data_J4G
#

_chem_comp.id                                   J4G
_chem_comp.name                                 "3'-deoxy-3'-[(L-alpha-glutamyl)amino]adenosine 5'-(dihydrogen phosphate)"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H22 N7 O9 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-08-09
_chem_comp.pdbx_modified_date                   2019-06-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       475.350
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    J4G
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6EC8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J4G  N12  N1   N  0  1  N  N  N  69.581   -8.514  248.216  -3.556   3.745  -1.425  N12  J4G   1  
J4G  C15  C1   C  0  1  N  N  N  65.164   -7.637  252.441  -0.579  -2.432  -0.486  C15  J4G   2  
J4G  C22  C2   C  0  1  N  N  R  67.797   -7.328  254.822   1.618   0.275   0.394  C22  J4G   3  
J4G  C24  C3   C  0  1  Y  N  N  68.308   -8.966  256.549   3.882   1.406   0.450  C24  J4G   4  
J4G  C26  C4   C  0  1  Y  N  N  69.998   -8.967  258.122   4.701   3.478   1.014  C26  J4G   5  
J4G  C28  C5   C  0  1  Y  N  N  68.490  -10.782  258.080   6.235   1.909   0.299  C28  J4G   6  
J4G  O01  O1   O  0  1  N  N  N  69.039   -5.890  253.508   0.745   2.185  -0.877  O01  J4G   7  
J4G  C02  C6   C  0  1  N  N  R  68.597   -7.299  253.729   0.892   0.763  -0.885  C02  J4G   8  
J4G  C03  C7   C  0  1  N  N  S  67.668   -7.735  252.654  -0.484   0.065  -0.764  C03  J4G   9  
J4G  N04  N2   N  0  1  N  N  N  67.938   -7.297  251.357  -1.479   0.981  -0.202  N04  J4G  10  
J4G  C05  C8   C  0  1  N  N  N  68.414   -8.227  250.320  -2.216   1.759  -1.019  C05  J4G  11  
J4G  C06  C9   C  0  1  N  N  S  68.641   -7.687  248.903  -3.240   2.702  -0.441  C06  J4G  12  
J4G  C07  C10  C  0  1  N  N  N  67.262   -7.572  248.172  -4.512   1.924  -0.096  C07  J4G  13  
J4G  C08  C11  C  0  1  N  N  N  67.245   -7.911  246.639  -5.504   2.855   0.604  C08  J4G  14  
J4G  C09  C12  C  0  1  N  N  N  68.356   -7.354  245.752  -6.757   2.089   0.944  C09  J4G  15  
J4G  O10  O2   O  0  1  N  N  N  69.429   -8.010  245.525  -7.773   2.706   1.567  O10  J4G  16  
J4G  O11  O3   O  0  1  N  N  N  68.191   -6.225  245.222  -6.847   0.919   0.655  O11  J4G  17  
J4G  O13  O4   O  0  1  N  N  N  68.560   -9.386  250.561  -2.056   1.700  -2.220  O13  J4G  18  
J4G  C14  C13  C  0  1  N  N  S  66.388   -6.911  253.045  -0.227  -1.110   0.200  C14  J4G  19  
J4G  O16  O5   O  0  1  N  N  N  63.972   -7.001  252.886  -0.450  -3.503   0.451  O16  J4G  20  
J4G  P17  P1   P  0  1  N  N  N  62.787   -6.733  251.694  -0.743  -5.040   0.071  P17  J4G  21  
J4G  O18  O6   O  0  1  N  N  N  63.223   -5.620  250.755  -2.108  -5.158  -0.490  O18  J4G  22  
J4G  O19  O7   O  0  1  N  N  N  62.674   -7.975  250.837   0.330  -5.537  -1.021  O19  J4G  23  
J4G  O20  O8   O  0  1  N  N  N  61.555   -6.337  252.500  -0.625  -5.952   1.393  O20  J4G  24  
J4G  O21  O9   O  0  1  N  N  N  66.374   -6.850  254.334   1.171  -1.090   0.539  O21  J4G  25  
J4G  N23  N3   N  0  1  Y  N  N  67.548   -8.584  255.487   3.072   0.325   0.213  N23  J4G  26  
J4G  N25  N4   N  0  1  Y  N  N  69.418   -8.363  257.089   3.688   2.648   0.880  N25  J4G  27  
J4G  N27  N5   N  0  1  Y  N  N  69.549  -10.140  258.572   5.944   3.130   0.735  N27  J4G  28  
J4G  N29  N6   N  0  1  N  N  N  68.087  -11.975  258.677   7.541   1.554   0.009  N29  J4G  29  
J4G  C30  C14  C  0  1  Y  N  N  67.807  -10.199  256.982   5.187   0.987   0.139  C30  J4G  30  
J4G  N31  N7   N  0  1  Y  N  N  66.735  -10.480  256.221   5.106  -0.302  -0.269  N31  J4G  31  
J4G  C32  C15  C  0  1  Y  N  N  66.594   -9.482  255.352   3.866  -0.694  -0.221  C32  J4G  32  
J4G  H1   H1   H  0  1  N  N  N  70.437   -8.546  248.732  -2.746   4.314  -1.621  H1   J4G  33  
J4G  H2   H2   H  0  1  N  N  N  69.210   -9.438  248.128  -3.929   3.343  -2.272  H2   J4G  34  
J4G  H4   H4   H  0  1  N  N  N  65.163   -8.688  252.766  -1.606  -2.390  -0.850  H4   J4G  35  
J4G  H5   H5   H  0  1  N  N  N  65.216   -7.593  251.343   0.097  -2.598  -1.324  H5   J4G  36  
J4G  H6   H6   H  0  1  N  N  N  68.147   -6.597  255.565   1.319   0.871   1.256  H6   J4G  37  
J4G  H7   H7   H  0  1  N  N  N  70.845   -8.501  258.604   4.509   4.481   1.366  H7   J4G  38  
J4G  H8   H8   H  0  1  N  N  N  69.631   -5.630  254.204   1.584   2.667  -0.861  H8   J4G  39  
J4G  H9   H9   H  0  1  N  N  N  69.461   -7.976  253.805   1.419   0.434  -1.781  H9   J4G  40  
J4G  H10  H10  H  0  1  N  N  N  67.461   -8.814  252.711  -0.810  -0.304  -1.737  H10  J4G  41  
J4G  H11  H11  H  0  1  N  N  N  67.806   -6.333  251.128  -1.607   1.028   0.759  H11  J4G  42  
J4G  H12  H12  H  0  1  N  N  N  69.052   -6.671  248.992  -2.840   3.163   0.462  H12  J4G  43  
J4G  H13  H13  H  0  1  N  N  N  66.909   -6.537  248.288  -4.961   1.537  -1.011  H13  J4G  44  
J4G  H14  H14  H  0  1  N  N  N  66.562   -8.257  248.672  -4.263   1.094   0.565  H14  J4G  45  
J4G  H15  H15  H  0  1  N  N  N  66.292   -7.539  246.236  -5.056   3.241   1.519  H15  J4G  46  
J4G  H16  H16  H  0  1  N  N  N  67.278   -9.007  246.549  -5.754   3.684  -0.057  H16  J4G  47  
J4G  H17  H17  H  0  1  N  N  N  69.989   -7.510  244.943  -8.556   2.174   1.764  H17  J4G  48  
J4G  H18  H18  H  0  1  N  N  N  66.466   -5.917  252.581  -0.829  -0.988   1.101  H18  J4G  49  
J4G  H19  H19  H  0  1  N  N  N  62.898   -7.762  249.939   1.248  -5.488  -0.722  H19  J4G  50  
J4G  H20  H20  H  0  1  N  N  N  61.288   -5.457  252.260  -0.790  -6.892   1.238  H20  J4G  51  
J4G  H21  H21  H  0  1  N  N  N  68.696  -12.188  259.441   8.256   2.199   0.124  H21  J4G  52  
J4G  H22  H22  H  0  1  N  N  N  67.150  -11.879  259.014   7.741   0.659  -0.309  H22  J4G  53  
J4G  H23  H23  H  0  1  N  N  N  65.797   -9.417  254.626   3.517  -1.681  -0.490  H23  J4G  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J4G  O11  C09  DOUB  N  N   1  
J4G  O10  C09  SING  N  N   2  
J4G  C09  C08  SING  N  N   3  
J4G  C08  C07  SING  N  N   4  
J4G  C07  C06  SING  N  N   5  
J4G  N12  C06  SING  N  N   6  
J4G  C06  C05  SING  N  N   7  
J4G  C05  O13  DOUB  N  N   8  
J4G  C05  N04  SING  N  N   9  
J4G  O18  P17  DOUB  N  N  10  
J4G  O19  P17  SING  N  N  11  
J4G  N04  C03  SING  N  N  12  
J4G  P17  O20  SING  N  N  13  
J4G  P17  O16  SING  N  N  14  
J4G  C15  O16  SING  N  N  15  
J4G  C15  C14  SING  N  N  16  
J4G  C03  C14  SING  N  N  17  
J4G  C03  C02  SING  N  N  18  
J4G  C14  O21  SING  N  N  19  
J4G  O01  C02  SING  N  N  20  
J4G  C02  C22  SING  N  N  21  
J4G  O21  C22  SING  N  N  22  
J4G  C22  N23  SING  N  N  23  
J4G  C32  N23  SING  Y  N  24  
J4G  C32  N31  DOUB  Y  N  25  
J4G  N23  C24  SING  Y  N  26  
J4G  N31  C30  SING  Y  N  27  
J4G  C24  C30  DOUB  Y  N  28  
J4G  C24  N25  SING  Y  N  29  
J4G  C30  C28  SING  Y  N  30  
J4G  N25  C26  DOUB  Y  N  31  
J4G  C28  N27  DOUB  Y  N  32  
J4G  C28  N29  SING  N  N  33  
J4G  C26  N27  SING  Y  N  34  
J4G  N12  H1   SING  N  N  35  
J4G  N12  H2   SING  N  N  36  
J4G  C15  H4   SING  N  N  37  
J4G  C15  H5   SING  N  N  38  
J4G  C22  H6   SING  N  N  39  
J4G  C26  H7   SING  N  N  40  
J4G  O01  H8   SING  N  N  41  
J4G  C02  H9   SING  N  N  42  
J4G  C03  H10  SING  N  N  43  
J4G  N04  H11  SING  N  N  44  
J4G  C06  H12  SING  N  N  45  
J4G  C07  H13  SING  N  N  46  
J4G  C07  H14  SING  N  N  47  
J4G  C08  H15  SING  N  N  48  
J4G  C08  H16  SING  N  N  49  
J4G  O10  H17  SING  N  N  50  
J4G  C14  H18  SING  N  N  51  
J4G  O19  H19  SING  N  N  52  
J4G  O20  H20  SING  N  N  53  
J4G  N29  H21  SING  N  N  54  
J4G  N29  H22  SING  N  N  55  
J4G  C32  H23  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J4G  SMILES            ACDLabs               12.01  "NC(C(NC3C(C(n2c1c(c(ncn1)N)nc2)OC3COP(O)(=O)O)O)=O)CCC(O)=O"  
J4G  InChI             InChI                 1.03   "InChI=1S/C15H22N7O9P/c16-6(1-2-8(23)24)14(26)21-9-7(3-30-32(27,28)29)31-15(11(9)25)22-5-20-10-12(17)18-4-19-13(10)22/h4-7,9,11,15,25H,1-3,16H2,(H,21,26)(H,23,24)(H2,17,18,19)(H2,27,28,29)/t6-,7+,9+,11+,15+/m0/s1"  
J4G  InChIKey          InChI                 1.03   SDRBGGWQNQDMBH-HQMNMZSFSA-N  
J4G  SMILES_CANONICAL  CACTVS                3.385  "N[C@@H](CCC(O)=O)C(=O)N[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3c(N)ncnc23"  
J4G  SMILES            CACTVS                3.385  "N[CH](CCC(O)=O)C(=O)N[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3c(N)ncnc23"  
J4G  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)NC(=O)[C@H](CCC(=O)O)N)O)N"  
J4G  SMILES            "OpenEye OEToolkits"  2.0.6  "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)NC(=O)C(CCC(=O)O)N)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
J4G  "SYSTEMATIC NAME"  ACDLabs               12.01  "3'-deoxy-3'-[(L-alpha-glutamyl)amino]adenosine 5'-(dihydrogen phosphate)"  
J4G  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(4~{S})-5-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-2-(phosphonooxymethyl)oxolan-3-yl]amino]-4-azanyl-5-oxidanylidene-pentanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J4G  "Create component"  2018-08-09  RCSB  
J4G  "Initial release"   2019-06-19  RCSB  
##
