data_YWG
# 
_chem_comp.id                                    YWG 
_chem_comp.name                                  "N-[(4S)-4-amino-5-oxohexyl]urea" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C7 H15 N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-04-01 
_chem_comp.pdbx_modified_date                    2022-10-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        173.213 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YWG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7MAV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YWG C20  C4  C 0 1 N N S 24.997 -17.278 30.389 -2.295 -0.450 0.403  C20  YWG 1  
YWG C28  C9  C 0 1 N N N 26.301 -17.218 31.161 -1.065 0.286  -0.130 C28  YWG 2  
YWG C27  C21 C 0 1 N N N 23.662 -16.722 30.966 -3.540 0.311  0.023  C27  YWG 3  
YWG C29  C22 C 0 1 N N N 22.778 -15.779 30.138 -3.899 1.579  0.753  C29  YWG 4  
YWG C31  C23 C 0 1 N N N 27.110 -18.392 30.581 0.203  -0.417 0.360  C31  YWG 5  
YWG C32  C24 C 0 1 N N N 28.362 -18.540 31.438 1.433  0.319  -0.172 C32  YWG 6  
YWG C34  C25 C 0 1 N N N 29.068 -19.901 33.424 3.859  0.122  -0.051 C34  YWG 7  
YWG N18  N3  N 0 1 N N N 25.229 -16.558 29.116 -2.349 -1.798 -0.179 N18  YWG 8  
YWG N33  N4  N 0 1 N N N 28.013 -19.348 32.596 2.647  -0.354 0.297  N33  YWG 9  
YWG N35  N5  N 0 1 N N N 30.479 -19.660 33.118 4.975  -0.498 0.381  N35  YWG 10 
YWG O30  O5  O 0 1 N N N 23.237 -17.090 32.001 -4.248 -0.096 -0.866 O30  YWG 11 
YWG O36  O6  O 0 1 N N N 28.782 -20.584 34.336 3.945  1.110  -0.753 O36  YWG 12 
YWG H201 H6  H 0 0 N N N 24.817 -18.335 30.143 -2.232 -0.525 1.488  H201 YWG 13 
YWG H281 H10 H 0 0 N N N 26.817 -16.262 30.990 -1.083 0.284  -1.220 H281 YWG 14 
YWG H282 H11 H 0 0 N N N 26.127 -17.353 32.239 -1.072 1.315  0.231  H282 YWG 15 
YWG H1   H22 H 0 1 N N N 21.838 -15.590 30.677 -3.147 1.785  1.515  H1   YWG 16 
YWG H2   H23 H 0 1 N N N 23.307 -14.828 29.978 -3.936 2.408  0.046  H2   YWG 17 
YWG H3   H24 H 0 1 N N N 22.556 -16.244 29.166 -4.874 1.462  1.227  H3   YWG 18 
YWG H311 H25 H 0 0 N N N 26.515 -19.316 30.620 0.221  -0.414 1.450  H311 YWG 19 
YWG H312 H26 H 0 0 N N N 27.389 -18.179 29.539 0.210  -1.446 -0.001 H312 YWG 20 
YWG H322 H27 H 0 0 N N N 29.155 -19.037 30.860 1.415  0.317  -1.262 H322 YWG 21 
YWG H321 H28 H 0 0 N N N 28.712 -17.549 31.764 1.426  1.348  0.189  H321 YWG 22 
YWG H181 H36 H 0 0 N N N 26.080 -16.880 28.701 -3.117 -2.328 0.206  H181 YWG 23 
YWG H331 H37 H 0 0 N N N 27.054 -19.521 32.820 2.578  -1.142 0.858  H331 YWG 24 
YWG H352 H38 H 0 0 N N N 31.191 -20.076 33.684 5.847  -0.155 0.131  H352 YWG 25 
YWG H351 H39 H 0 0 N N N 30.731 -19.080 32.343 4.906  -1.286 0.942  H351 YWG 26 
YWG H4   H4  H 0 1 N Y N 24.467 -16.731 28.492 -2.408 -1.755 -1.185 H4   YWG 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YWG N18 C20  SING N N 1  
YWG C29 C27  SING N N 2  
YWG C20 C27  SING N N 3  
YWG C20 C28  SING N N 4  
YWG C31 C28  SING N N 5  
YWG C31 C32  SING N N 6  
YWG C27 O30  DOUB N N 7  
YWG C32 N33  SING N N 8  
YWG N33 C34  SING N N 9  
YWG N35 C34  SING N N 10 
YWG C34 O36  DOUB N N 11 
YWG C20 H201 SING N N 12 
YWG C28 H281 SING N N 13 
YWG C28 H282 SING N N 14 
YWG C29 H1   SING N N 15 
YWG C29 H2   SING N N 16 
YWG C29 H3   SING N N 17 
YWG C31 H311 SING N N 18 
YWG C31 H312 SING N N 19 
YWG C32 H322 SING N N 20 
YWG C32 H321 SING N N 21 
YWG N18 H181 SING N N 22 
YWG N33 H331 SING N N 23 
YWG N35 H352 SING N N 24 
YWG N35 H351 SING N N 25 
YWG N18 H4   SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YWG SMILES           ACDLabs              12.01 "NC(=O)NCCCC(N)C(C)=O"                                                                  
YWG InChI            InChI                1.03  "InChI=1S/C7H15N3O2/c1-5(11)6(8)3-2-4-10-7(9)12/h6H,2-4,8H2,1H3,(H3,9,10,12)/t6-/m0/s1" 
YWG InChIKey         InChI                1.03  QCONBSSERWFISK-LURJTMIESA-N                                                             
YWG SMILES_CANONICAL CACTVS               3.385 "CC(=O)[C@@H](N)CCCNC(N)=O"                                                             
YWG SMILES           CACTVS               3.385 "CC(=O)[CH](N)CCCNC(N)=O"                                                               
YWG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)[C@H](CCCNC(=O)N)N"                                                              
YWG SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)C(CCCNC(=O)N)N"                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YWG "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(4S)-4-amino-5-oxohexyl]urea"                
YWG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(4~{S})-4-azanyl-5-oxidanylidene-hexyl]urea" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YWG "Create component" 2021-04-01 RCSB 
YWG "Initial release"  2022-10-12 RCSB 
# 
