44 
0JH H13 H13 H 0 1 N N N N N N -25.025 6.935  -21.895 -6.140 -1.021 -2.371 H13 0JH 45 
0JH H14 H14 H 0 1 N N N N N N -26.137 7.653  -23.109 -7.306 -0.287 -1.245 H14 0JH 46 
0JH H15 H15 H 0 1 N N N N N N -25.165 8.720  -22.041 -6.128 0.738  -2.100 H15 0JH 47 
0JH H16 H16 H 0 1 N N N N N N -28.418 6.417  -20.430 -4.812 -1.911 0.992  H16 0JH 48 
0JH H17 H17 H 0 1 N N N N N N -28.017 6.331  -22.179 -6.537 -1.834 0.561  H17 0JH 49 
0JH H18 H18 H 0 1 N N N N N N -26.907 5.607  -20.966 -5.371 -2.568 -0.565 H18 0JH 50 
0JH H19 H19 H 0 1 N N N N N N -26.953 7.912  -18.908 -5.344 1.660  0.086  H19 0JH 51 
0JH H20 H20 H 0 1 N N N N N N -25.497 7.066  -19.531 -6.522 0.636  0.941  H20 0JH 52 
0JH H21 H21 H 0 1 N N N N N N -25.621 8.853  -19.660 -4.797 0.558  1.372  H21 0JH 53 
0JH H22 H22 H 0 1 N N N N N N -29.682 14.050 -18.634 0.936  2.750  -1.683 H22 0JH 54 
0JH H23 H23 H 0 1 N N N N N N -29.485 13.778 -16.212 -0.026 4.961  -1.195 H23 0JH 55 
0JH H24 H24 H 0 1 N N N N N N -31.738 13.179 -14.014 -1.859 5.902  1.135  H24 0JH 56 
0JH H25 H25 H 0 1 N N N N N N -31.638 11.404 -14.268 -0.484 6.269  2.203  H25 0JH 57 
0JH H26 H26 H 0 1 N N N N N N -30.136 12.386 -14.190 -0.401 6.679  0.473  H26 0JH 58 
0JH H27 H27 H 0 1 N N N N N N -33.035 11.430 -16.196 -0.225 3.979  2.952  H27 0JH 59 
0JH H28 H28 H 0 1 N N N N N N -33.223 11.684 -18.615 0.726  1.759  2.482  H28 0JH 60 
0JH H29 H29 H 0 1 N N N N N N -34.257 15.334 -24.263 6.037  -1.133 -1.511 H29 0JH 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0JH C08 O09 SING N N 1  
0JH C08 C07 SING N N 2  
0JH C07 C06 SING N N 3  
0JH C06 N05 SING N N 4  
0JH N30 C31 DOUB Y N 5  
0JH N30 C04 SING Y N 6  
0JH C31 N32 SING Y N 7  
0JH N05 C04 SING Y N 8  
0JH N05 C10 SING Y N 9  
0JH C04 C03 DOUB Y N 10 
0JH N32 C02 DOUB Y N 11 
0JH C16 C15 SING N N 12 
0JH C12 C20 SING N N 13 
0JH C12 C13 SING N N 14 
0JH C12 C11 SING N N 15 
0JH C20 N21 TRIP N N 16 
0JH O14 C13 SING N N 17 
0JH O14 C15 SING N N 18 
0JH C10 C11 SING N N 19 
0JH C10 C22 DOUB Y N 20 
0JH C03 C02 SING Y N 21 
0JH C03 C22 SING Y N 22 
0JH C17 C15 SING N N 23 
0JH C13 O19 DOUB N N 24 
0JH C02 N01 SING N N 25 
0JH C15 C18 SING N N 26 
0JH C22 C23 SING N N 27 
0JH C23 C24 DOUB Y N 28 
0JH C23 C29 SING Y N 29 
0JH C24 C25 SING Y N 30 
0JH C29 C28 DOUB Y N 31 
0JH C25 C26 DOUB Y N 32 
0JH C28 C26 SING Y N 33 
0JH C26 C27 SING N N 34 
0JH N01 H1  SING N N 35 
0JH N01 H2  SING N N 36 
0JH C06 H3  SING N N 37 
0JH C06 H4  SING N N 38 
0JH C07 H5  SING N N 39 
0JH C07 H6  SING N N 40 
0JH C08 H7  SING N N 41 
0JH C08 H8  SING N N 42 
0JH O09 H9  SING N N 43 
0JH C11 H10 SING N N 44 
0JH C11 H11 SING N N 45 
0JH C12 H12 SING N N 46 
0JH C16 H13 SING N N 47 
0JH C16 H14 SING N N 48 
0JH C16 H15 SING N N 49 
0JH C17 H16 SING N N 50 
0JH C17 H17 SING N N 51 
0JH C17 H18 SING N N 52 
0JH C18 H19 SING N N 53 
0JH C18 H20 SING N N 54 
0JH C18 H21 SING N N 55 
0JH C24 H22 SING N N 56 
0JH C25 H23 SING N N 57 
0JH C27 H24 SING N N 58 
0JH C27 H25 SING N N 59 
0JH C27 H26 SING N N 60 
0JH C28 H27 SING N N 61 
0JH C29 H28 SING N N 62 
0JH C31 H29 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0JH SMILES           ACDLabs              12.01 "O=C(OC(C)(C)C)C(C#N)Cc2c(c1c(ncnc1n2CCCO)N)c3ccc(cc3)C"                                                                                                                       
0JH InChI            InChI                1.03  "InChI=1S/C24H29N5O3/c1-15-6-8-16(9-7-15)19-18(12-17(13-25)23(31)32-24(2,3)4)29(10-5-11-30)22-20(19)21(26)27-14-28-22/h6-9,14,17,30H,5,10-12H2,1-4H3,(H2,26,27,28)/t17-/m0/s1" 
0JH InChIKey         InChI                1.03  YQNJEMHLWSEPFO-KRWDZBQOSA-N                                                                                                                                                    
0JH SMILES_CANONICAL CACTVS               3.370 "Cc1ccc(cc1)c2c(C[C@@H](C#N)C(=O)OC(C)(C)C)n(CCCO)c3ncnc(N)c23"                                                                                                                
0JH SMILES           CACTVS               3.370 "Cc1ccc(cc1)c2c(C[CH](C#N)C(=O)OC(C)(C)C)n(CCCO)c3ncnc(N)c23"                                                                                                                  
0JH SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1ccc(cc1)c2c(n(c3c2c(ncn3)N)CCCO)C[C@@H](C#N)C(=O)OC(C)(C)C"                                                                                                                
0JH SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1ccc(cc1)c2c(n(c3c2c(ncn3)N)CCCO)CC(C#N)C(=O)OC(C)(C)C"                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0JH "SYSTEMATIC NAME" ACDLabs              12.01 "tert-butyl (2S)-3-[4-amino-7-(3-hydroxypropyl)-5-(4-methylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-6-yl]-2-cyanopropanoate" 
0JH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "tert-butyl (2S)-3-[4-azanyl-5-(4-methylphenyl)-7-(3-oxidanylpropyl)pyrrolo[2,3-d]pyrimidin-6-yl]-2-cyano-propanoate"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0JH "Create component" 2012-01-23 RCSB 
0JH "Modify formula"   2012-04-02 RCSB 
0JH "Modify synonyms"  2020-06-05 PDBE 
0JH "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      0JH 
_pdbx_chem_comp_synonyms.name         "(E)-tert-butyl 3-(4-amino-7-(3-hydroxypropyl)-5-p-tolyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl)-2-cyanoacrylate, bound form" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            0JH 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C11 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
