data_VHG
# 
_chem_comp.id                                    VHG 
_chem_comp.name                                  "3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-5-[[(3~{S})-4-ethyl-3-methyl-2-oxidanylidene-1,3-dihydropyrrol-5-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H40 N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-08-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        588.694 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VHG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7JR5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VHG C1A C1  C 0 1 Y N N N N N -32.418 1.094  2.314  1.059  -0.354 -0.577 C1A VHG 1  
VHG C1B C2  C 0 1 N N N N N N -34.136 -3.132 2.988  5.390  -0.020 0.272  C1B VHG 2  
VHG C1C C3  C 0 1 N N N N N N -35.973 4.894  6.080  -7.261 1.423  -0.571 C1C VHG 3  
VHG C1D C4  C 0 1 Y N N N N N -32.943 5.938  3.138  -3.138 0.431  0.587  C1D VHG 4  
VHG C2A C5  C 0 1 Y N N N N N -31.900 0.237  1.395  1.269  -1.547 0.017  C2A VHG 5  
VHG C2B C6  C 0 1 N N N N N N -34.230 -3.825 4.290  6.734  0.335  0.527  C2B VHG 6  
VHG C2C C7  C 0 1 N N S N N N -36.600 6.228  6.214  -7.238 0.039  -1.188 C2C VHG 7  
VHG C2D C8  C 0 1 Y N N N N N -32.027 6.136  1.999  -2.652 1.688  0.624  C2D VHG 8  
VHG C3A C9  C 0 1 Y N N N N N -32.585 -0.903 1.433  2.473  -1.451 0.742  C3A VHG 9  
VHG C3B C10 C 0 1 N N N N N N -33.607 -5.098 4.192  7.490  -0.172 -0.491 C3B VHG 10 
VHG C3C C11 C 0 1 N N N N N N -35.822 7.204  5.352  -6.081 -0.645 -0.489 C3C VHG 11 
VHG C3D C12 C 0 1 Y N N N N N -31.479 4.832  1.628  -1.461 1.702  -0.129 C3D VHG 12 
VHG C4A C13 C 0 1 Y N N N N N -33.581 -0.784 2.384  2.954  -0.204 0.564  C4A VHG 13 
VHG C4B C14 C 0 1 N N N N N N -33.037 -5.337 2.843  6.510  -0.869 -1.397 C4B VHG 14 
VHG C4C C15 C 0 1 N N N N N N -34.675 6.538  4.690  -5.580 0.232  0.355  C4C VHG 15 
VHG C4D C16 C 0 1 Y N N N N N -32.091 3.766  2.532  -1.265 0.452  -0.598 C4D VHG 16 
VHG CAA C17 C 0 1 N N N N N N -30.736 0.550  0.474  0.378  -2.759 -0.077 CAA VHG 17 
VHG CAB C18 C 0 1 N N N N N N -33.493 -6.117 5.295  8.893  -0.066 -0.660 CAB VHG 18 
VHG CAC C19 C 0 1 N N N N N N -36.138 8.459  5.284  -5.599 -2.055 -0.714 CAC VHG 19 
VHG CAD C20 C 0 1 N N N N N N -30.508 4.544  0.481  -0.570 2.893  -0.368 CAD VHG 20 
VHG CBA C21 C 0 1 N N N N N N -29.934 -0.733 0.273  -0.656 -2.721 1.049  CBA VHG 21 
VHG CBB C22 C 0 1 N N N N N N -32.281 -6.477 5.648  9.486  -0.627 -1.726 CBB VHG 22 
VHG CBC C23 C 0 1 N N N N N N -36.928 8.960  6.430  -6.421 -3.019 0.144  CBC VHG 23 
VHG CBD C24 C 0 1 N N N N N N -29.266 5.424  0.498  0.486  2.970  0.737  CBD VHG 24 
VHG CHB C25 C 0 1 N N N N N N -34.552 -1.920 2.724  4.226  0.345  1.156  CHB VHG 25 
VHG CHD C26 C 0 1 N N N N N N -33.752 7.006  3.871  -4.403 -0.047 1.253  CHD VHG 26 
VHG CMA C27 C 0 1 N N N N N N -32.290 -2.101 0.528  3.107  -2.542 1.566  CMA VHG 27 
VHG CMB C28 C 0 1 N N N N N N -34.924 -3.212 5.498  7.240  1.128  1.705  CMB VHG 28 
VHG CMC C29 C 0 1 N N N N N N -36.397 6.641  7.665  -6.981 0.125  -2.694 CMC VHG 29 
VHG CMD C30 C 0 1 N N N N N N -31.711 7.474  1.334  -3.268 2.862  1.339  CMD VHG 30 
VHG NA  N1  N 0 1 Y N N N N N -33.446 0.456  2.947  2.093  0.472  -0.250 NA  VHG 31 
VHG NB  N2  N 0 1 N N N N N N -33.353 -4.073 2.041  5.293  -0.706 -0.842 NB  VHG 32 
VHG NC  N3  N 0 1 N N N N N N -34.778 5.076  5.146  -6.248 1.442  0.318  NC  VHG 33 
VHG ND  N4  N 0 1 Y N N N N N -32.973 4.497  3.484  -2.292 -0.332 -0.161 ND  VHG 34 
VHG CHA C31 C 0 1 N N N N N N -31.803 2.486  2.501  -0.112 0.001  -1.456 CHA VHG 35 
VHG CGA C32 C 0 1 N N N N N N -28.609 -0.582 1.004  -1.547 -3.933 0.955  CGA VHG 36 
VHG O1A O1  O 0 1 N N N N N N -28.554 -0.766 2.246  -2.534 -4.111 1.847  O1A VHG 37 
VHG O2A O2  O 0 1 N N N N N N -27.583 -0.273 0.343  -1.372 -4.744 0.077  O2A VHG 38 
VHG OB  O3  O 0 1 N N N N N N -32.465 -6.301 2.464  6.765  -1.458 -2.426 OB  VHG 39 
VHG OC  O4  O 0 1 N N N N N N -36.319 3.890  6.616  -8.027 2.327  -0.828 OC  VHG 40 
VHG CGD C33 C 0 1 N N N N N N -28.462 5.182  -0.785 1.376  4.162  0.498  CGD VHG 41 
VHG O1D O5  O 0 1 N N N N N N -29.073 5.067  -1.886 1.186  4.877  -0.458 O1D VHG 42 
VHG O2D O6  O 0 1 N N N N N N -27.197 5.117  -0.764 2.381  4.430  1.347  O2D VHG 43 
VHG H1  H1  H 0 1 N N N N N N -37.667 6.213  5.945  -8.173 -0.485 -0.990 H1  VHG 44 
VHG H2  H2  H 0 1 N N N N N N -30.098 1.322  0.929  -0.133 -2.760 -1.040 H2  VHG 45 
VHG H3  H3  H 0 1 N N N N N N -31.113 0.910  -0.495 0.982  -3.662 0.014  H3  VHG 46 
VHG H4  H4  H 0 1 N N N N N N -34.368 -6.532 5.773  9.486  0.467  0.070  H4  VHG 47 
VHG H5  H5  H 0 1 N N N N N N -35.208 9.044  5.227  -5.716 -2.315 -1.766 H5  VHG 48 
VHG H6  H6  H 0 1 N N N N N N -36.726 8.615  4.368  -4.548 -2.128 -0.437 H6  VHG 49 
VHG H7  H7  H 0 1 N N N N N N -31.036 4.706  -0.470 -0.078 2.791  -1.335 H7  VHG 50 
VHG H8  H8  H 0 1 N N N N N N -30.190 3.493  0.550  -1.171 3.803  -0.361 H8  VHG 51 
VHG H9  H9  H 0 1 N N N N N N -30.491 -1.589 0.683  -0.145 -2.720 2.012  H9  VHG 52 
VHG H10 H10 H 0 1 N N N N N N -29.752 -0.894 -0.800 -1.260 -1.818 0.958  H10 VHG 53 
VHG H11 H11 H 0 1 N N N N N N -32.141 -7.205 6.434  8.894  -1.160 -2.455 H11 VHG 54 
VHG H12 H12 H 0 1 N N N N N N -31.424 -6.046 5.153  10.556 -0.546 -1.854 H12 VHG 55 
VHG H13 H13 H 0 1 N N N N N N -37.148 10.028 6.285  -6.072 -4.038 -0.019 H13 VHG 56 
VHG H14 H14 H 0 1 N N N N N N -37.871 8.398  6.499  -6.304 -2.758 1.196  H14 VHG 57 
VHG H15 H15 H 0 1 N N N N N N -36.353 8.827  7.358  -7.473 -2.945 -0.133 H15 VHG 58 
VHG H16 H16 H 0 1 N N N N N N -28.648 5.172  1.373  -0.007 3.073  1.703  H16 VHG 59 
VHG H17 H17 H 0 1 N N N N N N -29.564 6.481  0.552  1.086  2.061  0.729  H17 VHG 60 
VHG H18 H18 H 0 1 N N N N N N -35.116 -1.589 3.608  4.377  -0.078 2.149  H18 VHG 61 
VHG H19 H19 H 0 1 N N N N N N -35.235 -2.009 1.866  4.153  1.430  1.231  H19 VHG 62 
VHG H20 H20 H 0 1 N N N N N N -33.054 7.621  4.458  -4.333 -1.119 1.438  H20 VHG 63 
VHG H21 H21 H 0 1 N N N N N N -34.250 7.635  3.118  -4.535 0.477  2.200  H21 VHG 64 
VHG H22 H22 H 0 1 N N N N N N -31.569 -2.767 1.024  3.782  -3.125 0.940  H22 VHG 65 
VHG H23 H23 H 0 1 N N N N N N -33.222 -2.651 0.333  3.667  -2.097 2.389  H23 VHG 66 
VHG H24 H24 H 0 1 N N N N N N -31.867 -1.746 -0.424 2.330  -3.194 1.967  H24 VHG 67 
VHG H25 H25 H 0 1 N N N N N N -34.867 -3.909 6.347  7.491  0.449  2.519  H25 VHG 68 
VHG H26 H26 H 0 1 N N N N N N -34.428 -2.267 5.765  8.128  1.688  1.411  H26 VHG 69 
VHG H27 H27 H 0 1 N N N N N N -35.979 -3.016 5.255  6.467  1.821  2.036  H27 VHG 70 
VHG H28 H28 H 0 1 N N N N N N -36.949 5.953  8.323  -6.031 0.630  -2.872 H28 VHG 71 
VHG H29 H29 H 0 1 N N N N N N -35.325 6.603  7.911  -6.942 -0.880 -3.114 H29 VHG 72 
VHG H30 H30 H 0 1 N N N N N N -36.770 7.666  7.810  -7.786 0.687  -3.168 H30 VHG 73 
VHG H31 H31 H 0 1 N N N N N N -32.422 7.654  0.515  -2.880 2.913  2.356  H31 VHG 74 
VHG H32 H32 H 0 1 N N N N N N -31.795 8.281  2.076  -3.020 3.782  0.809  H32 VHG 75 
VHG H33 H33 H 0 1 N N N N N N -30.687 7.451  0.932  -4.351 2.741  1.369  H33 VHG 76 
VHG H34 H34 H 0 1 N N N N N N -34.002 0.829  3.690  2.198  1.390  -0.545 H34 VHG 77 
VHG H35 H35 H 0 1 N N N N N N -34.152 4.346  4.871  -6.021 2.208  0.869  H35 VHG 78 
VHG H36 H36 H 0 1 N N N N N N -33.497 4.085  4.230  -2.403 -1.276 -0.355 H36 VHG 79 
VHG H37 H37 H 0 1 N N N N N N -31.325 2.364  3.484  0.174  0.806  -2.133 H37 VHG 80 
VHG H38 H38 H 0 1 N N N N N N -31.033 2.472  1.715  -0.410 -0.873 -2.035 H38 VHG 81 
VHG H39 H39 H 0 1 N N N N N N -27.662 -0.635 2.547  -3.079 -4.903 1.746  H39 VHG 82 
VHG H40 H40 H 0 1 N N N N N N -26.872 4.981  -1.646 2.925  5.206  1.152  H40 VHG 83 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VHG O1D CGD DOUB N N 1  
VHG CGD O2D SING N N 2  
VHG CGD CBD SING N N 3  
VHG CBA CAA SING N N 4  
VHG CBA CGA SING N N 5  
VHG O2A CGA DOUB N N 6  
VHG CAA C2A SING N N 7  
VHG CAD CBD SING N N 8  
VHG CAD C3D SING N N 9  
VHG CMA C3A SING N N 10 
VHG CGA O1A SING N N 11 
VHG CMD C2D SING N N 12 
VHG C2A C3A SING Y N 13 
VHG C2A C1A DOUB Y N 14 
VHG C3A C4A DOUB Y N 15 
VHG C3D C2D SING Y N 16 
VHG C3D C4D DOUB Y N 17 
VHG C2D C1D DOUB Y N 18 
VHG NB  C4B SING N N 19 
VHG NB  C1B DOUB N N 20 
VHG C1A CHA SING N N 21 
VHG C1A NA  SING Y N 22 
VHG C4A CHB SING N N 23 
VHG C4A NA  SING Y N 24 
VHG OB  C4B DOUB N N 25 
VHG CHA C4D SING N N 26 
VHG C4D ND  SING Y N 27 
VHG CHB C1B SING N N 28 
VHG C4B C3B SING N N 29 
VHG C1B C2B SING N N 30 
VHG C1D ND  SING Y N 31 
VHG C1D CHD SING N N 32 
VHG CHD C4C SING N N 33 
VHG C3B C2B DOUB N N 34 
VHG C3B CAB SING N N 35 
VHG C2B CMB SING N N 36 
VHG C4C NC  SING N N 37 
VHG C4C C3C DOUB N N 38 
VHG NC  C1C SING N N 39 
VHG CAC C3C SING N N 40 
VHG CAC CBC SING N N 41 
VHG CAB CBB DOUB N N 42 
VHG C3C C2C SING N N 43 
VHG C1C C2C SING N N 44 
VHG C1C OC  DOUB N N 45 
VHG C2C CMC SING N N 46 
VHG C2C H1  SING N N 47 
VHG CAA H2  SING N N 48 
VHG CAA H3  SING N N 49 
VHG CAB H4  SING N N 50 
VHG CAC H5  SING N N 51 
VHG CAC H6  SING N N 52 
VHG CAD H7  SING N N 53 
VHG CAD H8  SING N N 54 
VHG CBA H9  SING N N 55 
VHG CBA H10 SING N N 56 
VHG CBB H11 SING N N 57 
VHG CBB H12 SING N N 58 
VHG CBC H13 SING N N 59 
VHG CBC H14 SING N N 60 
VHG CBC H15 SING N N 61 
VHG CBD H16 SING N N 62 
VHG CBD H17 SING N N 63 
VHG CHB H18 SING N N 64 
VHG CHB H19 SING N N 65 
VHG CHD H20 SING N N 66 
VHG CHD H21 SING N N 67 
VHG CMA H22 SING N N 68 
VHG CMA H23 SING N N 69 
VHG CMA H24 SING N N 70 
VHG CMB H25 SING N N 71 
VHG CMB H26 SING N N 72 
VHG CMB H27 SING N N 73 
VHG CMC H28 SING N N 74 
VHG CMC H29 SING N N 75 
VHG CMC H30 SING N N 76 
VHG CMD H31 SING N N 77 
VHG CMD H32 SING N N 78 
VHG CMD H33 SING N N 79 
VHG NA  H34 SING N N 80 
VHG NC  H35 SING N N 81 
VHG ND  H36 SING N N 82 
VHG CHA H37 SING N N 83 
VHG CHA H38 SING N N 84 
VHG O1A H39 SING N N 85 
VHG O2D H40 SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VHG InChI            InChI                1.03  "InChI=1S/C33H40N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h8,19,34-35H,2,7,9-15H2,1,3-6H3,(H,37,42)(H,38,39)(H,40,41)/t19-/m0/s1" 
VHG InChIKey         InChI                1.03  HLNBFSQHDRNIJH-IBGZPJMESA-N                                                                                                                                                                                                       
VHG SMILES_CANONICAL CACTVS               3.385 "CCC1=C(Cc2[nH]c(Cc3[nH]c(CC4=NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C)NC(=O)[C@H]1C"                                                                                                                                       
VHG SMILES           CACTVS               3.385 "CCC1=C(Cc2[nH]c(Cc3[nH]c(CC4=NC(=O)C(=C4C)C=C)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C)NC(=O)[CH]1C"                                                                                                                                        
VHG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=C(NC(=O)[C@H]1C)Cc2c(c(c([nH]2)Cc3c(c(c([nH]3)CC4=NC(=O)C(=C4C)C=C)C)CCC(=O)O)CCC(=O)O)C"                                                                                                                                   
VHG SMILES           "OpenEye OEToolkits" 2.0.7 "CCC1=C(NC(=O)C1C)Cc2c(c(c([nH]2)Cc3c(c(c([nH]3)CC4=NC(=O)C(=C4C)C=C)C)CCC(=O)O)CCC(=O)O)C"                                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           VHG 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-5-[[(3~{S})-4-ethyl-3-methyl-2-oxidanylidene-1,3-dihydropyrrol-5-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VHG "Create component" 2020-08-12 RCSB 
VHG "Initial release"  2021-10-06 RCSB 
VHG "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VHG 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CBC 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
