data_RMG
#

_chem_comp.id                                   RMG
_chem_comp.name                                 "2-{[3-(piperidin-1-yl)propyl]sulfanyl}-6,7,8,9-tetrahydro-5H-cyclohepta[4,5]thieno[2,3-d]pyrimidin-4-amine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H28 N4 S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-17
_chem_comp.pdbx_modified_date                   2020-05-29
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       376.582
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RMG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VV2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RMG  C10  C1   C  0  1  N  N  N  18.503  -10.889  43.908  -6.504   0.317   0.904  C10  RMG   1  
RMG  C11  C2   C  0  1  N  N  N  18.840  -12.211  44.642  -7.949   0.789   0.733  C11  RMG   2  
RMG  C12  C3   C  0  1  N  N  N  20.108  -12.214  45.348  -8.853  -0.424   0.496  C12  RMG   3  
RMG  C13  C4   C  0  1  N  N  N  21.185  -11.692  44.543  -8.358  -1.186  -0.737  C13  RMG   4  
RMG  C14  C5   C  0  1  N  N  N  20.855  -10.343  43.877  -6.901  -1.602  -0.522  C14  RMG   5  
RMG  N01  N1   N  0  1  N  N  N  22.658  -11.896  37.436   1.732  -2.281   0.091  N01  RMG   6  
RMG  C02  C6   C  0  1  Y  N  N  21.468  -11.165  37.095   1.609  -0.905   0.028  C02  RMG   7  
RMG  N03  N2   N  0  1  Y  N  N  21.105  -10.103  37.799   0.414  -0.339  -0.043  N03  RMG   8  
RMG  C04  C7   C  0  1  Y  N  N  20.026   -9.367  37.525   0.282   0.981  -0.103  C04  RMG   9  
RMG  S05  S1   S  0  1  N  N  N  19.710   -7.911  38.625  -1.335   1.674  -0.197  S05  RMG  10  
RMG  C06  C8   C  0  1  N  N  N  20.205   -8.155  40.398  -2.328   0.161  -0.174  C06  RMG  11  
RMG  C07  C9   C  0  1  N  N  N  19.230   -9.118  41.143  -3.812   0.524  -0.249  C07  RMG  12  
RMG  C08  C10  C  0  1  N  N  N  19.341   -9.189  42.708  -4.652  -0.755  -0.229  C08  RMG  13  
RMG  N09  N3   N  0  1  N  N  N  19.601  -10.316  43.145  -6.077  -0.406  -0.301  N09  RMG  14  
RMG  N15  N4   N  0  1  Y  N  N  19.239   -9.689  36.488   1.326   1.789  -0.095  N15  RMG  15  
RMG  C16  C11  C  0  1  Y  N  N  19.529  -10.784  35.712   2.573   1.301  -0.024  C16  RMG  16  
RMG  C17  C12  C  0  1  Y  N  N  20.666  -11.554  36.002   2.761  -0.075   0.045  C17  RMG  17  
RMG  C18  C13  C  0  1  Y  N  N  20.901  -12.761  35.057   4.172  -0.451   0.116  C18  RMG  18  
RMG  C19  C14  C  0  1  Y  N  N  19.859  -12.808  34.080   5.005   0.588   0.105  C19  RMG  19  
RMG  C20  C15  C  0  1  N  N  N  19.697  -13.864  32.952   6.516   0.493   0.186  C20  RMG  20  
RMG  C21  C16  C  0  1  N  N  N  20.930  -14.129  32.100   7.033  -0.542  -0.810  C21  RMG  21  
RMG  C22  C17  C  0  1  N  N  N  21.974  -14.911  32.869   7.090  -1.907  -0.130  C22  RMG  22  
RMG  C23  C18  C  0  1  N  N  N  22.754  -14.006  33.799   5.952  -2.023   0.883  C23  RMG  23  
RMG  C24  C19  C  0  1  N  N  N  22.057  -13.781  35.128   4.613  -1.905   0.191  C24  RMG  24  
RMG  S25  S2   S  0  1  Y  N  N  18.799  -11.514  34.363   4.129   2.110   0.013  S25  RMG  25  
RMG  H1   H1   H  0  1  N  N  N  18.188  -10.151  44.660  -5.855   1.179   1.059  H1   RMG  26  
RMG  H2   H2   H  0  1  N  N  N  17.671  -11.085  43.215  -6.438  -0.346   1.767  H2   RMG  27  
RMG  H3   H3   H  0  1  N  N  N  18.042  -12.409  45.373  -8.270   1.312   1.634  H3   RMG  28  
RMG  H4   H4   H  0  1  N  N  N  18.863  -13.019  43.896  -8.012   1.463  -0.122  H4   RMG  29  
RMG  H5   H5   H  0  1  N  N  N  20.350  -13.248  45.635  -8.820  -1.079   1.367  H5   RMG  30  
RMG  H6   H6   H  0  1  N  N  N  20.011  -11.595  46.252  -9.877  -0.089   0.331  H6   RMG  31  
RMG  H7   H7   H  0  1  N  N  N  21.416  -12.423  43.754  -8.972  -2.075  -0.886  H7   RMG  32  
RMG  H8   H8   H  0  1  N  N  N  22.067  -11.556  45.187  -8.429  -0.544  -1.614  H8   RMG  33  
RMG  H9   H9   H  0  1  N  N  N  21.666  -10.100  43.175  -6.833  -2.255   0.347  H9   RMG  34  
RMG  H10  H10  H  0  1  N  N  N  20.809   -9.575  44.663  -6.541  -2.132  -1.404  H10  RMG  35  
RMG  H11  H11  H  0  1  N  N  N  23.095  -11.471  38.229   2.555  -2.707  -0.195  H11  RMG  36  
RMG  H12  H12  H  0  1  N  N  N  22.417  -12.841  37.655   0.996  -2.819   0.422  H12  RMG  37  
RMG  H13  H13  H  0  1  N  N  N  21.219   -8.580  40.430  -2.063  -0.461  -1.029  H13  RMG  38  
RMG  H14  H14  H  0  1  N  N  N  20.200   -7.180  40.907  -2.134  -0.387   0.748  H14  RMG  39  
RMG  H15  H15  H  0  1  N  N  N  18.205   -8.803  40.899  -4.078   1.146   0.606  H15  RMG  40  
RMG  H16  H16  H  0  1  N  N  N  19.405  -10.132  40.753  -4.007   1.072  -1.171  H16  RMG  41  
RMG  H17  H17  H  0  1  N  N  N  20.137   -8.502  43.029  -4.386  -1.377  -1.084  H17  RMG  42  
RMG  H18  H18  H  0  1  N  N  N  18.382   -8.865  43.137  -4.458  -1.303   0.693  H18  RMG  43  
RMG  H20  H20  H  0  1  N  N  N  18.894  -13.521  32.283   6.952   1.465  -0.044  H20  RMG  44  
RMG  H21  H21  H  0  1  N  N  N  19.402  -14.814  33.421   6.806   0.197   1.194  H21  RMG  45  
RMG  H22  H22  H  0  1  N  N  N  21.362  -13.167  31.786   6.362  -0.590  -1.668  H22  RMG  46  
RMG  H23  H23  H  0  1  N  N  N  20.634  -14.705  31.211   8.032  -0.260  -1.144  H23  RMG  47  
RMG  H24  H24  H  0  1  N  N  N  21.474  -15.691  33.462   6.989  -2.691  -0.880  H24  RMG  48  
RMG  H25  H25  H  0  1  N  N  N  22.669  -15.380  32.157   8.045  -2.017   0.384  H25  RMG  49  
RMG  H26  H26  H  0  1  N  N  N  23.736  -14.463  33.991   6.011  -2.989   1.385  H26  RMG  50  
RMG  H27  H27  H  0  1  N  N  N  22.893  -13.032  33.306   6.039  -1.225   1.620  H27  RMG  51  
RMG  H28  H28  H  0  1  N  N  N  21.651  -14.743  35.474   3.864  -2.481   0.735  H28  RMG  52  
RMG  H29  H29  H  0  1  N  N  N  22.800  -13.415  35.852   4.710  -2.306  -0.818  H29  RMG  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RMG  C21  C22  SING  N  N   1  
RMG  C21  C20  SING  N  N   2  
RMG  C22  C23  SING  N  N   3  
RMG  C20  C19  SING  N  N   4  
RMG  C23  C24  SING  N  N   5  
RMG  C19  S25  SING  Y  N   6  
RMG  C19  C18  DOUB  Y  N   7  
RMG  S25  C16  SING  Y  N   8  
RMG  C18  C24  SING  N  N   9  
RMG  C18  C17  SING  Y  N  10  
RMG  C16  C17  DOUB  Y  N  11  
RMG  C16  N15  SING  Y  N  12  
RMG  C17  C02  SING  Y  N  13  
RMG  N15  C04  DOUB  Y  N  14  
RMG  C02  N01  SING  N  N  15  
RMG  C02  N03  DOUB  Y  N  16  
RMG  C04  N03  SING  Y  N  17  
RMG  C04  S05  SING  N  N  18  
RMG  S05  C06  SING  N  N  19  
RMG  C06  C07  SING  N  N  20  
RMG  C07  C08  SING  N  N  21  
RMG  C08  N09  SING  N  N  22  
RMG  N09  C14  SING  N  N  23  
RMG  N09  C10  SING  N  N  24  
RMG  C14  C13  SING  N  N  25  
RMG  C10  C11  SING  N  N  26  
RMG  C13  C12  SING  N  N  27  
RMG  C11  C12  SING  N  N  28  
RMG  C10  H1   SING  N  N  29  
RMG  C10  H2   SING  N  N  30  
RMG  C11  H3   SING  N  N  31  
RMG  C11  H4   SING  N  N  32  
RMG  C12  H5   SING  N  N  33  
RMG  C12  H6   SING  N  N  34  
RMG  C13  H7   SING  N  N  35  
RMG  C13  H8   SING  N  N  36  
RMG  C14  H9   SING  N  N  37  
RMG  C14  H10  SING  N  N  38  
RMG  N01  H11  SING  N  N  39  
RMG  N01  H12  SING  N  N  40  
RMG  C06  H13  SING  N  N  41  
RMG  C06  H14  SING  N  N  42  
RMG  C07  H15  SING  N  N  43  
RMG  C07  H16  SING  N  N  44  
RMG  C08  H17  SING  N  N  45  
RMG  C08  H18  SING  N  N  46  
RMG  C20  H20  SING  N  N  47  
RMG  C20  H21  SING  N  N  48  
RMG  C21  H22  SING  N  N  49  
RMG  C21  H23  SING  N  N  50  
RMG  C22  H24  SING  N  N  51  
RMG  C22  H25  SING  N  N  52  
RMG  C23  H26  SING  N  N  53  
RMG  C23  H27  SING  N  N  54  
RMG  C24  H28  SING  N  N  55  
RMG  C24  H29  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RMG  SMILES            ACDLabs               12.01  "C1CCCCN1CCCSc2nc(N)c3c(n2)sc4c3CCCCC4"  
RMG  InChI             InChI                 1.03   "InChI=1S/C19H28N4S2/c20-17-16-14-8-3-1-4-9-15(14)25-18(16)22-19(21-17)24-13-7-12-23-10-5-2-6-11-23/h1-13H2,(H2,20,21,22)"  
RMG  InChIKey          InChI                 1.03   VTSCBVXWAWVRQU-UHFFFAOYSA-N  
RMG  SMILES_CANONICAL  CACTVS                3.385  "Nc1nc(SCCCN2CCCCC2)nc3sc4CCCCCc4c13"  
RMG  SMILES            CACTVS                3.385  "Nc1nc(SCCCN2CCCCC2)nc3sc4CCCCCc4c13"  
RMG  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1CCc2c(sc3c2c(nc(n3)SCCCN4CCCCC4)N)CC1"  
RMG  SMILES            "OpenEye OEToolkits"  2.0.7  "C1CCc2c(sc3c2c(nc(n3)SCCCN4CCCCC4)N)CC1"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RMG  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-{[3-(piperidin-1-yl)propyl]sulfanyl}-6,7,8,9-tetrahydro-5H-cyclohepta[4,5]thieno[2,3-d]pyrimidin-4-amine"  
RMG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-(3-piperidin-1-ylpropylsulfanyl)-8-thia-4,6-diazatricyclo[7.5.0.0^{2,7}]tetradeca-1(9),2(7),3,5-tetraen-3-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RMG  "Create component"  2020-02-17  RCSB  
RMG  "Initial release"   2020-06-03  RCSB  
##
