data_N3G
#

_chem_comp.id                                   N3G
_chem_comp.name                                 "N-{[4-(6-amino-9H-purin-9-yl)butyl]sulfamoyl}-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H29 N9 O4 S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-01
_chem_comp.pdbx_modified_date                   2020-06-26
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       511.621
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N3G
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6ORU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N3G  C21  C1   C  0  1  Y  N  N  53.582  22.381  21.838   -6.101   2.736   1.003  C21  N3G   1  
N3G  C24  C2   C  0  1  Y  N  N  50.456  24.189  22.485   -9.162   2.397  -0.781  C24  N3G   2  
N3G  C18  C3   C  0  1  N  N  N  54.493  21.571  18.926   -4.448  -0.163   0.594  C18  N3G   3  
N3G  C19  C4   C  0  1  N  N  N  54.274  22.972  19.434   -5.406   0.397   1.647  C19  N3G   4  
N3G  C23  C5   C  0  1  Y  N  N  51.698  23.545  22.085   -7.954   2.370  -0.062  C23  N3G   5  
N3G  C27  C6   C  0  1  Y  N  N  50.401  25.148  20.325   -9.275   0.098  -0.610  C27  N3G   6  
N3G  C29  C7   C  0  1  Y  N  N  52.181  23.789  20.777   -7.461   1.124   0.360  C29  N3G   7  
N3G  C30  C8   C  0  1  N  N  S  46.821  15.008  23.286    7.146   2.429   0.162  C30  N3G   8  
N3G  C32  C9   C  0  1  N  N  N  48.333  14.286  24.938    8.581   1.372   1.600  C32  N3G   9  
N3G  C01  C10  C  0  1  N  N  R  46.044  14.604  24.599    8.577   2.524  -0.380  C01  N3G  10  
N3G  C02  C11  C  0  1  N  N  N  45.447  15.902  25.140    8.736   1.824  -1.744  C02  N3G  11  
N3G  C04  C12  C  0  1  N  N  S  46.615  16.514  22.951    6.209   1.657  -0.788  C04  N3G  12  
N3G  C05  C13  C  0  1  N  N  N  47.721  17.231  22.124    5.213   0.808   0.005  C05  N3G  13  
N3G  C06  C14  C  0  1  N  N  N  47.784  16.847  20.585    4.220   0.154  -0.959  C06  N3G  14  
N3G  C07  C15  C  0  1  N  N  N  49.157  17.100  19.929    3.224  -0.695  -0.166  C07  N3G  15  
N3G  C08  C16  C  0  1  N  N  N  49.387  16.971  18.335    2.232  -1.349  -1.130  C08  N3G  16  
N3G  C09  C17  C  0  1  N  N  N  49.678  18.344  17.669    1.251  -2.185  -0.349  C09  N3G  17  
N3G  C16  C18  C  0  1  N  N  N  53.332  19.436  18.281   -2.565  -1.755   0.191  C16  N3G  18  
N3G  C17  C19  C  0  1  N  N  N  53.293  20.937  18.270   -3.524  -1.196   1.243  C17  N3G  19  
N3G  N11  N1   N  0  1  N  N  N  50.770  18.807  16.912    0.278  -2.860  -0.993  N11  N3G  20  
N3G  N15  N2   N  0  1  N  N  N  53.313  18.902  16.931   -1.681  -2.744   0.812  N15  N3G  21  
N3G  N20  N3   N  0  1  Y  N  N  53.371  23.065  20.616   -6.291   1.386   1.025  N20  N3G  22  
N3G  N22  N4   N  0  1  Y  N  N  52.603  22.661  22.726   -7.080   3.312   0.368  N22  N3G  23  
N3G  N25  N5   N  0  1  N  N  N  49.849  24.054  23.698   -9.701   3.595  -1.215  N25  N3G  24  
N3G  N26  N6   N  0  1  Y  N  N  49.834  24.997  21.568   -9.773   1.245  -1.035  N26  N3G  25  
N3G  N28  N7   N  0  1  Y  N  N  51.534  24.594  19.881   -8.148   0.024   0.067  N28  N3G  26  
N3G  N31  N8   N  0  1  N  N  N  48.143  14.763  23.648    7.289   1.676   1.418  N31  N3G  27  
N3G  N34  N9   N  0  1  N  N  N  47.060  14.155  25.539    9.386   1.815   0.624  N34  N3G  28  
N3G  O10  O1   O  0  1  N  N  N  48.910  19.244  17.847    1.337  -2.252   0.859  O10  N3G  29  
N3G  O13  O2   O  0  1  N  N  N  51.981  18.054  14.999   -1.707  -4.324  -1.084  O13  N3G  30  
N3G  O14  O3   O  0  1  N  N  N  52.209  16.767  17.012   -0.030  -4.577   0.752  O14  N3G  31  
N3G  O33  O4   O  0  1  N  N  N  49.380  13.990  25.517    8.987   0.750   2.563  O33  N3G  32  
N3G  S03  S1   S  0  1  N  N  N  46.496  17.229  24.610    7.374   0.588  -1.727  S03  N3G  33  
N3G  S12  S2   S  0  1  N  N  N  52.088  18.033  16.389   -0.800  -3.779  -0.135  S12  N3G  34  
N3G  H1   H1   H  0  1  N  N  N  54.415  21.723  22.034   -5.265   3.252   1.451  H1   N3G  35  
N3G  H2   H2   H  0  1  N  N  N  54.789  20.941  19.778   -5.020  -0.637  -0.203  H2   N3G  36  
N3G  H3   H3   H  0  1  N  N  N  55.310  21.599  18.190   -3.850   0.649   0.179  H3   N3G  37  
N3G  H4   H4   H  0  1  N  N  N  55.251  23.393  19.714   -6.004  -0.414   2.062  H4   N3G  38  
N3G  H5   H5   H  0  1  N  N  N  53.837  23.569  18.620   -4.834   0.871   2.444  H5   N3G  39  
N3G  H6   H6   H  0  1  N  N  N  49.873  25.784  19.630   -9.804  -0.816  -0.838  H6   N3G  40  
N3G  H7   H7   H  0  1  N  N  N  46.487  14.382  22.445    6.751   3.425   0.361  H7   N3G  41  
N3G  H8   H8   H  0  1  N  N  N  45.274  13.846  24.394    8.885   3.567  -0.453  H8   N3G  42  
N3G  H9   H9   H  0  1  N  N  N  44.431  16.043  24.742    8.603   2.534  -2.560  H9   N3G  43  
N3G  H10  H10  H  0  1  N  N  N  45.409  15.869  26.239    9.707   1.333  -1.816  H10  N3G  44  
N3G  H11  H11  H  0  1  N  N  N  45.637  16.658  22.469    5.688   2.342  -1.457  H11  N3G  45  
N3G  H12  H12  H  0  1  N  N  N  48.694  16.984  22.574    5.750   0.034   0.553  H12  N3G  46  
N3G  H13  H13  H  0  1  N  N  N  47.548  18.315  22.196    4.673   1.443   0.707  H13  N3G  47  
N3G  H14  H14  H  0  1  N  N  N  47.030  17.442  20.049    3.682   0.928  -1.507  H14  N3G  48  
N3G  H15  H15  H  0  1  N  N  N  47.545  15.778  20.486    4.760  -0.481  -1.661  H15  N3G  49  
N3G  H16  H16  H  0  1  N  N  N  49.856  16.392  20.398    3.762  -1.469   0.382  H16  N3G  50  
N3G  H17  H17  H  0  1  N  N  N  49.441  18.128  20.198    2.684  -0.060   0.536  H17  N3G  51  
N3G  H18  H18  H  0  1  N  N  N  48.482  16.542  17.880    1.694  -0.576  -1.678  H18  N3G  52  
N3G  H19  H19  H  0  1  N  N  N  50.241  16.302  18.154    2.772  -1.984  -1.832  H19  N3G  53  
N3G  H20  H20  H  0  1  N  N  N  52.456  19.058  18.829   -3.138  -2.230  -0.607  H20  N3G  54  
N3G  H21  H21  H  0  1  N  N  N  54.252  19.104  18.785   -1.968  -0.944  -0.225  H21  N3G  55  
N3G  H22  H22  H  0  1  N  N  N  53.246  21.277  17.225   -2.952  -0.721   2.040  H22  N3G  56  
N3G  H23  H23  H  0  1  N  N  N  52.389  21.266  18.803   -4.122  -2.007   1.658  H23  N3G  57  
N3G  H24  H24  H  0  1  N  N  N  50.722  19.773  16.656    0.208  -2.806  -1.959  H24  N3G  58  
N3G  H25  H25  H  0  1  N  N  N  54.126  18.326  16.845   -1.612  -2.794   1.778  H25  N3G  59  
N3G  H26  H26  H  0  1  N  N  N  49.009  24.596  23.713   -9.245   4.430  -1.024  H26  N3G  60  
N3G  H27  H27  H  0  1  N  N  N  49.627  23.092  23.854  -10.535   3.601  -1.710  H27  N3G  61  
N3G  H28  H28  H  0  1  N  N  N  48.905  14.920  23.020    6.565   1.439   2.018  H28  N3G  62  
N3G  H29  H29  H  0  1  N  N  N  46.886  13.810  26.461   10.347   1.690   0.587  H29  N3G  63  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N3G  O13  S12  DOUB  N  N   1  
N3G  S12  N11  SING  N  N   2  
N3G  S12  N15  SING  N  N   3  
N3G  S12  O14  DOUB  N  N   4  
N3G  N11  C09  SING  N  N   5  
N3G  N15  C16  SING  N  N   6  
N3G  C09  O10  DOUB  N  N   7  
N3G  C09  C08  SING  N  N   8  
N3G  C17  C16  SING  N  N   9  
N3G  C17  C18  SING  N  N  10  
N3G  C08  C07  SING  N  N  11  
N3G  C18  C19  SING  N  N  12  
N3G  C19  N20  SING  N  N  13  
N3G  N28  C27  DOUB  Y  N  14  
N3G  N28  C29  SING  Y  N  15  
N3G  C07  C06  SING  N  N  16  
N3G  C27  N26  SING  Y  N  17  
N3G  C06  C05  SING  N  N  18  
N3G  N20  C29  SING  Y  N  19  
N3G  N20  C21  SING  Y  N  20  
N3G  C29  C23  DOUB  Y  N  21  
N3G  N26  C24  DOUB  Y  N  22  
N3G  C21  N22  DOUB  Y  N  23  
N3G  C23  C24  SING  Y  N  24  
N3G  C23  N22  SING  Y  N  25  
N3G  C05  C04  SING  N  N  26  
N3G  C24  N25  SING  N  N  27  
N3G  C04  C30  SING  N  N  28  
N3G  C04  S03  SING  N  N  29  
N3G  C30  N31  SING  N  N  30  
N3G  C30  C01  SING  N  N  31  
N3G  N31  C32  SING  N  N  32  
N3G  C01  C02  SING  N  N  33  
N3G  C01  N34  SING  N  N  34  
N3G  S03  C02  SING  N  N  35  
N3G  C32  O33  DOUB  N  N  36  
N3G  C32  N34  SING  N  N  37  
N3G  C21  H1   SING  N  N  38  
N3G  C18  H2   SING  N  N  39  
N3G  C18  H3   SING  N  N  40  
N3G  C19  H4   SING  N  N  41  
N3G  C19  H5   SING  N  N  42  
N3G  C27  H6   SING  N  N  43  
N3G  C30  H7   SING  N  N  44  
N3G  C01  H8   SING  N  N  45  
N3G  C02  H9   SING  N  N  46  
N3G  C02  H10  SING  N  N  47  
N3G  C04  H11  SING  N  N  48  
N3G  C05  H12  SING  N  N  49  
N3G  C05  H13  SING  N  N  50  
N3G  C06  H14  SING  N  N  51  
N3G  C06  H15  SING  N  N  52  
N3G  C07  H16  SING  N  N  53  
N3G  C07  H17  SING  N  N  54  
N3G  C08  H18  SING  N  N  55  
N3G  C08  H19  SING  N  N  56  
N3G  C16  H20  SING  N  N  57  
N3G  C16  H21  SING  N  N  58  
N3G  C17  H22  SING  N  N  59  
N3G  C17  H23  SING  N  N  60  
N3G  N11  H24  SING  N  N  61  
N3G  N15  H25  SING  N  N  62  
N3G  N25  H26  SING  N  N  63  
N3G  N25  H27  SING  N  N  64  
N3G  N31  H28  SING  N  N  65  
N3G  N34  H29  SING  N  N  66  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N3G  SMILES            ACDLabs               12.01  "c2nc1c(N)ncnc1n2CCCCNS(NC(CCCCC4C3NC(=O)NC3CS4)=O)(=O)=O"  
N3G  InChI             InChI                 1.03   "InChI=1S/C19H29N9O4S2/c20-17-16-18(22-10-21-17)28(11-23-16)8-4-3-7-24-34(31,32)27-14(29)6-2-1-5-13-15-12(9-33-13)25-19(30)26-15/h10-13,15,24H,1-9H2,(H,27,29)(H2,20,21,22)(H2,25,26,30)/t12-,13-,15-/m0/s1"  
N3G  InChIKey          InChI                 1.03   WPCYKZJXLXIRGW-YDHLFZDLSA-N  
N3G  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc2n(CCCCN[S](=O)(=O)NC(=O)CCCC[C@@H]3SC[C@@H]4NC(=O)N[C@H]34)cnc12"  
N3G  SMILES            CACTVS                3.385  "Nc1ncnc2n(CCCCN[S](=O)(=O)NC(=O)CCCC[CH]3SC[CH]4NC(=O)N[CH]34)cnc12"  
N3G  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1nc(c2c(n1)n(cn2)CCCCNS(=O)(=O)NC(=O)CCCC[C@H]3[C@@H]4[C@H](CS3)NC(=O)N4)N"  
N3G  SMILES            "OpenEye OEToolkits"  2.0.7  "c1nc(c2c(n1)n(cn2)CCCCNS(=O)(=O)NC(=O)CCCCC3C4C(CS3)NC(=O)N4)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N3G  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{[4-(6-amino-9H-purin-9-yl)butyl]sulfamoyl}-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide"  
N3G  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[4-(6-aminopurin-9-yl)butylsulfamoyl]pentanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N3G  "Create component"  2019-05-01  RCSB  
N3G  "Initial release"   2020-07-01  RCSB  
##
