data_9QG
#

_chem_comp.id                                   9QG
_chem_comp.name                                 "methyl 3-O-[(1R)-1-carboxyethyl]-beta-D-galactopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C10 H18 O8"
_chem_comp.mon_nstd_parent_comp_id              GAL
_chem_comp.pdbx_synonyms                        
;methyl 3-O-[(1R)-1-carboxyethyl]-beta-D-galactoside; methyl 3-O-[(1R)-1-carboxyethyl]-D-galactoside; methyl
3-O-[(1R)-1-carboxyethyl]-galactoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-05-25
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       266.245
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9QG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5VWG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  9QG  "methyl 3-O-[(1R)-1-carboxyethyl]-beta-D-galactoside"  PDB  ?  
2  9QG  "methyl 3-O-[(1R)-1-carboxyethyl]-D-galactoside"       PDB  ?  
3  9QG  "methyl 3-O-[(1R)-1-carboxyethyl]-galactoside"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9QG  O1   O1   O  0  1  N  N  N   1.652  -0.685   -3.577  -2.009  -2.524  -0.322  O1   9QG   1  
9QG  O5   O5   O  0  1  N  N  N   2.717  -1.805   -5.321  -2.455  -0.240  -0.142  O5   9QG   2  
9QG  C6   C6   C  0  1  N  N  N   3.809  -3.174   -6.952  -3.147   2.074  -0.064  C6   9QG   3  
9QG  O6   O6   O  0  1  N  N  N   3.098  -4.401   -6.854  -4.427   1.755   0.485  O6   9QG   4  
9QG  C1   C1   C  0  1  N  N  R   1.787  -0.764   -5.000  -1.570  -1.291   0.252  C1   9QG   5  
9QG  C2   C2   C  0  1  N  N  R   2.286   0.579   -5.547  -0.155  -0.975  -0.239  C2   9QG   6  
9QG  C3   C3   C  0  1  N  N  S   2.577   0.518   -7.055   0.285   0.377   0.332  C3   9QG   7  
9QG  C4   C4   C  0  1  N  N  S   3.386  -0.744   -7.410  -0.727   1.448  -0.084  C4   9QG   8  
9QG  C5   C5   C  0  1  N  N  R   2.856  -2.009   -6.727  -2.121   1.039   0.400  C5   9QG   9  
9QG  O2   O2   O  0  1  N  N  N   1.313   1.593   -5.259   0.743  -1.995   0.204  O2   9QG  10  
9QG  O3   O3   O  0  1  N  N  N   3.324   1.675   -7.470   1.577   0.714  -0.177  O3   9QG  11  
9QG  O4   O4   O  0  1  N  N  N   4.774  -0.605   -7.050  -0.734   1.572  -1.508  O4   9QG  12  
9QG  OAR  OAR  O  0  1  N  N  N   1.189   1.951   -9.982   4.962  -0.580   0.276  OAR  9QG  13  
9QG  CAP  CAP  C  0  1  N  N  N   2.387   2.213   -9.707   3.855  -0.031  -0.250  CAP  9QG  14  
9QG  OAQ  OAQ  O  0  1  N  N  N   3.308   2.110  -10.557   3.816   0.243  -1.426  OAQ  9QG  15  
9QG  CAM  CAM  C  0  1  N  N  R   2.740   2.691   -8.318   2.660   0.242   0.627  CAM  9QG  16  
9QG  CAN  CAN  C  0  1  N  N  N   1.555   3.409   -7.667   3.023   1.304   1.667  CAN  9QG  17  
9QG  CAO  CAO  C  0  1  N  N  N   0.648  -1.554   -3.043  -3.279  -2.969   0.159  CAO  9QG  18  
9QG  H61  H1   H  0  1  N  N  N   4.602  -3.149   -6.191  -3.206   2.065  -1.152  H61  9QG  19  
9QG  H62  H2   H  0  1  N  N  N   4.258  -3.091   -7.953  -2.843   3.064   0.275  H62  9QG  20  
9QG  HO6  H3   H  0  1  N  Y  N   3.696  -5.126   -6.995  -5.128   2.371   0.232  HO6  9QG  21  
9QG  H1   H4   H  0  1  N  N  N   0.810  -0.984   -5.455  -1.568  -1.376   1.338  H1   9QG  22  
9QG  H2   H5   H  0  1  N  N  N   3.227   0.825   -5.032  -0.148  -0.931  -1.328  H2   9QG  23  
9QG  H3   H6   H  0  1  N  N  N   1.619   0.480   -7.594   0.326   0.317   1.420  H3   9QG  24  
9QG  H4   H7   H  0  1  N  N  N   3.312  -0.893   -8.497  -0.451   2.403   0.363  H4   9QG  25  
9QG  H5   H8   H  0  1  N  N  N   1.880  -2.262   -7.168  -2.126   0.984   1.489  H5   9QG  26  
9QG  HO2  H9   H  0  1  N  Y  N   1.146   1.616   -4.324   0.521  -2.880  -0.117  HO2  9QG  27  
9QG  HO4  H10  H  0  1  N  Y  N   5.243  -1.398   -7.282  -1.353   2.234  -1.842  HO4  9QG  28  
9QG  H11  H11  H  0  1  N  N  N   1.124   1.681  -10.890   5.702  -0.736  -0.326  H11  9QG  29  
9QG  H12  H12  H  0  1  N  N  N   3.512   3.463   -8.456   2.363  -0.677   1.133  H12  9QG  30  
9QG  H13  H13  H  0  1  N  N  N   1.839   3.746   -6.659   2.159   1.501   2.301  H13  9QG  31  
9QG  H14  H14  H  0  1  N  N  N   1.273   4.279   -8.278   3.849   0.944   2.281  H14  9QG  32  
9QG  H15  H15  H  0  1  N  N  N   0.702   2.718   -7.596   3.320   2.222   1.161  H15  9QG  33  
9QG  H16  H16  H  0  1  N  N  N   0.604  -1.437   -1.950  -3.540  -3.911  -0.325  H16  9QG  34  
9QG  H17  H17  H  0  1  N  N  N  -0.329  -1.297   -3.479  -3.227  -3.117   1.237  H17  9QG  35  
9QG  H18  H18  H  0  1  N  N  N   0.897  -2.597   -3.290  -4.037  -2.220  -0.070  H18  9QG  36  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9QG  OAQ  CAP  DOUB  N  N   1  
9QG  OAR  CAP  SING  N  N   2  
9QG  CAP  CAM  SING  N  N   3  
9QG  CAM  CAN  SING  N  N   4  
9QG  CAM  O3   SING  N  N   5  
9QG  O3   C3   SING  N  N   6  
9QG  C4   C3   SING  N  N   7  
9QG  C4   O4   SING  N  N   8  
9QG  C4   C5   SING  N  N   9  
9QG  C3   C2   SING  N  N  10  
9QG  C6   O6   SING  N  N  11  
9QG  C6   C5   SING  N  N  12  
9QG  C5   O5   SING  N  N  13  
9QG  C2   O2   SING  N  N  14  
9QG  C2   C1   SING  N  N  15  
9QG  O5   C1   SING  N  N  16  
9QG  C1   O1   SING  N  N  17  
9QG  O1   CAO  SING  N  N  18  
9QG  C6   H61  SING  N  N  19  
9QG  C6   H62  SING  N  N  20  
9QG  O6   HO6  SING  N  N  21  
9QG  C1   H1   SING  N  N  22  
9QG  C2   H2   SING  N  N  23  
9QG  C3   H3   SING  N  N  24  
9QG  C4   H4   SING  N  N  25  
9QG  C5   H5   SING  N  N  26  
9QG  O2   HO2  SING  N  N  27  
9QG  O4   HO4  SING  N  N  28  
9QG  OAR  H11  SING  N  N  29  
9QG  CAM  H12  SING  N  N  30  
9QG  CAN  H13  SING  N  N  31  
9QG  CAN  H14  SING  N  N  32  
9QG  CAN  H15  SING  N  N  33  
9QG  CAO  H16  SING  N  N  34  
9QG  CAO  H17  SING  N  N  35  
9QG  CAO  H18  SING  N  N  36  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9QG  SMILES            ACDLabs               12.01  "O(C)C1OC(CO)C(C(C1O)OC(C(O)=O)C)O"  
9QG  InChI             InChI                 1.03   "InChI=1S/C10H18O8/c1-4(9(14)15)17-8-6(12)5(3-11)18-10(16-2)7(8)13/h4-8,10-13H,3H2,1-2H3,(H,14,15)/t4-,5-,6+,7-,8+,10-/m1/s1"  
9QG  InChIKey          InChI                 1.03   PXMURYZLIUEKLA-BEESJRNYSA-N  
9QG  SMILES_CANONICAL  CACTVS                3.385  "CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O[C@H](C)C(O)=O)[C@H]1O"  
9QG  SMILES            CACTVS                3.385  "CO[CH]1O[CH](CO)[CH](O)[CH](O[CH](C)C(O)=O)[CH]1O"  
9QG  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@H](C(=O)O)O[C@H]1[C@H]([C@H](O[C@H]([C@@H]1O)OC)CO)O"  
9QG  SMILES            "OpenEye OEToolkits"  2.0.6  "CC(C(=O)O)OC1C(C(OC(C1O)OC)CO)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9QG  "SYSTEMATIC NAME"  ACDLabs               12.01  "methyl 3-O-[(1R)-1-carboxyethyl]-beta-D-galactopyranoside"  
9QG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(2~{R})-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-methoxy-3,5-bis(oxidanyl)oxan-4-yl]oxypropanoic acid"  
#
_pdbx_chem_comp_related.comp_id            9QG
_pdbx_chem_comp_related.related_comp_id    GAL
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  9QG  C1   GAL  C1   "Carbohydrate core"  
 2  9QG  C2   GAL  C2   "Carbohydrate core"  
 3  9QG  C3   GAL  C3   "Carbohydrate core"  
 4  9QG  C4   GAL  C4   "Carbohydrate core"  
 5  9QG  C5   GAL  C5   "Carbohydrate core"  
 6  9QG  C6   GAL  C6   "Carbohydrate core"  
 7  9QG  O1   GAL  O1   "Carbohydrate core"  
 8  9QG  O2   GAL  O2   "Carbohydrate core"  
 9  9QG  O3   GAL  O3   "Carbohydrate core"  
10  9QG  O4   GAL  O4   "Carbohydrate core"  
11  9QG  O5   GAL  O5   "Carbohydrate core"  
12  9QG  O6   GAL  O6   "Carbohydrate core"  
13  9QG  H61  GAL  H61  "Carbohydrate core"  
14  9QG  HO4  GAL  HO4  "Carbohydrate core"  
15  9QG  H62  GAL  H62  "Carbohydrate core"  
16  9QG  HO6  GAL  HO6  "Carbohydrate core"  
17  9QG  H1   GAL  H1   "Carbohydrate core"  
18  9QG  H2   GAL  H2   "Carbohydrate core"  
19  9QG  H3   GAL  H3   "Carbohydrate core"  
20  9QG  H4   GAL  H4   "Carbohydrate core"  
21  9QG  H5   GAL  H5   "Carbohydrate core"  
22  9QG  HO2  GAL  HO2  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
9QG  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
9QG  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
9QG  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
9QG  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9QG  "Create component"          2017-05-25  RCSB  
9QG  "Initial release"           2018-05-23  RCSB  
9QG  "Other modification"        2020-07-03  RCSB  
9QG  "Modify parent residue"     2020-07-17  RCSB  
9QG  "Modify synonyms"           2020-07-17  RCSB  
9QG  "Modify internal type"      2020-07-17  RCSB  
9QG  "Modify linking type"       2020-07-17  RCSB  
9QG  "Modify atom id"            2020-07-17  RCSB  
9QG  "Modify component atom id"  2020-07-17  RCSB  
9QG  "Modify leaving atom flag"  2020-07-17  RCSB  
##
