data_9ZG
# 
_chem_comp.id                                    9ZG 
_chem_comp.name                                  "(phenylmethyl) ~{N}-[(2~{S})-1-[[aminomethyl(methyl)amino]-methyl-amino]-1-oxidanylidene-3-phenyl-propan-2-yl]carbamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H26 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-11-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        370.445 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9ZG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QBO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9ZG C4  C1  C 0 1 N N N N N N 31.291 -4.468 7.925  -1.751 -1.753 -0.413 C4  9ZG 1  
9ZG C14 C2  C 0 1 N N N N N N 33.680 -0.714 10.683 3.355  -0.780 1.015  C14 9ZG 2  
9ZG C5  C3  C 0 1 N N S N N N 32.439 -3.769 7.221  -1.313 -0.345 -0.103 C5  9ZG 3  
9ZG C6  C4  C 0 1 N N N N N N 33.148 -4.744 6.293  -2.173 0.643  -0.895 C6  9ZG 4  
9ZG C11 C5  C 0 1 Y N N N N N 35.152 -2.424 4.086  -2.164 3.954  0.918  C11 9ZG 5  
9ZG C7  C6  C 0 1 Y N N N N N 34.291 -4.129 5.541  -1.819 2.052  -0.494 C7  9ZG 6  
9ZG C8  C7  C 0 1 Y N N N N N 35.569 -4.652 5.636  -0.825 2.733  -1.170 C8  9ZG 7  
9ZG C9  C8  C 0 1 Y N N N N N 36.632 -4.085 4.934  -0.500 4.025  -0.802 C9  9ZG 8  
9ZG C10 C9  C 0 1 Y N N N N N 36.413 -2.974 4.156  -1.169 4.636  0.242  C10 9ZG 9  
9ZG C12 C10 C 0 1 Y N N N N N 34.096 -3.011 4.757  -2.489 2.662  0.550  C12 9ZG 10 
9ZG C13 C11 C 0 1 N N N N N N 33.062 -2.084 8.851  1.067  -0.531 0.383  C13 9ZG 11 
9ZG N1  N1  N 0 1 N N N N N N 28.912 -4.871 7.971  -3.901 -1.252 0.393  N1  9ZG 12 
9ZG N2  N2  N 0 1 N N N N N N 27.729 -6.978 7.785  -5.653 0.268  -0.220 N2  9ZG 13 
9ZG C3  C12 C 0 1 N N N N N N 29.901 -3.786 6.024  -3.444 -3.504 -0.461 C3  9ZG 14 
9ZG N3  N3  N 0 1 N N N N N N 30.063 -4.427 7.323  -3.017 -2.137 -0.155 N3  9ZG 15 
9ZG C1  C13 C 0 1 N N N N N N 28.315 -4.129 9.106  -4.331 -1.693 1.726  C1  9ZG 16 
9ZG C2  C14 C 0 1 N N N N N N 28.662 -6.098 7.298  -5.056 -1.047 -0.491 C2  9ZG 17 
9ZG O1  O1  O 0 1 N N N N N N 31.465 -4.995 9.022  -0.966 -2.539 -0.899 O1  9ZG 18 
9ZG N4  N4  N 0 1 N N N N N N 33.382 -3.201 8.165  0.093  -0.177 -0.479 N4  9ZG 19 
9ZG O2  O2  O 0 1 N N N N N N 32.022 -1.456 8.735  0.779  -0.990 1.470  O2  9ZG 20 
9ZG O3  O3  O 0 1 N N N N N N 34.027 -1.776 9.737  2.359  -0.377 0.038  O3  9ZG 21 
9ZG C15 C15 C 0 1 Y N N N N N 34.538 -0.811 11.913 4.734  -0.536 0.458  C15 9ZG 22 
9ZG C16 C16 C 0 1 Y N N N N N 35.833 -1.292 11.846 5.372  -1.526 -0.266 C16 9ZG 23 
9ZG C17 C17 C 0 1 Y N N N N N 36.629 -1.376 12.982 6.636  -1.302 -0.777 C17 9ZG 24 
9ZG C18 C18 C 0 1 Y N N N N N 36.134 -0.970 14.194 7.263  -0.088 -0.565 C18 9ZG 25 
9ZG C19 C19 C 0 1 Y N N N N N 34.846 -0.496 14.276 6.624  0.902  0.158  C19 9ZG 26 
9ZG C20 C20 C 0 1 Y N N N N N 34.047 -0.415 13.143 5.358  0.680  0.666  C20 9ZG 27 
9ZG H1  H1  H 0 1 N N N N N N 33.840 0.264  10.205 3.224  -0.199 1.928  H1  9ZG 28 
9ZG H2  H2  H 0 1 N N N N N N 32.623 -0.814 10.969 3.236  -1.840 1.239  H2  9ZG 29 
9ZG H3  H3  H 0 1 N N N N N N 32.019 -2.959 6.606  -1.430 -0.154 0.963  H3  9ZG 30 
9ZG H4  H4  H 0 1 N N N N N N 32.417 -5.126 5.565  -1.989 0.511  -1.961 H4  9ZG 31 
9ZG H5  H5  H 0 1 N N N N N N 33.536 -5.579 6.895  -3.227 0.458  -0.683 H5  9ZG 32 
9ZG H6  H6  H 0 1 N N N N N N 34.988 -1.529 3.504  -2.684 4.430  1.736  H6  9ZG 33 
9ZG H7  H7  H 0 1 N N N N N N 35.746 -5.513 6.264  -0.301 2.256  -1.985 H7  9ZG 34 
9ZG H8  H8  H 0 1 N N N N N N 37.620 -4.516 5.001  0.277  4.558  -1.330 H8  9ZG 35 
9ZG H9  H9  H 0 1 N N N N N N 37.228 -2.533 3.601  -0.916 5.646  0.529  H9  9ZG 36 
9ZG H10 H10 H 0 1 N N N N N N 33.106 -2.589 4.666  -3.266 2.129  1.079  H10 9ZG 37 
9ZG H11 H11 H 0 1 N N N N N N 27.685 -7.781 7.191  -4.969 1.003  -0.319 H11 9ZG 38 
9ZG H12 H12 H 0 1 N N N N N N 27.988 -7.261 8.709  -6.451 0.433  -0.816 H12 9ZG 39 
9ZG H14 H14 H 0 1 N N N N N N 28.849 -3.855 5.709  -3.267 -4.143 0.404  H14 9ZG 40 
9ZG H15 H15 H 0 1 N N N N N N 30.192 -2.728 6.099  -4.507 -3.507 -0.704 H15 9ZG 41 
9ZG H16 H16 H 0 1 N N N N N N 30.539 -4.291 5.284  -2.876 -3.880 -1.313 H16 9ZG 42 
9ZG H17 H17 H 0 1 N N N N N N 28.870 -3.193 9.265  -3.463 -1.770 2.381  H17 9ZG 43 
9ZG H18 H18 H 0 1 N N N N N N 27.263 -3.898 8.880  -5.034 -0.970 2.139  H18 9ZG 44 
9ZG H19 H19 H 0 1 N N N N N N 28.368 -4.746 10.015 -4.814 -2.667 1.648  H19 9ZG 45 
9ZG H20 H20 H 0 1 N N N N N N 29.619 -6.640 7.263  -4.731 -1.090 -1.531 H20 9ZG 46 
9ZG H21 H21 H 0 1 N N N N N N 28.349 -5.839 6.276  -5.796 -1.826 -0.310 H21 9ZG 47 
9ZG H22 H22 H 0 1 N N N N N N 34.270 -3.638 8.308  0.323  0.190  -1.347 H22 9ZG 48 
9ZG H23 H23 H 0 1 N N N N N N 36.233 -1.608 10.894 4.883  -2.474 -0.432 H23 9ZG 49 
9ZG H24 H24 H 0 1 N N N N N N 37.636 -1.760 12.910 7.135  -2.075 -1.342 H24 9ZG 50 
9ZG H25 H25 H 0 1 N N N N N N 36.752 -1.022 15.079 8.251  0.087  -0.964 H25 9ZG 51 
9ZG H26 H26 H 0 1 N N N N N N 34.451 -0.183 15.232 7.114  1.851  0.324  H26 9ZG 52 
9ZG H27 H27 H 0 1 N N N N N N 33.037 -0.041 13.223 4.858  1.455  1.227  H27 9ZG 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9ZG C11 C10 DOUB Y N 1  
9ZG C11 C12 SING Y N 2  
9ZG C10 C9  SING Y N 3  
9ZG C12 C7  DOUB Y N 4  
9ZG C9  C8  DOUB Y N 5  
9ZG C7  C8  SING Y N 6  
9ZG C7  C6  SING N N 7  
9ZG C3  N3  SING N N 8  
9ZG C6  C5  SING N N 9  
9ZG C5  C4  SING N N 10 
9ZG C5  N4  SING N N 11 
9ZG C2  N2  SING N N 12 
9ZG C2  N1  SING N N 13 
9ZG N3  C4  SING N N 14 
9ZG N3  N1  SING N N 15 
9ZG C4  O1  DOUB N N 16 
9ZG N1  C1  SING N N 17 
9ZG N4  C13 SING N N 18 
9ZG O2  C13 DOUB N N 19 
9ZG C13 O3  SING N N 20 
9ZG O3  C14 SING N N 21 
9ZG C14 C15 SING N N 22 
9ZG C16 C15 DOUB Y N 23 
9ZG C16 C17 SING Y N 24 
9ZG C15 C20 SING Y N 25 
9ZG C17 C18 DOUB Y N 26 
9ZG C20 C19 DOUB Y N 27 
9ZG C18 C19 SING Y N 28 
9ZG C14 H1  SING N N 29 
9ZG C14 H2  SING N N 30 
9ZG C5  H3  SING N N 31 
9ZG C6  H4  SING N N 32 
9ZG C6  H5  SING N N 33 
9ZG C11 H6  SING N N 34 
9ZG C8  H7  SING N N 35 
9ZG C9  H8  SING N N 36 
9ZG C10 H9  SING N N 37 
9ZG C12 H10 SING N N 38 
9ZG N2  H11 SING N N 39 
9ZG N2  H12 SING N N 40 
9ZG C3  H14 SING N N 41 
9ZG C3  H15 SING N N 42 
9ZG C3  H16 SING N N 43 
9ZG C1  H17 SING N N 44 
9ZG C1  H18 SING N N 45 
9ZG C1  H19 SING N N 46 
9ZG C2  H20 SING N N 47 
9ZG C2  H21 SING N N 48 
9ZG N4  H22 SING N N 49 
9ZG C16 H23 SING N N 50 
9ZG C17 H24 SING N N 51 
9ZG C18 H25 SING N N 52 
9ZG C19 H26 SING N N 53 
9ZG C20 H27 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9ZG InChI            InChI                1.06  "InChI=1S/C20H26N4O3/c1-23(15-21)24(2)19(25)18(13-16-9-5-3-6-10-16)22-20(26)27-14-17-11-7-4-8-12-17/h3-12,18H,13-15,21H2,1-2H3,(H,22,26)/t18-/m0/s1" 
9ZG InChIKey         InChI                1.06  OUWJIALCFGQZPQ-SFHVURJKSA-N                                                                                                                          
9ZG SMILES_CANONICAL CACTVS               3.385 "CN(CN)N(C)C(=O)[C@H](Cc1ccccc1)NC(=O)OCc2ccccc2"                                                                                                    
9ZG SMILES           CACTVS               3.385 "CN(CN)N(C)C(=O)[CH](Cc1ccccc1)NC(=O)OCc2ccccc2"                                                                                                     
9ZG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CN)N(C)C(=O)[C@H](Cc1ccccc1)NC(=O)OCc2ccccc2"                                                                                                    
9ZG SMILES           "OpenEye OEToolkits" 2.0.7 "CN(CN)N(C)C(=O)C(Cc1ccccc1)NC(=O)OCc2ccccc2"                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           9ZG 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(phenylmethyl) ~{N}-[(2~{S})-1-[[aminomethyl(methyl)amino]-methyl-amino]-1-oxidanylidene-3-phenyl-propan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9ZG "Create component"  2021-11-22 PDBE 
9ZG "Initial release"   2022-01-26 RCSB 
9ZG "Modify descriptor" 2022-08-22 RCSB 
9ZG "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            9ZG 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
