data_IKG
# 
_chem_comp.id                                    IKG 
_chem_comp.name                                  "~{N}-[(1~{R})-2-[4-(azetidin-1-ylcarbonyl)phenyl]-1-cyano-ethyl]-3-(3,4-dimethoxyphenyl)-1,2,4-oxadiazole-5-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H23 N5 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "ACV thioaldehyde" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-01 
_chem_comp.pdbx_modified_date                    2023-11-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        461.470 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IKG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8Q0U 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IKG C2  C1  C 0 1 Y N N N N N -5.574 15.407 -12.303 -6.485 0.793  0.679  C2  IKG 1  
IKG C4  C2  C 0 1 Y N N N N N -7.415 16.489 -13.378 -4.566 -0.516 1.270  C4  IKG 2  
IKG C3  C3  C 0 1 Y N N N N N -6.883 15.398 -12.731 -5.827 -0.043 1.569  C3  IKG 3  
IKG C9  C4  C 0 1 Y N N N N N -7.316 18.749 -14.308 -2.595 -0.664 -0.248 C9  IKG 4  
IKG C8  C5  C 0 1 N N N N N N -2.541 17.443 -12.574 -5.843 2.296  -2.607 C8  IKG 5  
IKG C13 C6  C 0 1 N N N N N N -7.079 23.170 -18.920 3.920  -2.915 -0.795 C13 IKG 6  
IKG C15 C7  C 0 1 Y N N N N N -5.966 24.965 -20.282 5.040  -1.329 0.783  C15 IKG 7  
IKG C14 C8  C 0 1 Y N N N N N -7.112 24.443 -19.706 4.231  -1.518 -0.324 C14 IKG 8  
IKG C7  C9  C 0 1 Y N N N N N -4.773 16.542 -12.586 -5.877 1.153  -0.521 C7  IKG 9  
IKG C20 C10 C 0 1 N N N N N N -7.342 28.111 -21.988 5.096  2.420  1.013  C20 IKG 10 
IKG C23 C11 C 0 1 N N N N N N -4.875 28.999 -21.858 3.973  3.688  -0.978 C23 IKG 11 
IKG C24 C12 C 0 1 N N N N N N -5.476 24.094 -17.437 2.415  -4.822 -0.468 C24 IKG 12 
IKG C21 C13 C 0 1 N N N N N N -6.384 30.425 -22.592 4.871  4.941  0.361  C21 IKG 13 
IKG C6  C14 C 0 1 Y N N N N N -5.323 17.633 -13.263 -4.614 0.680  -0.824 C6  IKG 14 
IKG C10 C15 C 0 1 Y N N N N N -7.763 20.488 -15.441 -0.727 -1.669 -0.149 C10 IKG 15 
IKG C12 C16 C 0 1 N N R N N N -6.765 23.444 -17.472 2.652  -3.417 -0.100 C12 IKG 16 
IKG C11 C17 C 0 1 N N N N N N -7.882 21.629 -16.321 0.429  -2.493 0.277  C11 IKG 17 
IKG C5  C18 C 0 1 Y N N N N N -6.648 17.601 -13.679 -3.951 -0.155 0.073  C5  IKG 18 
IKG C1  C19 C 0 1 N N N N N N -5.850 13.622 -10.763 -8.294 0.844  2.222  C1  IKG 19 
IKG O1  O1  O 0 1 N N N N N N -4.999 14.360 -11.632 -7.728 1.257  0.976  O1  IKG 20 
IKG O2  O2  O 0 1 N N N N N N -3.483 16.476 -12.114 -6.526 1.968  -1.395 O2  IKG 21 
IKG N1  N1  N 0 1 Y N N N N N -8.545 19.019 -13.965 -1.905 -0.405 -1.331 N1  IKG 22 
IKG O3  O3  O 0 1 Y N N N N N -8.872 20.165 -14.733 -0.834 -0.972 -1.291 O3  IKG 23 
IKG N2  N2  N 0 1 Y N N N N N -6.763 19.638 -15.215 -1.842 -1.474 0.524  N2  IKG 24 
IKG O4  O4  O 0 1 N N N N N N -8.995 21.973 -16.702 0.402  -3.071 1.345  O4  IKG 25 
IKG N3  N3  N 0 1 N N N N N N -6.763 22.228 -16.728 1.510  -2.602 -0.521 N3  IKG 26 
IKG C16 C20 C 0 1 Y N N N N N -6.008 26.156 -20.989 5.325  -0.052 1.222  C16 IKG 27 
IKG C17 C21 C 0 1 Y N N N N N -7.203 26.843 -21.171 4.795  1.049  0.548  C17 IKG 28 
IKG C18 C22 C 0 1 Y N N N N N -8.346 26.319 -20.583 3.981  0.851  -0.568 C18 IKG 29 
IKG C19 C23 C 0 1 Y N N N N N -8.292 25.140 -19.859 3.708  -0.431 -1.000 C19 IKG 30 
IKG O5  O5  O 0 1 N N N N N N -8.405 28.325 -22.595 5.683  2.590  2.064  O5  IKG 31 
IKG N4  N4  N 0 1 N N N N N N -6.319 29.041 -22.108 4.719  3.481  0.273  N4  IKG 32 
IKG C22 C24 C 0 1 N N N N N N -4.901 30.510 -22.173 4.763  4.990  -1.171 C22 IKG 33 
IKG N5  N5  N 0 1 N N N N N N -4.452 24.621 -17.397 2.231  -5.907 -0.751 N5  IKG 34 
IKG H1  H1  H 0 1 N N N N N N -8.458 16.478 -13.658 -4.055 -1.166 1.965  H1  IKG 35 
IKG H2  H2  H 0 1 N N N N N N -7.497 14.527 -12.557 -6.303 -0.323 2.497  H2  IKG 36 
IKG H3  H3  H 0 1 N N N N N N -1.563 17.255 -12.107 -5.629 1.382  -3.162 H3  IKG 37 
IKG H4  H4  H 0 1 N N N N N N -2.445 17.370 -13.667 -6.470 2.950  -3.212 H4  IKG 38 
IKG H5  H5  H 0 1 N N N N N N -2.889 18.451 -12.303 -4.908 2.804  -2.371 H5  IKG 39 
IKG H6  H6  H 0 1 N N N N N N -8.060 22.678 -18.989 3.765  -2.909 -1.874 H6  IKG 40 
IKG H7  H7  H 0 1 N N N N N N -6.306 22.508 -19.338 4.753  -3.575 -0.551 H7  IKG 41 
IKG H8  H8  H 0 1 N N N N N N -5.029 24.438 -20.179 5.445  -2.182 1.307  H8  IKG 42 
IKG H9  H9  H 0 1 N N N N N N -4.297 28.385 -22.564 4.183  2.936  -1.738 H9  IKG 43 
IKG H10 H10 H 0 1 N N N N N N -4.587 28.742 -20.828 2.905  3.847  -0.825 H10 IKG 44 
IKG H11 H11 H 0 1 N N N N N N -7.065 31.083 -22.033 4.043  5.433  0.870  H11 IKG 45 
IKG H12 H12 H 0 1 N N N N N N -6.571 30.534 -23.670 5.844  5.255  0.737  H12 IKG 46 
IKG H13 H13 H 0 1 N N N N N N -4.716 18.504 -13.464 -4.141 0.958  -1.755 H13 IKG 47 
IKG H14 H14 H 0 1 N N N N N N -7.530 24.124 -17.069 2.775  -3.340 0.980  H14 IKG 48 
IKG H15 H15 H 0 1 N N N N N N -5.276 12.814 -10.286 -7.654 1.175  3.039  H15 IKG 49 
IKG H16 H16 H 0 1 N N N N N N -6.253 14.292 -9.989  -9.285 1.284  2.334  H16 IKG 50 
IKG H17 H17 H 0 1 N N N N N N -6.679 13.190 -11.342 -8.375 -0.243 2.241  H17 IKG 51 
IKG H18 H18 H 0 1 N N N N N N -5.885 21.807 -16.502 1.531  -2.141 -1.374 H18 IKG 52 
IKG H19 H19 H 0 1 N N N N N N -5.096 26.558 -21.406 5.956  0.094  2.086  H19 IKG 53 
IKG H20 H20 H 0 1 N N N N N N -9.288 26.837 -20.691 3.568  1.699  -1.095 H20 IKG 54 
IKG H21 H21 H 0 1 N N N N N N -9.194 24.758 -19.404 3.078  -0.585 -1.864 H21 IKG 55 
IKG H22 H22 H 0 1 N N N N N N -4.224 30.806 -22.988 5.713  4.863  -1.690 H22 IKG 56 
IKG H23 H23 H 0 1 N N N N N N -4.722 31.150 -21.297 4.170  5.822  -1.551 H23 IKG 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IKG O5  C20 DOUB N N 1  
IKG C21 C22 SING N N 2  
IKG C21 N4  SING N N 3  
IKG C22 C23 SING N N 4  
IKG N4  C20 SING N N 5  
IKG N4  C23 SING N N 6  
IKG C20 C17 SING N N 7  
IKG C17 C16 DOUB Y N 8  
IKG C17 C18 SING Y N 9  
IKG C16 C15 SING Y N 10 
IKG C18 C19 DOUB Y N 11 
IKG C15 C14 DOUB Y N 12 
IKG C19 C14 SING Y N 13 
IKG C14 C13 SING N N 14 
IKG C13 C12 SING N N 15 
IKG C12 C24 SING N N 16 
IKG C12 N3  SING N N 17 
IKG C24 N5  TRIP N N 18 
IKG N3  C11 SING N N 19 
IKG O4  C11 DOUB N N 20 
IKG C11 C10 SING N N 21 
IKG C10 N2  DOUB Y N 22 
IKG C10 O3  SING Y N 23 
IKG N2  C9  SING Y N 24 
IKG O3  N1  SING Y N 25 
IKG C9  N1  DOUB Y N 26 
IKG C9  C5  SING N N 27 
IKG C5  C4  DOUB Y N 28 
IKG C5  C6  SING Y N 29 
IKG C4  C3  SING Y N 30 
IKG C6  C7  DOUB Y N 31 
IKG C3  C2  DOUB Y N 32 
IKG C7  C2  SING Y N 33 
IKG C7  O2  SING N N 34 
IKG C8  O2  SING N N 35 
IKG C2  O1  SING N N 36 
IKG O1  C1  SING N N 37 
IKG C4  H1  SING N N 38 
IKG C3  H2  SING N N 39 
IKG C8  H3  SING N N 40 
IKG C8  H4  SING N N 41 
IKG C8  H5  SING N N 42 
IKG C13 H6  SING N N 43 
IKG C13 H7  SING N N 44 
IKG C15 H8  SING N N 45 
IKG C23 H9  SING N N 46 
IKG C23 H10 SING N N 47 
IKG C21 H11 SING N N 48 
IKG C21 H12 SING N N 49 
IKG C6  H13 SING N N 50 
IKG C12 H14 SING N N 51 
IKG C1  H15 SING N N 52 
IKG C1  H16 SING N N 53 
IKG C1  H17 SING N N 54 
IKG N3  H18 SING N N 55 
IKG C16 H19 SING N N 56 
IKG C18 H20 SING N N 57 
IKG C19 H21 SING N N 58 
IKG C22 H22 SING N N 59 
IKG C22 H23 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IKG InChI            InChI                1.06  "InChI=1S/C24H23N5O5/c1-32-19-9-8-17(13-20(19)33-2)21-27-23(34-28-21)22(30)26-18(14-25)12-15-4-6-16(7-5-15)24(31)29-10-3-11-29/h4-9,13,18H,3,10-12H2,1-2H3,(H,26,30)/t18-/m1/s1" 
IKG InChIKey         InChI                1.06  SMNJIXFCHIEXRX-GOSISDBHSA-N                                                                                                                                                      
IKG SMILES_CANONICAL CACTVS               3.385 "COc1ccc(cc1OC)c2noc(n2)C(=O)N[C@H](Cc3ccc(cc3)C(=O)N4CCC4)C#N"                                                                                                                  
IKG SMILES           CACTVS               3.385 "COc1ccc(cc1OC)c2noc(n2)C(=O)N[CH](Cc3ccc(cc3)C(=O)N4CCC4)C#N"                                                                                                                   
IKG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)c2nc(on2)C(=O)N[C@H](Cc3ccc(cc3)C(=O)N4CCC4)C#N"                                                                                                                  
IKG SMILES           "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)c2nc(on2)C(=O)NC(Cc3ccc(cc3)C(=O)N4CCC4)C#N"                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           IKG 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(1~{R})-2-[4-(azetidin-1-ylcarbonyl)phenyl]-1-cyano-ethyl]-3-(3,4-dimethoxyphenyl)-1,2,4-oxadiazole-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IKG "Create component" 2023-08-01 PDBE 
IKG "Initial release"  2023-11-22 RCSB 
# 
