data_N8G
#

_chem_comp.id                                   N8G
_chem_comp.name                                 "[[(2~{S},5~{R})-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C8 H13 F N3 O12 P3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-07
_chem_comp.pdbx_modified_date                   2019-07-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       487.186
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N8G
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OTZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N8G  OAC  O1   O  0  1  N  N  N  49.028  -1.829  -24.079   5.333  -2.909  -0.476  OAC  N8G   1  
N8G  PAZ  P1   P  0  1  N  N  N  47.941  -2.804  -24.550   4.940  -1.912   0.726  PAZ  N8G   2  
N8G  OAF  O2   O  0  1  N  N  N  48.119  -4.188  -24.003   4.663  -2.766   2.062  OAF  N8G   3  
N8G  OAG  O3   O  0  1  N  N  N  47.867  -2.761  -26.077   6.053  -0.966   0.967  OAG  N8G   4  
N8G  OAQ  O4   O  0  1  N  N  N  46.576  -2.162  -24.033   3.614  -1.090   0.330  OAQ  N8G   5  
N8G  PBB  P2   P  0  1  N  N  N  45.121  -1.918  -24.629   3.315   0.139  -0.666  PBB  N8G   6  
N8G  OAI  O5   O  0  1  N  N  N  44.281  -1.367  -23.493   3.205  -0.408  -2.177  OAI  N8G   7  
N8G  OAE  O6   O  0  1  N  N  N  44.584  -3.108  -25.314   4.417   1.124  -0.578  OAE  N8G   8  
N8G  OAR  O7   O  0  1  N  N  N  45.367  -0.719  -25.646   1.930   0.844  -0.249  OAR  N8G   9  
N8G  PBA  P3   P  0  1  N  N  N  45.803   0.802  -25.464   1.237   2.251  -0.612  PBA  N8G  10  
N8G  OAH  O8   O  0  1  N  N  N  46.527   1.296  -26.657   1.349   2.495  -2.068  OAH  N8G  11  
N8G  OAD  O9   O  0  1  N  N  N  46.616   0.875  -24.159   1.977   3.436   0.189  OAD  N8G  12  
N8G  OAO  O10  O  0  1  N  N  N  44.448   1.592  -25.205  -0.317   2.209  -0.193  OAO  N8G  13  
N8G  CAL  C1   C  0  1  N  N  N  43.827   1.973  -23.961  -1.230   3.270  -0.480  CAL  N8G  14  
N8G  CAW  C2   C  0  1  N  N  S  42.360   1.722  -24.212  -2.617   2.907   0.054  CAW  N8G  15  
N8G  OAP  O11  O  0  1  N  N  N  41.795   2.820  -24.961  -3.077   1.648  -0.497  OAP  N8G  16  
N8G  SAS  S1   S  0  1  N  N  N  42.030   0.226  -25.176  -2.553   2.498   1.849  SAS  N8G  17  
N8G  CAM  C3   C  0  1  N  N  N  40.423   0.944  -25.593  -4.002   1.369   1.783  CAM  N8G  18  
N8G  CAX  C4   C  0  1  N  N  R  40.698   2.431  -25.773  -4.127   1.070   0.273  CAX  N8G  19  
N8G  NAY  N1   N  0  1  N  N  N  41.023   2.776  -27.168  -4.113  -0.381   0.077  NAY  N8G  20  
N8G  CAK  C5   C  0  1  N  N  N  42.323   2.986  -27.557  -5.219  -1.011  -0.415  CAK  N8G  21  
N8G  CAU  C6   C  0  1  N  N  N  42.594   3.270  -28.823  -5.193  -2.354  -0.593  CAU  N8G  22  
N8G  FAJ  F1   F  0  1  N  N  N  43.856   3.486  -29.245  -6.273  -3.003  -1.079  FAJ  N8G  23  
N8G  CAV  C7   C  0  1  N  N  N  39.977   2.868  -28.092  -3.007  -1.087   0.377  CAV  N8G  24  
N8G  OAB  O12  O  0  1  N  N  N  38.815   2.728  -27.698  -2.026  -0.507   0.812  OAB  N8G  25  
N8G  NAN  N2   N  0  1  N  N  N  40.276   3.150  -29.389  -2.966  -2.407   0.208  NAN  N8G  26  
N8G  CAT  C8   C  0  1  N  N  N  41.539   3.354  -29.777  -4.018  -3.063  -0.262  CAT  N8G  27  
N8G  NAA  N3   N  0  1  N  N  N  41.796   3.649  -31.055  -3.963  -4.428  -0.432  NAA  N8G  28  
N8G  H1   H1   H  0  1  N  N  N  49.423  -1.407  -24.833   4.648  -3.557  -0.688  H1   N8G  29  
N8G  H2   H2   H  0  1  N  N  N  48.155  -4.810  -24.720   5.421  -3.287   2.360  H2   N8G  30  
N8G  H3   H3   H  0  1  N  N  N  43.499  -1.897  -23.390   2.503  -1.059  -2.308  H3   N8G  31  
N8G  H4   H4   H  0  1  N  N  N  47.476   1.237  -24.341   1.943   3.342   1.150  H4   N8G  32  
N8G  H5   H5   H  0  1  N  N  N  44.196   1.353  -23.131  -0.885   4.186  -0.002  H5   N8G  33  
N8G  H6   H6   H  0  1  N  N  N  44.012   3.034  -23.737  -1.284   3.420  -1.559  H6   N8G  34  
N8G  H7   H7   H  0  1  N  N  N  41.835   1.595  -23.254  -3.332   3.706  -0.142  H7   N8G  35  
N8G  H8   H8   H  0  1  N  N  N  39.702   0.779  -24.779  -3.807   0.455   2.344  H8   N8G  36  
N8G  H9   H9   H  0  1  N  N  N  40.033   0.506  -26.524  -4.897   1.866   2.157  H9   N8G  37  
N8G  H10  H10  H  0  1  N  N  N  39.798   2.987  -25.469  -5.080   1.460  -0.084  H10  N8G  38  
N8G  H11  H11  H  0  1  N  N  N  43.122   2.920  -26.834  -6.106  -0.445  -0.660  H11  N8G  39  
N8G  H12  H12  H  0  1  N  N  N  41.046   3.716  -31.713  -3.153  -4.913  -0.208  H12  N8G  40  
N8G  H13  H13  H  0  1  N  N  N  42.738   3.803  -31.353  -4.734  -4.905  -0.776  H13  N8G  41  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N8G  NAA  CAT  SING  N  N   1  
N8G  CAT  NAN  DOUB  N  N   2  
N8G  CAT  CAU  SING  N  N   3  
N8G  NAN  CAV  SING  N  N   4  
N8G  FAJ  CAU  SING  N  N   5  
N8G  CAU  CAK  DOUB  N  N   6  
N8G  CAV  OAB  DOUB  N  N   7  
N8G  CAV  NAY  SING  N  N   8  
N8G  CAK  NAY  SING  N  N   9  
N8G  NAY  CAX  SING  N  N  10  
N8G  OAH  PBA  DOUB  N  N  11  
N8G  OAG  PAZ  DOUB  N  N  12  
N8G  CAX  CAM  SING  N  N  13  
N8G  CAX  OAP  SING  N  N  14  
N8G  OAR  PBA  SING  N  N  15  
N8G  OAR  PBB  SING  N  N  16  
N8G  CAM  SAS  SING  N  N  17  
N8G  PBA  OAO  SING  N  N  18  
N8G  PBA  OAD  SING  N  N  19  
N8G  OAE  PBB  DOUB  N  N  20  
N8G  OAO  CAL  SING  N  N  21  
N8G  SAS  CAW  SING  N  N  22  
N8G  OAP  CAW  SING  N  N  23  
N8G  PBB  OAQ  SING  N  N  24  
N8G  PBB  OAI  SING  N  N  25  
N8G  PAZ  OAC  SING  N  N  26  
N8G  PAZ  OAQ  SING  N  N  27  
N8G  PAZ  OAF  SING  N  N  28  
N8G  CAW  CAL  SING  N  N  29  
N8G  OAC  H1   SING  N  N  30  
N8G  OAF  H2   SING  N  N  31  
N8G  OAI  H3   SING  N  N  32  
N8G  OAD  H4   SING  N  N  33  
N8G  CAL  H5   SING  N  N  34  
N8G  CAL  H6   SING  N  N  35  
N8G  CAW  H7   SING  N  N  36  
N8G  CAM  H8   SING  N  N  37  
N8G  CAM  H9   SING  N  N  38  
N8G  CAX  H10  SING  N  N  39  
N8G  CAK  H11  SING  N  N  40  
N8G  NAA  H12  SING  N  N  41  
N8G  NAA  H13  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N8G  InChI             InChI                 1.03   "InChI=1S/C8H13FN3O12P3S/c9-4-1-12(8(13)11-7(4)10)5-3-28-6(22-5)2-21-26(17,18)24-27(19,20)23-25(14,15)16/h1,5-6H,2-3H2,(H,17,18)(H,19,20)(H2,10,11,13)(H2,14,15,16)/t5-,6+/m1/s1"  
N8G  InChIKey          InChI                 1.03   WIEOLFZNMKSGEX-RITPCOANSA-N  
N8G  SMILES_CANONICAL  CACTVS                3.385  "NC1=NC(=O)N(C=C1F)[C@H]2CS[C@@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2"  
N8G  SMILES            CACTVS                3.385  "NC1=NC(=O)N(C=C1F)[CH]2CS[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)O2"  
N8G  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1[C@@H](O[C@@H](S1)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)N2C=C(C(=NC2=O)N)F"  
N8G  SMILES            "OpenEye OEToolkits"  2.0.7  "C1C(OC(S1)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)N2C=C(C(=NC2=O)N)F"  
#
_pdbx_chem_comp_identifier.comp_id          N8G
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[[(2~{S},5~{R})-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N8G  "Create component"  2019-05-07  RCSB  
N8G  "Initial release"   2019-07-24  RCSB  
##
