data_G5G
# 
_chem_comp.id                                    G5G 
_chem_comp.name                                  "(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H13 N O4" 
_chem_comp.mon_nstd_parent_comp_id               LEU 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-05-04 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        163.172 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     G5G 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6D8C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
G5G CG  CG  C 0 1 N N S N N N 154.145 149.279 126.227 1.105  0.167  -0.007 CG  G5G 1  
G5G CB  CB  C 0 1 N N N N N N 152.723 148.774 126.511 -0.025 1.102  0.428  CB  G5G 2  
G5G CA  CA  C 0 1 N N S Y N N 152.080 147.980 125.387 -1.285 0.791  -0.382 CA  G5G 3  
G5G N   N   N 0 1 N N N Y Y N 150.674 147.880 125.690 -2.321 1.787  -0.078 N   G5G 4  
G5G C   C   C 0 1 N N N Y N Y 152.635 146.562 125.242 -1.788 -0.583 -0.022 C   G5G 5  
G5G O   O   O 0 1 N N N Y N Y 153.726 146.415 124.809 -2.708 -0.706 0.752  O   G5G 6  
G5G O1  O1  O 0 1 N N N N N N 154.274 149.614 124.876 0.777  -1.176 0.353  O1  G5G 7  
G5G CD1 CD1 C 0 1 N N N N N N 155.192 148.206 126.541 2.404  0.579  0.689  CD1 G5G 8  
G5G CD2 CD2 C 0 1 N N N N N N 154.389 150.534 127.056 1.287  0.259  -1.523 CD2 G5G 9  
G5G O2  O2  O 0 1 N N N N N N 156.233 148.732 127.317 3.482  -0.218 0.195  O2  G5G 10 
G5G OXT O3  O 0 1 N Y N Y N Y 151.833 145.396 125.579 -1.214 -1.670 -0.560 O3  G5G 11 
G5G H1  H1  H 0 1 N N N N N N 152.087 149.647 126.717 -0.230 0.956  1.489  H1  G5G 12 
G5G H3  H2  H 0 1 N N N N N N 152.762 148.131 127.402 0.272  2.137  0.255  H2  G5G 13 
G5G HA  H3  H 0 1 N N N Y N N 152.225 148.518 124.439 -1.050 0.824  -1.446 H3  G5G 14 
G5G H2  H5  H 0 1 N Y N Y Y N 150.288 148.797 125.790 -2.614 1.722  0.885  H5  G5G 15 
G5G H   H4  H 0 1 N N N Y Y N 150.206 147.401 124.947 -2.003 2.719  -0.297 H4  G5G 16 
G5G H8  H8  H 0 1 N N N N N N 155.156 149.925 124.709 0.646  -1.309 1.301  H8  G5G 17 
G5G H10 H10 H 0 1 N N N N N N 154.711 147.385 127.093 2.607  1.631  0.486  H10 G5G 18 
G5G H9  H9  H 0 1 N N N N N N 155.606 147.820 125.598 2.303  0.429  1.764  H9  G5G 19 
G5G H11 H11 H 0 1 N N N N N N 154.292 150.293 128.125 1.612  1.265  -1.790 H11 G5G 20 
G5G H12 H12 H 0 1 N N N N N N 155.402 150.914 126.856 2.039  -0.462 -1.843 H12 G5G 21 
G5G H13 H13 H 0 1 N N N N N N 153.649 151.302 126.785 0.341  0.041  -2.017 H13 G5G 22 
G5G H14 H14 H 0 1 N N N N N N 156.869 148.050 127.499 4.339  -0.011 0.594  H14 G5G 23 
G5G HXT H7  H 0 1 N Y N Y N Y 152.328 144.606 125.393 -1.571 -2.530 -0.298 H7  G5G 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
G5G O   C   DOUB N N 1  
G5G O1  CG  SING N N 2  
G5G C   CA  SING N N 3  
G5G CA  N   SING N N 4  
G5G CA  CB  SING N N 5  
G5G CG  CB  SING N N 6  
G5G CG  CD1 SING N N 7  
G5G CG  CD2 SING N N 8  
G5G CD1 O2  SING N N 9  
G5G C   OXT SING N N 10 
G5G CB  H1  SING N N 11 
G5G CB  H3  SING N N 12 
G5G CA  HA  SING N N 13 
G5G N   H2  SING N N 14 
G5G N   H   SING N N 15 
G5G O1  H8  SING N N 16 
G5G CD1 H10 SING N N 17 
G5G CD1 H9  SING N N 18 
G5G CD2 H11 SING N N 19 
G5G CD2 H12 SING N N 20 
G5G CD2 H13 SING N N 21 
G5G O2  H14 SING N N 22 
G5G OXT HXT SING N N 23 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
G5G SMILES           ACDLabs              12.01 "C(CC(N)C(O)=O)(CO)(C)O"                                                                
G5G InChI            InChI                1.03  "InChI=1S/C6H13NO4/c1-6(11,3-8)2-4(7)5(9)10/h4,8,11H,2-3,7H2,1H3,(H,9,10)/t4-,6-/m0/s1" 
G5G InChIKey         InChI                1.03  ASHXMQKUZGLXMR-NJGYIYPDSA-N                                                             
G5G SMILES_CANONICAL CACTVS               3.385 "C[C@@](O)(CO)C[C@H](N)C(O)=O"                                                          
G5G SMILES           CACTVS               3.385 "C[C](O)(CO)C[CH](N)C(O)=O"                                                             
G5G SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@](C[C@@H](C(=O)O)N)(CO)O"                                                          
G5G SMILES           "OpenEye OEToolkits" 2.0.6 "CC(CC(C(=O)O)N)(CO)O"                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
G5G "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,4S)-2-amino-4,5-dihydroxy-4-methylpentanoic acid (non-preferred name)" 
G5G "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},4~{S})-2-azanyl-4-methyl-4,5-bis(oxidanyl)pentanoic acid"           
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
G5G "Create component"      2018-05-04 RCSB 
G5G "Modify parent residue" 2018-05-04 RCSB 
G5G "Initial release"       2018-09-19 RCSB 
G5G "Modify backbone"       2023-11-03 PDBE 
G5G "Modify PCM"            2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            G5G 
_pdbx_chem_comp_pcm.modified_residue_id                LEU 
_pdbx_chem_comp_pcm.type                               Hydroxylation 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     PTM-0666 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
