data_SJG
#

_chem_comp.id                                   SJG
_chem_comp.name                                 "ethyl ~{N}-[6-methyl-5-[3-[2-[[(3~{S})-piperidin-3-yl]amino]pyrimidin-4-yl]pyridin-2-yl]oxy-naphthalen-1-yl]carbamate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H30 N6 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-03-10
_chem_comp.pdbx_modified_date                   2020-12-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       498.576
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SJG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6W39
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SJG  C4   C1   C  0  1  N  N  N  109.671  39.394  29.695   -6.143   1.270   0.450  C4   SJG   1  
SJG  C14  C2   C  0  1  Y  N  N  109.464  43.678  30.687   -2.172  -0.531  -2.875  C14  SJG   2  
SJG  C11  C3   C  0  1  Y  N  N  107.652  43.322  28.621   -1.644  -0.256  -0.162  C11  SJG   3  
SJG  C7   C4   C  0  1  Y  N  N  108.589  41.096  28.218   -3.841   0.758   0.153  C7   SJG   4  
SJG  C8   C5   C  0  1  Y  N  N  107.680  40.952  27.191   -3.560   0.891   1.495  C8   SJG   5  
SJG  C9   C6   C  0  1  Y  N  N  106.763  41.959  26.878   -2.346   0.452   2.015  C9   SJG   6  
SJG  C10  C7   C  0  1  Y  N  N  106.734  43.129  27.575   -1.398  -0.107   1.212  C10  SJG   7  
SJG  C12  C8   C  0  1  Y  N  N  108.582  42.302  28.945   -2.879   0.178  -0.702  C12  SJG   8  
SJG  C13  C9   C  0  1  Y  N  N  109.486  42.514  29.989   -3.123   0.028  -2.077  C13  SJG   9  
SJG  C1   C10  C  0  1  N  N  N  111.521  36.376  30.711   -9.626   2.460   0.212  C1   SJG  10  
SJG  C2   C11  C  0  1  N  N  N  110.652  37.622  30.939   -8.414   1.839   0.910  C2   SJG  11  
SJG  O3   O1   O  0  1  N  N  N  110.609  38.431  29.727   -7.294   1.793  -0.012  O3   SJG  12  
SJG  O5   O2   O  0  1  N  N  N  109.021  39.594  30.724   -6.075   0.863   1.593  O5   SJG  13  
SJG  N6   N1   N  0  1  N  N  N  109.494  40.055  28.516   -5.066   1.192  -0.357  N6   SJG  14  
SJG  C15  C12  C  0  1  Y  N  N  108.550  44.680  30.393   -0.958  -0.964  -2.350  C15  SJG  15  
SJG  C16  C13  C  0  1  Y  N  N  107.655  44.521  29.368   -0.684  -0.836  -1.018  C16  SJG  16  
SJG  O17  O3   O  0  1  N  N  N  106.702  45.436  29.056    0.508  -1.258  -0.521  O17  SJG  17  
SJG  C18  C14  C  0  1  Y  N  N  106.919  46.726  28.804    0.596  -2.538  -0.083  C18  SJG  18  
SJG  C19  C15  C  0  1  Y  N  N  105.885  47.658  29.026    1.808  -3.013   0.437  C19  SJG  19  
SJG  C20  C16  C  0  1  Y  N  N  106.177  48.989  28.725    1.878  -4.334   0.883  C20  SJG  20  
SJG  C21  C17  C  0  1  Y  N  N  107.442  49.318  28.246    0.741  -5.121   0.791  C21  SJG  21  
SJG  C22  C18  C  0  1  Y  N  N  108.393  48.338  28.061   -0.418  -4.581   0.267  C22  SJG  22  
SJG  N23  N2   N  0  1  Y  N  N  108.098  47.082  28.341   -0.462  -3.328  -0.143  N23  SJG  23  
SJG  C24  C19  C  0  1  Y  N  N  104.515  47.321  29.532    2.994  -2.129   0.511  C24  SJG  24  
SJG  C25  C20  C  0  1  Y  N  N  104.056  46.000  29.749    4.202  -2.604   1.030  C25  SJG  25  
SJG  C26  C21  C  0  1  Y  N  N  102.765  45.784  30.214    5.283  -1.742   1.079  C26  SJG  26  
SJG  N27  N3   N  0  1  Y  N  N  101.979  46.840  30.424    5.143  -0.502   0.637  N27  SJG  27  
SJG  C28  C22  C  0  1  Y  N  N  102.428  48.085  30.226    3.986  -0.078   0.150  C28  SJG  28  
SJG  N29  N4   N  0  1  Y  N  N  103.674  48.328  29.791    2.928  -0.871   0.080  N29  SJG  29  
SJG  N30  N5   N  0  1  N  N  N  101.579  49.163  30.480    3.882   1.226  -0.301  N30  SJG  30  
SJG  C31  C23  C  0  1  N  N  S  102.005  50.562  30.273    5.042   2.118  -0.237  C31  SJG  31  
SJG  C33  C24  C  0  1  N  N  N  100.765  51.443  30.110    4.902   3.216  -1.295  C33  SJG  32  
SJG  C34  C25  C  0  1  N  N  N  101.221  52.894  29.929    6.088   4.178  -1.182  C34  SJG  33  
SJG  C35  C26  C  0  1  N  N  N  101.954  53.294  31.209    6.133   4.760   0.233  C35  SJG  34  
SJG  N36  N6   N  0  1  N  N  N  103.148  52.451  31.368    6.268   3.670   1.208  N36  SJG  35  
SJG  C37  C27  C  0  1  N  N  N  102.803  51.027  31.489    5.117   2.760   1.150  C37  SJG  36  
SJG  C38  C28  C  0  1  N  N  N  108.605  45.931  31.240    0.068  -1.584  -3.264  C38  SJG  37  
SJG  H1   H1   H  0  1  N  N  N  110.173  43.827  31.488   -2.365  -0.644  -3.932  H1   SJG  38  
SJG  H2   H2   H  0  1  N  N  N  107.677  40.039  26.615   -4.293   1.334   2.153  H2   SJG  39  
SJG  H3   H3   H  0  1  N  N  N  106.064  41.807  26.069   -2.147   0.566   3.070  H3   SJG  40  
SJG  H4   H4   H  0  1  N  N  N  106.016  43.897  27.327   -0.459  -0.436   1.632  H4   SJG  41  
SJG  H5   H5   H  0  1  N  N  N  110.205  41.749  30.242   -4.061   0.356  -2.499  H5   SJG  42  
SJG  H6   H6   H  0  1  N  N  N  111.547  35.773  31.631   -9.379   3.471  -0.111  H6   SJG  43  
SJG  H7   H7   H  0  1  N  N  N  111.096  35.777  29.892   -9.894   1.856  -0.655  H7   SJG  44  
SJG  H8   H8   H  0  1  N  N  N  112.543  36.685  30.447  -10.466   2.494   0.905  H8   SJG  45  
SJG  H9   H9   H  0  1  N  N  N  111.078  38.218  31.759   -8.146   2.442   1.778  H9   SJG  46  
SJG  H10  H10  H  0  1  N  N  N  109.631  37.310  31.205   -8.661   0.827   1.234  H10  SJG  47  
SJG  H11  H11  H  0  1  N  N  N  110.083  39.764  27.763   -5.142   1.439  -1.292  H11  SJG  48  
SJG  H12  H12  H  0  1  N  N  N  105.429  49.756  28.862    2.795  -4.734   1.289  H12  SJG  49  
SJG  H13  H13  H  0  1  N  N  N  107.679  50.347  28.018    0.760  -6.147   1.127  H13  SJG  50  
SJG  H14  H14  H  0  1  N  N  N  109.374  48.596  27.689   -1.305  -5.194   0.196  H14  SJG  51  
SJG  H15  H15  H  0  1  N  N  N  104.708  45.162  29.553    4.290  -3.621   1.384  H15  SJG  52  
SJG  H16  H16  H  0  1  N  N  N  102.406  44.783  30.401    6.231  -2.077   1.474  H16  SJG  53  
SJG  H17  H17  H  0  1  N  N  N  100.774  49.027  29.902    3.040   1.550  -0.660  H17  SJG  54  
SJG  H32  H18  H  0  1  N  N  N  102.631  50.639  29.372    5.951   1.547  -0.424  H32  SJG  55  
SJG  H18  H19  H  0  1  N  N  N  100.132  51.362  31.006    4.891   2.766  -2.288  H18  SJG  56  
SJG  H19  H20  H  0  1  N  N  N  100.194  51.120  29.227    3.972   3.762  -1.133  H19  SJG  57  
SJG  H20  H21  H  0  1  N  N  N  101.898  52.972  29.066    7.014   3.639  -1.383  H20  SJG  58  
SJG  H21  H22  H  0  1  N  N  N  100.350  53.547  29.772    5.972   4.986  -1.904  H21  SJG  59  
SJG  H22  H23  H  0  1  N  N  N  102.255  54.350  31.145    6.985   5.434   0.321  H22  SJG  60  
SJG  H23  H24  H  0  1  N  N  N  101.288  53.154  32.073    5.212   5.310   0.429  H23  SJG  61  
SJG  H24  H25  H  0  1  N  N  N  103.739  52.574  30.570    7.133   3.169   1.072  H24  SJG  62  
SJG  H26  H27  H  0  1  N  N  N  102.199  50.877  32.396    4.202   3.319   1.342  H26  SJG  63  
SJG  H27  H28  H  0  1  N  N  N  103.728  50.436  31.562    5.232   1.982   1.904  H27  SJG  64  
SJG  H28  H29  H  0  1  N  N  N  107.940  45.816  32.109    0.722  -0.805  -3.657  H28  SJG  65  
SJG  H29  H30  H  0  1  N  N  N  109.636  46.094  31.587    0.661  -2.308  -2.705  H29  SJG  66  
SJG  H30  H31  H  0  1  N  N  N  108.279  46.794  30.641   -0.436  -2.086  -4.089  H30  SJG  67  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SJG  C9   C8   DOUB  Y  N   1  
SJG  C9   C10  SING  Y  N   2  
SJG  C8   C7   SING  Y  N   3  
SJG  C10  C11  DOUB  Y  N   4  
SJG  C22  C21  DOUB  Y  N   5  
SJG  C22  N23  SING  Y  N   6  
SJG  C7   N6   SING  N  N   7  
SJG  C7   C12  DOUB  Y  N   8  
SJG  C21  C20  SING  Y  N   9  
SJG  N23  C18  DOUB  Y  N  10  
SJG  N6   C4   SING  N  N  11  
SJG  C11  C12  SING  Y  N  12  
SJG  C11  C16  SING  Y  N  13  
SJG  C20  C19  DOUB  Y  N  14  
SJG  C18  C19  SING  Y  N  15  
SJG  C18  O17  SING  N  N  16  
SJG  C12  C13  SING  Y  N  17  
SJG  C19  C24  SING  N  N  18  
SJG  O17  C16  SING  N  N  19  
SJG  C16  C15  DOUB  Y  N  20  
SJG  C24  C25  DOUB  Y  N  21  
SJG  C24  N29  SING  Y  N  22  
SJG  C4   O3   SING  N  N  23  
SJG  C4   O5   DOUB  N  N  24  
SJG  O3   C2   SING  N  N  25  
SJG  C25  C26  SING  Y  N  26  
SJG  N29  C28  DOUB  Y  N  27  
SJG  C34  C33  SING  N  N  28  
SJG  C34  C35  SING  N  N  29  
SJG  C13  C14  DOUB  Y  N  30  
SJG  C33  C31  SING  N  N  31  
SJG  C26  N27  DOUB  Y  N  32  
SJG  C28  N27  SING  Y  N  33  
SJG  C28  N30  SING  N  N  34  
SJG  C31  N30  SING  N  N  35  
SJG  C31  C37  SING  N  N  36  
SJG  C15  C14  SING  Y  N  37  
SJG  C15  C38  SING  N  N  38  
SJG  C1   C2   SING  N  N  39  
SJG  C35  N36  SING  N  N  40  
SJG  N36  C37  SING  N  N  41  
SJG  C14  H1   SING  N  N  42  
SJG  C8   H2   SING  N  N  43  
SJG  C9   H3   SING  N  N  44  
SJG  C10  H4   SING  N  N  45  
SJG  C13  H5   SING  N  N  46  
SJG  C1   H6   SING  N  N  47  
SJG  C1   H7   SING  N  N  48  
SJG  C1   H8   SING  N  N  49  
SJG  C2   H9   SING  N  N  50  
SJG  C2   H10  SING  N  N  51  
SJG  N6   H11  SING  N  N  52  
SJG  C20  H12  SING  N  N  53  
SJG  C21  H13  SING  N  N  54  
SJG  C22  H14  SING  N  N  55  
SJG  C25  H15  SING  N  N  56  
SJG  C26  H16  SING  N  N  57  
SJG  N30  H17  SING  N  N  58  
SJG  C31  H32  SING  N  N  59  
SJG  C33  H18  SING  N  N  60  
SJG  C33  H19  SING  N  N  61  
SJG  C34  H20  SING  N  N  62  
SJG  C34  H21  SING  N  N  63  
SJG  C35  H22  SING  N  N  64  
SJG  C35  H23  SING  N  N  65  
SJG  N36  H24  SING  N  N  66  
SJG  C37  H26  SING  N  N  67  
SJG  C37  H27  SING  N  N  68  
SJG  C38  H28  SING  N  N  69  
SJG  C38  H29  SING  N  N  70  
SJG  C38  H30  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SJG  InChI             InChI                 1.03   "InChI=1S/C28H30N6O3/c1-3-36-28(35)34-23-10-4-8-21-20(23)12-11-18(2)25(21)37-26-22(9-6-15-30-26)24-13-16-31-27(33-24)32-19-7-5-14-29-17-19/h4,6,8-13,15-16,19,29H,3,5,7,14,17H2,1-2H3,(H,34,35)(H,31,32,33)/t19-/m0/s1"  
SJG  InChIKey          InChI                 1.03   FAXJSCJHZCBHCM-IBGZPJMESA-N  
SJG  SMILES_CANONICAL  CACTVS                3.385  "CCOC(=O)Nc1cccc2c(Oc3ncccc3c4ccnc(N[C@H]5CCCNC5)n4)c(C)ccc12"  
SJG  SMILES            CACTVS                3.385  "CCOC(=O)Nc1cccc2c(Oc3ncccc3c4ccnc(N[CH]5CCCNC5)n4)c(C)ccc12"  
SJG  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCOC(=O)Nc1cccc2c1ccc(c2Oc3c(cccn3)c4ccnc(n4)N[C@H]5CCCNC5)C"  
SJG  SMILES            "OpenEye OEToolkits"  2.0.7  "CCOC(=O)Nc1cccc2c1ccc(c2Oc3c(cccn3)c4ccnc(n4)NC5CCCNC5)C"  
#
_pdbx_chem_comp_identifier.comp_id          SJG
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "ethyl ~{N}-[6-methyl-5-[3-[2-[[(3~{S})-piperidin-3-yl]amino]pyrimidin-4-yl]pyridin-2-yl]oxy-naphthalen-1-yl]carbamate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SJG  "Create component"  2020-03-10  RCSB  
SJG  "Initial release"   2020-12-09  RCSB  
##
