data_VIG
# 
_chem_comp.id                                    VIG 
_chem_comp.name                                  "4-AMINO HEXANOIC ACID" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H13 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2003-06-03 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        131.173 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VIG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1OHW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VIG "C1'" "C1'" C 0 1 N N N N N N 11.998 -3.285 17.409 0.084  -0.028 -2.356 "C1'" VIG 1  
VIG "O1'" "O1'" O 0 1 N N N N N N 12.438 -3.955 18.347 -0.618 -0.231 -3.481 "O1'" VIG 2  
VIG "O2'" "O2'" O 0 1 N N N N N N 11.559 -3.818 16.395 1.221  0.376  -2.418 "O2'" VIG 3  
VIG C1    C1    C 0 1 N N N N N N 11.982 -1.780 17.502 -0.543 -0.305 -1.014 C1    VIG 4  
VIG C2    C2    C 0 1 N N N N N N 10.579 -1.329 17.886 0.463  0.005  0.094  C2    VIG 5  
VIG C3    C3    C 0 1 N N R N N N 10.653 -0.038 18.698 -0.174 -0.276 1.456  C3    VIG 6  
VIG C4    C4    C 0 1 N N N N N N 10.642 1.174  17.772 0.833  0.035  2.565  C4    VIG 7  
VIG C5    C5    C 0 1 N N N N N N 10.080 2.456  18.374 0.195  -0.246 3.927  C5    VIG 8  
VIG N3    N3    N 0 1 N N N N N N 9.465  0.029  19.537 -1.363 0.569  1.623  N3    VIG 9  
VIG "H1'" "H1'" H 0 1 N N N N N N 12.778 -3.542 19.132 -0.215 -0.053 -4.342 "H1'" VIG 10 
VIG H1C1  1H1C  H 0 0 N N N N N N 12.700 -1.449 18.267 -0.832 -1.355 -0.958 H1C1  VIG 11 
VIG H1C2  2H1C  H 0 0 N N N N N N 12.264 -1.342 16.533 -1.426 0.321  -0.890 H1C2  VIG 12 
VIG H2C1  1H2C  H 0 0 N N N N N N 9.990  -1.153 16.974 0.753  1.054  0.038  H2C1  VIG 13 
VIG H2C2  2H2C  H 0 0 N N N N N N 10.100 -2.112 18.493 1.346  -0.622 -0.030 H2C2  VIG 14 
VIG H3    H3    H 0 1 N N N N N N 11.577 -0.033 19.295 -0.463 -1.325 1.512  H3    VIG 15 
VIG H4C1  1H4C  H 0 0 N N N N N N 11.678 1.372  17.461 1.122  1.084  2.509  H4C1  VIG 16 
VIG H4C2  2H4C  H 0 0 N N N N N N 9.971  0.912  16.941 1.715  -0.592 2.440  H4C2  VIG 17 
VIG H5C1  1H5C  H 0 0 N N N N N N 8.981  2.419  18.357 0.912  -0.024 4.717  H5C1  VIG 18 
VIG H5C2  2H5C  H 0 0 N N N N N N 10.427 2.556  19.413 -0.687 0.380  4.051  H5C2  VIG 19 
VIG H5C3  3H5C  H 0 0 N N N N N N 10.427 3.319  17.787 -0.094 -1.295 3.982  H5C3  VIG 20 
VIG H3N1  1H3N  H 0 0 N N N N N N 9.148  -0.925 19.761 -1.049 1.526  1.565  H3N1  VIG 21 
VIG H3N2  2H3N  H 0 0 N N N N N N 9.688  0.530  20.409 -1.950 0.407  0.819  H3N2  VIG 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VIG "C1'" "O1'" SING N N 1  
VIG "C1'" "O2'" DOUB N N 2  
VIG "C1'" C1    SING N N 3  
VIG "O1'" "H1'" SING N N 4  
VIG C1    C2    SING N N 5  
VIG C1    H1C1  SING N N 6  
VIG C1    H1C2  SING N N 7  
VIG C2    C3    SING N N 8  
VIG C2    H2C1  SING N N 9  
VIG C2    H2C2  SING N N 10 
VIG C3    C4    SING N N 11 
VIG C3    N3    SING N N 12 
VIG C3    H3    SING N N 13 
VIG C4    C5    SING N N 14 
VIG C4    H4C1  SING N N 15 
VIG C4    H4C2  SING N N 16 
VIG C5    H5C1  SING N N 17 
VIG C5    H5C2  SING N N 18 
VIG C5    H5C3  SING N N 19 
VIG N3    H3N1  SING N N 20 
VIG N3    H3N2  SING N N 21 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VIG SMILES           ACDLabs              10.04 "O=C(O)CCC(N)CC"                                                         
VIG SMILES_CANONICAL CACTVS               3.341 "CC[C@@H](N)CCC(O)=O"                                                    
VIG SMILES           CACTVS               3.341 "CC[CH](N)CCC(O)=O"                                                      
VIG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC[C@H](CCC(=O)O)N"                                                     
VIG SMILES           "OpenEye OEToolkits" 1.5.0 "CCC(CCC(=O)O)N"                                                         
VIG InChI            InChI                1.03  "InChI=1S/C6H13NO2/c1-2-5(7)3-4-6(8)9/h5H,2-4,7H2,1H3,(H,8,9)/t5-/m1/s1" 
VIG InChIKey         InChI                1.03  ROFNJLCLYMMXCT-RXMQYKEDSA-N                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VIG "SYSTEMATIC NAME" ACDLabs              10.04 "(4R)-4-aminohexanoic acid" 
VIG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(4R)-4-aminohexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VIG "Create component"  2003-06-03 EBI  
VIG "Modify descriptor" 2011-06-04 RCSB 
VIG "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VIG 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C5 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
