data_9KG
# 
_chem_comp.id                                    9KG 
_chem_comp.name                                  "N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-N-methylprop-2-enamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H24 N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-17 
_chem_comp.pdbx_modified_date                    2017-08-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        496.514 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9KG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5VQR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9KG N1  N1  N 0 1 N N N 844.167 -36.982 140.194 -4.212 -0.250 -1.496 N1  9KG 1  
9KG C2  C1  C 0 1 Y N N 846.280 -34.280 142.279 -1.646 2.253  0.596  C2  9KG 2  
9KG N2  N2  N 0 1 N N N 844.607 -39.216 140.611 -4.458 -2.096 -0.076 N2  9KG 3  
9KG N3  N3  N 0 1 N N N 842.154 -30.916 145.699 3.090  1.278  -1.182 N3  9KG 4  
9KG C4  C2  C 0 1 Y N N 846.816 -34.286 144.640 -0.394 2.792  2.576  C4  9KG 5  
9KG N4  N4  N 0 1 N N N 839.365 -36.717 150.028 4.258  -6.023 0.408  N4  9KG 6  
9KG C6  C3  C 0 1 Y N N 848.561 -33.909 143.006 -1.493 4.527  1.340  C6  9KG 7  
9KG C7  C4  C 0 1 N N N 845.747 -35.092 140.019 -2.911 1.817  -1.371 C7  9KG 8  
9KG C9  C5  C 0 1 N N N 844.929 -38.094 139.889 -3.677 -1.262 -0.788 C9  9KG 9  
9KG C1  C6  C 0 1 Y N N 847.623 -34.030 141.987 -1.961 3.592  0.434  C1  9KG 10 
9KG C10 C7  C 0 1 N N N 843.657 -39.384 141.576 -5.795 -1.928 -0.060 C10 9KG 11 
9KG C11 C8  C 0 1 N N N 842.899 -38.177 141.847 -6.371 -0.867 -0.801 C11 9KG 12 
9KG C12 C9  C 0 1 N N N 843.190 -37.057 141.156 -5.565 -0.046 -1.507 C12 9KG 13 
9KG C13 C10 C 0 1 Y N N 843.633 -34.166 144.705 0.538  0.053  1.179  C13 9KG 14 
9KG C14 C11 C 0 1 Y N N 843.013 -35.065 145.569 0.904  -1.264 1.347  C14 9KG 15 
9KG C15 C12 C 0 1 Y N N 842.075 -34.603 146.539 2.023  -1.771 0.666  C15 9KG 16 
9KG C16 C13 C 0 1 Y N N 841.774 -33.204 146.602 2.767  -0.919 -0.190 C16 9KG 17 
9KG C17 C14 C 0 1 Y N N 842.430 -32.305 145.696 2.370  0.426  -0.344 C17 9KG 18 
9KG C18 C15 C 0 1 Y N N 843.335 -32.808 144.755 1.268  0.895  0.337  C18 9KG 19 
9KG C19 C16 C 0 1 Y N N 841.430 -35.495 147.443 2.417  -3.110 0.820  C19 9KG 20 
9KG C20 C17 C 0 1 Y N N 840.518 -35.033 148.387 3.526  -3.577 0.134  C20 9KG 21 
9KG C21 C18 C 0 1 Y N N 840.233 -33.675 148.449 4.255  -2.720 -0.711 C21 9KG 22 
9KG C22 C19 C 0 1 Y N N 840.834 -32.770 147.580 3.888  -1.423 -0.871 C22 9KG 23 
9KG C23 C20 C 0 1 N N N 839.874 -35.970 149.302 3.934  -4.941 0.287  C23 9KG 24 
9KG C24 C21 C 0 1 N N N 843.342 -36.554 145.490 0.105  -2.159 2.260  C24 9KG 25 
9KG C25 C22 C 0 1 N N N 842.750 -30.017 146.548 4.121  1.993  -0.691 C25 9KG 26 
9KG C26 C23 C 0 1 N N N 843.735 -30.495 147.504 4.881  2.891  -1.574 C26 9KG 27 
9KG C27 C24 C 0 1 N N N 841.149 -30.514 144.705 2.726  1.394  -2.596 C27 9KG 28 
9KG C28 C25 C 0 1 N N N 844.399 -29.655 148.321 5.898  3.597  -1.089 C28 9KG 29 
9KG C3  C26 C 0 1 Y N N 845.860 -34.401 143.613 -0.859 1.851  1.671  C3  9KG 30 
9KG C5  C27 C 0 1 Y N N 848.155 -34.037 144.331 -0.712 4.127  2.408  C5  9KG 31 
9KG C8  C28 C 0 1 N N N 844.470 -35.745 139.465 -3.336 0.645  -2.257 C8  9KG 32 
9KG O1  O1  O 0 1 N N N 844.511 -34.659 143.773 -0.548 0.537  1.835  O1  9KG 33 
9KG O2  O2  O 0 1 N N N 845.423 -34.378 141.198 -2.109 1.332  -0.292 O2  9KG 34 
9KG O3  O3  O 0 1 N N N 845.831 -38.134 139.048 -2.473 -1.426 -0.792 O3  9KG 35 
9KG O4  O4  O 0 1 N N N 843.475 -40.456 142.144 -6.502 -2.682 0.584  O4  9KG 36 
9KG O5  O5  O 0 1 N N N 842.468 -28.812 146.510 4.424  1.897  0.484  O5  9KG 37 
9KG H1  H1  H 0 1 N N N 845.148 -40.030 140.399 -4.056 -2.820 0.429  H1  9KG 38 
9KG H2  H2  H 0 1 N N N 846.513 -34.391 145.671 0.216  2.483  3.411  H2  9KG 39 
9KG H3  H3  H 0 1 N N N 849.597 -33.717 142.771 -1.739 5.570  1.213  H3  9KG 40 
9KG H4  H4  H 0 1 N N N 846.489 -35.870 140.251 -2.333 2.528  -1.961 H4  9KG 41 
9KG H5  H5  H 0 1 N N N 846.162 -34.401 139.271 -3.797 2.311  -0.972 H5  9KG 42 
9KG H6  H6  H 0 1 N N N 847.936 -33.930 140.958 -2.571 3.907  -0.400 H6  9KG 43 
9KG H7  H7  H 0 1 N N N 842.115 -38.176 142.590 -7.440 -0.716 -0.800 H7  9KG 44 
9KG H8  H8  H 0 1 N N N 842.621 -36.165 141.372 -5.985 0.769  -2.077 H8  9KG 45 
9KG H9  H9  H 0 1 N N N 843.809 -32.133 144.058 0.965  1.925  0.219  H9  9KG 46 
9KG H10 H10 H 0 1 N N N 841.653 -36.551 147.395 1.860  -3.770 1.469  H10 9KG 47 
9KG H11 H11 H 0 1 N N N 839.531 -33.315 149.186 5.118  -3.099 -1.238 H11 9KG 48 
9KG H12 H12 H 0 1 N N N 840.584 -31.722 147.648 4.457  -0.778 -1.524 H12 9KG 49 
9KG H13 H13 H 0 1 N N N 844.189 -36.779 146.155 -0.689 -2.642 1.690  H13 9KG 50 
9KG H14 H14 H 0 1 N N N 842.465 -37.140 145.802 0.759  -2.918 2.687  H14 9KG 51 
9KG H15 H15 H 0 1 N N N 843.609 -36.816 144.456 -0.333 -1.563 3.060  H15 9KG 52 
9KG H16 H16 H 0 1 N N N 843.940 -31.554 147.561 4.612  2.977  -2.616 H16 9KG 53 
9KG H17 H17 H 0 1 N N N 840.987 -29.428 144.765 3.279  0.654  -3.176 H17 9KG 54 
9KG H18 H18 H 0 1 N N N 841.504 -30.776 143.698 1.656  1.221  -2.711 H18 9KG 55 
9KG H19 H19 H 0 1 N N N 840.203 -31.037 144.908 2.973  2.394  -2.954 H19 9KG 56 
9KG H20 H20 H 0 1 N N N 845.125 -30.043 149.020 6.456  4.256  -1.738 H20 9KG 57 
9KG H21 H21 H 0 1 N N N 844.206 -28.593 148.277 6.167  3.511  -0.046 H21 9KG 58 
9KG H22 H22 H 0 1 N N N 848.880 -33.943 145.126 -0.350 4.860  3.114  H22 9KG 59 
9KG H23 H23 H 0 1 N N N 843.629 -35.045 139.575 -2.452 0.097  -2.584 H23 9KG 60 
9KG H24 H24 H 0 1 N N N 844.616 -35.979 138.400 -3.872 1.023  -3.128 H24 9KG 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9KG O3  C9  DOUB N N 1  
9KG C8  C7  SING N N 2  
9KG C8  N1  SING N N 3  
9KG C9  N1  SING N N 4  
9KG C9  N2  SING N N 5  
9KG C7  O2  SING N N 6  
9KG N1  C12 SING N N 7  
9KG N2  C10 SING N N 8  
9KG C12 C11 DOUB N N 9  
9KG O2  C2  SING N N 10 
9KG C10 C11 SING N N 11 
9KG C10 O4  DOUB N N 12 
9KG C1  C2  DOUB Y N 13 
9KG C1  C6  SING Y N 14 
9KG C2  C3  SING Y N 15 
9KG C6  C5  DOUB Y N 16 
9KG C3  O1  SING N N 17 
9KG C3  C4  DOUB Y N 18 
9KG O1  C13 SING N N 19 
9KG C5  C4  SING Y N 20 
9KG C13 C18 DOUB Y N 21 
9KG C13 C14 SING Y N 22 
9KG C27 N3  SING N N 23 
9KG C18 C17 SING Y N 24 
9KG C24 C14 SING N N 25 
9KG C14 C15 DOUB Y N 26 
9KG C17 N3  SING N N 27 
9KG C17 C16 DOUB Y N 28 
9KG N3  C25 SING N N 29 
9KG O5  C25 DOUB N N 30 
9KG C15 C16 SING Y N 31 
9KG C15 C19 SING Y N 32 
9KG C25 C26 SING N N 33 
9KG C16 C22 SING Y N 34 
9KG C19 C20 DOUB Y N 35 
9KG C26 C28 DOUB N N 36 
9KG C22 C21 DOUB Y N 37 
9KG C20 C21 SING Y N 38 
9KG C20 C23 SING N N 39 
9KG C23 N4  TRIP N N 40 
9KG N2  H1  SING N N 41 
9KG C4  H2  SING N N 42 
9KG C6  H3  SING N N 43 
9KG C7  H4  SING N N 44 
9KG C7  H5  SING N N 45 
9KG C1  H6  SING N N 46 
9KG C11 H7  SING N N 47 
9KG C12 H8  SING N N 48 
9KG C18 H9  SING N N 49 
9KG C19 H10 SING N N 50 
9KG C21 H11 SING N N 51 
9KG C22 H12 SING N N 52 
9KG C24 H13 SING N N 53 
9KG C24 H14 SING N N 54 
9KG C24 H15 SING N N 55 
9KG C26 H16 SING N N 56 
9KG C27 H17 SING N N 57 
9KG C27 H18 SING N N 58 
9KG C27 H19 SING N N 59 
9KG C28 H20 SING N N 60 
9KG C28 H21 SING N N 61 
9KG C5  H22 SING N N 62 
9KG C8  H23 SING N N 63 
9KG C8  H24 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9KG SMILES           ACDLabs              12.01 "N1(C=CC(NC1=O)=O)CCOc2c(cccc2)Oc3cc(N(C(\C=C)=O)C)c4c(c3C)cc(cc4)C#N"                                                                                                             
9KG InChI            InChI                1.03  "InChI=1S/C28H24N4O5/c1-4-27(34)31(3)22-16-25(18(2)21-15-19(17-29)9-10-20(21)22)37-24-8-6-5-7-23(24)36-14-13-32-12-11-26(33)30-28(32)35/h4-12,15-16H,1,13-14H2,2-3H3,(H,30,33,35)" 
9KG InChIKey         InChI                1.03  OFTCTICPJPOVAI-UHFFFAOYSA-N                                                                                                                                                        
9KG SMILES_CANONICAL CACTVS               3.385 "CN(C(=O)C=C)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N"                                                                                                                  
9KG SMILES           CACTVS               3.385 "CN(C(=O)C=C)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N"                                                                                                                  
9KG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)C=C)C#N"                                                                                                                    
9KG SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)C=C)C#N"                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9KG "SYSTEMATIC NAME" ACDLabs              12.01 "N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-N-methylprop-2-enamide"      
9KG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[3-[2-[2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]-6-cyano-4-methyl-naphthalen-1-yl]-~{N}-methyl-prop-2-enamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9KG "Create component" 2017-05-17 RCSB 
9KG "Initial release"  2017-08-23 RCSB 
# 
