data_PZG
# 
_chem_comp.id                                    PZG 
_chem_comp.name                                  "[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid" 
_chem_comp.type                                  "DNA linking" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C14 H18 N7 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               DG 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-01-05 
_chem_comp.pdbx_modified_date                    2016-12-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        427.309 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PZG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5HBW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PZG O1  O6  O 0 1 N N N 10.938 -8.816  5.799  6.147  2.711  1.181  O1  PZG 1  
PZG C1  C6  C 0 1 N N N 11.175 -8.855  4.617  5.643  1.852  0.479  C1  PZG 2  
PZG N1  N1  N 0 1 N N N 12.473 -8.544  4.284  6.335  1.298  -0.542 N1  PZG 3  
PZG C2  C2  C 0 1 N N N 12.876 -8.661  2.966  5.761  0.337  -1.320 C2  PZG 4  
PZG N2  N2  N 0 1 N N N 14.109 -8.333  2.700  6.487  -0.207 -2.350 N2  PZG 5  
PZG N3  N3  N 0 1 N N N 12.050 -9.085  2.007  4.534  -0.083 -1.113 N3  PZG 6  
PZG C3  C4  C 0 1 Y N N 10.761 -9.354  2.347  3.789  0.418  -0.121 C3  PZG 7  
PZG C4  C5  C 0 1 Y N N 10.308 -9.280  3.648  4.323  1.404  0.717  C4  PZG 8  
PZG N4  N7  N 0 1 Y N N 9.041  -9.682  3.655  3.365  1.725  1.621  N4  PZG 9  
PZG C5  C8  C 0 1 Y N N 8.698  -9.956  2.412  2.302  1.012  1.393  C5  PZG 10 
PZG N5  N9  N 0 1 Y N N 9.757  -9.738  1.604  2.517  0.186  0.329  N5  PZG 11 
PZG C6  C1* C 0 1 N N R 9.782  -9.948  0.152  1.561  -0.772 -0.232 C6  PZG 12 
PZG O2  O4* O 0 1 N N N 8.518  -10.640 -0.079 0.211  -0.404 0.125  O2  PZG 13 
PZG C7  C2* C 0 1 N N R 10.838 -10.941 -0.308 1.770  -2.169 0.394  C7  PZG 14 
PZG O3  O2* O 0 1 N N N 11.856 -10.254 -1.053 2.555  -2.993 -0.470 O3  PZG 15 
PZG C8  C3* C 0 1 N N S 10.128 -11.757 -1.316 0.340  -2.736 0.535  C8  PZG 16 
PZG O4  O3* O 0 1 N N N 10.376 -11.121 -2.548 0.194  -3.928 -0.239 O4  PZG 17 
PZG C9  C4* C 0 1 N N R 8.673  -11.553 -1.175 -0.565 -1.612 -0.025 C9  PZG 18 
PZG C10 C5* C 0 1 N N N 7.993  -12.920 -1.100 -1.860 -1.518 0.786  C10 PZG 19 
PZG O5  O5* O 0 1 N N N 8.340  -13.561 0.104  -2.729 -0.557 0.184  O5  PZG 20 
PZG P1  P6* P 0 1 N N N 8.153  -15.177 0.482  -4.184 -0.200 0.774  P1  PZG 21 
PZG O6  O7* O 0 1 N N N 7.622  -16.167 -0.672 -4.055 0.206  2.192  O6  PZG 22 
PZG O7  O8* O 0 1 N Y N 7.222  -14.937 1.693  -5.137 -1.493 0.670  O7  PZG 23 
PZG C11 C10 C 0 1 Y N N 10.030 -15.659 0.530  -4.907 1.162  -0.181 C11 PZG 24 
PZG C12 C11 C 0 1 Y N N 10.819 -15.457 -0.537 -4.764 2.482  0.081  C12 PZG 25 
PZG N6  N12 N 0 1 Y N N 12.042 -15.864 -0.199 -5.453 3.165  -0.858 N6  PZG 26 
PZG N7  N13 N 0 1 Y N N 12.024 -16.346 1.079  -6.038 2.234  -1.725 N7  PZG 27 
PZG C13 C14 C 0 1 Y N N 10.767 -16.213 1.528  -5.705 1.034  -1.323 C13 PZG 28 
PZG C14 C15 C 0 1 N N N 10.260 -16.633 2.943  -6.115 -0.262 -1.974 C14 PZG 29 
PZG H1  H1  H 0 1 N N N 13.117 -8.237  4.985  7.243  1.587  -0.722 H1  PZG 30 
PZG H2  H2  H 0 1 N N N 14.452 -8.397  1.763  7.395  0.094  -2.515 H2  PZG 31 
PZG H3  H3  H 0 1 N N N 14.712 -8.018  3.433  6.093  -0.891 -2.913 H3  PZG 32 
PZG H4  H4  H 0 1 N N N 7.726  -10.300 2.092  1.386  1.063  1.964  H4  PZG 33 
PZG H5  H5  H 0 1 N N N 9.850  -9.002  -0.405 1.667  -0.823 -1.316 H5  PZG 34 
PZG H6  H6  H 0 1 N N N 11.233 -11.541 0.525  2.245  -2.082 1.372  H6  PZG 35 
PZG H7  H7  H 0 1 N N N 12.361 -9.703  -0.467 2.717  -3.882 -0.126 H7  PZG 36 
PZG H8  H8  H 0 1 N N N 10.418 -12.818 -1.290 0.107  -2.928 1.582  H8  PZG 37 
PZG H9  H9  H 0 1 N N N 11.301 -11.184 -2.757 0.740  -4.665 0.068  H9  PZG 38 
PZG H10 H10 H 0 1 N N N 8.312  -11.060 -2.090 -0.789 -1.793 -1.076 H10 PZG 39 
PZG H11 H11 H 0 1 N N N 6.902  -12.788 -1.142 -2.350 -2.491 0.802  H11 PZG 40 
PZG H12 H12 H 0 1 N N N 8.320  -13.537 -1.950 -1.628 -1.210 1.805  H12 PZG 41 
PZG H13 H13 H 0 1 N Y N 6.421  -15.435 1.581  -5.267 -1.815 -0.232 H13 PZG 42 
PZG H14 H14 H 0 1 N N N 10.520 -15.043 -1.489 -4.200 2.912  0.896  H14 PZG 43 
PZG H15 H15 H 0 1 N N N 12.848 -15.823 -0.789 -5.529 4.130  -0.920 H15 PZG 44 
PZG H16 H16 H 0 1 N N N 11.094 -17.057 3.521  -7.054 -0.605 -1.539 H16 PZG 45 
PZG H17 H17 H 0 1 N N N 9.863  -15.751 3.467  -6.245 -0.105 -3.044 H17 PZG 46 
PZG H18 H18 H 0 1 N N N 9.465  -17.386 2.839  -5.341 -1.012 -1.808 H18 PZG 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PZG O4  C8  SING N N 1  
PZG C8  C9  SING N N 2  
PZG C8  C7  SING N N 3  
PZG C9  C10 SING N N 4  
PZG C9  O2  SING N N 5  
PZG C10 O5  SING N N 6  
PZG O3  C7  SING N N 7  
PZG O6  P1  DOUB N N 8  
PZG C12 N6  SING Y N 9  
PZG C12 C11 DOUB Y N 10 
PZG C7  C6  SING N N 11 
PZG N6  N7  SING Y N 12 
PZG O2  C6  SING N N 13 
PZG O5  P1  SING N N 14 
PZG C6  N5  SING N N 15 
PZG P1  C11 SING N N 16 
PZG P1  O7  SING N N 17 
PZG C11 C13 SING Y N 18 
PZG N7  C13 DOUB Y N 19 
PZG C13 C14 SING N N 20 
PZG N5  C3  SING Y N 21 
PZG N5  C5  SING Y N 22 
PZG N3  C3  SING N N 23 
PZG N3  C2  DOUB N N 24 
PZG C3  C4  DOUB Y N 25 
PZG C5  N4  DOUB Y N 26 
PZG N2  C2  SING N N 27 
PZG C2  N1  SING N N 28 
PZG C4  N4  SING Y N 29 
PZG C4  C1  SING N N 30 
PZG N1  C1  SING N N 31 
PZG C1  O1  DOUB N N 32 
PZG N1  H1  SING N N 33 
PZG N2  H2  SING N N 34 
PZG N2  H3  SING N N 35 
PZG C5  H4  SING N N 36 
PZG C6  H5  SING N N 37 
PZG C7  H6  SING N N 38 
PZG O3  H7  SING N N 39 
PZG C8  H8  SING N N 40 
PZG O4  H9  SING N N 41 
PZG C9  H10 SING N N 42 
PZG C10 H11 SING N N 43 
PZG C10 H12 SING N N 44 
PZG O7  H13 SING N N 45 
PZG C12 H14 SING N N 46 
PZG N6  H15 SING N N 47 
PZG C14 H16 SING N N 48 
PZG C14 H17 SING N N 49 
PZG C14 H18 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PZG InChI            InChI                1.03  "InChI=1S/C14H18N7O7P/c1-5-7(2-17-20-5)29(25,26)27-3-6-9(22)10(23)13(28-6)21-4-16-8-11(21)18-14(15)19-12(8)24/h2,4,6,9-10,13,22-23H,3H2,1H3,(H,17,20)(H,25,26)(H3,15,18,19,24)/t6-,9-,10-,13-/m1/s1" 
PZG InChIKey         InChI                1.03  KSGRBDIXLOOOHG-ZRFIDHNTSA-N                                                                                                                                                                          
PZG SMILES_CANONICAL CACTVS               3.385 "Cc1n[nH]cc1[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4C(=O)NC(=Nc34)N"                                                                                                                         
PZG SMILES           CACTVS               3.385 "Cc1n[nH]cc1[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4C(=O)NC(=Nc34)N"                                                                                                                              
PZG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "Cc1c(c[nH]n1)P(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3N=C(NC4=O)N)O)O"                                                                                                                        
PZG SMILES           "OpenEye OEToolkits" 2.0.4 "Cc1c(c[nH]n1)P(=O)(O)OCC2C(C(C(O2)n3cnc4c3N=C(NC4=O)N)O)O"                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PZG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PZG "Create component" 2016-01-05 RCSB 
PZG "Initial release"  2016-12-07 RCSB 
# 
