data_8AG
#

_chem_comp.id                                   8AG
_chem_comp.name                                 "8-[ACETYL(ANTHRACEN-2-YL)AMINO]-2'-DEOXYGUANOSINE 5'-(DIHYDROGEN PHOSPHATE)"
_chem_comp.type                                 "DNA LINKING"
_chem_comp.pdbx_type                            ATOMN
_chem_comp.formula                              "C26 H27 N6 O8 P"
_chem_comp.mon_nstd_parent_comp_id              DG
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-06-07
_chem_comp.pdbx_modified_date                   2019-05-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       582.502
_chem_comp.one_letter_code                      G
_chem_comp.three_letter_code                    8AG
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2XGQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8AG  P       P       P  0  1  N  N  N  37.407  -31.371  -1.759  -5.689   2.908   1.173  P       8AG   1  
8AG  O2P     O2P     O  0  1  N  N  N  36.809  -30.137  -2.378  -6.808   3.404   0.341  O2P     8AG   2  
8AG  O1P     O1P     O  0  1  N  N  N  38.383  -32.179  -2.572  -5.202   4.074   2.170  O1P     8AG   3  
8AG  O3P     O3P     O  0  1  N  Y  N       ?        ?       ?  -6.181   1.638   2.032  O3P     8AG   4  
8AG  "O5'"   "O5'"   O  0  1  N  N  N  36.199  -32.329  -1.311  -4.466   2.470   0.221  "O5'"   8AG   5  
8AG  "C5'"   "C5'"   C  0  1  N  N  N  35.896  -33.480  -2.082  -4.607   1.528  -0.844  "C5'"   8AG   6  
8AG  "C4'"   "C4'"   C  0  1  N  N  R  34.781  -34.338  -1.487  -3.258   1.342  -1.542  "C4'"   8AG   7  
8AG  "O4'"   "O4'"   O  0  1  N  N  N  34.762  -34.398  -0.067  -2.309   0.712  -0.655  "O4'"   8AG   8  
8AG  "C3'"   "C3'"   C  0  1  N  N  S  33.379  -33.970  -1.915  -3.384   0.333  -2.712  "C3'"   8AG   9  
8AG  "O3'"   "O3'"   O  0  1  N  N  N  32.760  -35.231  -2.124  -3.802   0.990  -3.910  "O3'"   8AG  10  
8AG  "C2'"   "C2'"   C  0  1  N  N  N  32.765  -33.390  -0.665  -1.933  -0.190  -2.846  "C2'"   8AG  11  
8AG  "C1'"   "C1'"   C  0  1  N  N  R  33.426  -34.240   0.398  -1.291   0.122  -1.480  "C1'"   8AG  12  
8AG  N9      N9      N  0  1  N  N  N  33.528  -33.515   1.671  -0.806  -1.116  -0.864  N9      8AG  13  
8AG  C4      C4      C  0  1  N  N  N  33.825  -32.225   1.816  -1.587  -2.185  -0.456  C4      8AG  14  
8AG  N3      N3      N  0  1  N  N  N  34.045  -31.237   0.922  -2.916  -2.366  -0.510  N3      8AG  15  
8AG  C2      C2      C  0  1  N  N  N  34.318  -29.990   1.323  -3.474  -3.469  -0.064  C2      8AG  16  
8AG  N2      N2      N  0  1  N  N  N  34.559  -28.941   0.315  -4.837  -3.609  -0.140  N2      8AG  17  
8AG  N1      N1      N  0  1  N  N  N  34.382  -29.657   2.620  -2.732  -4.475   0.472  N1      8AG  18  
8AG  C6      C6      C  0  1  N  N  N  34.177  -30.569   3.573  -1.390  -4.354   0.555  C6      8AG  19  
8AG  O6      O6      O  0  1  N  N  N  34.245  -30.223   4.874  -0.714  -5.252   1.034  O6      8AG  20  
8AG  C5      C5      C  0  1  N  N  N  33.876  -31.951   3.171  -0.787  -3.180   0.081  C5      8AG  21  
8AG  N7      N7      N  0  1  N  N  N  33.630  -33.082   3.860   0.567  -2.782   0.038  N7      8AG  22  
8AG  C8      C8      C  0  1  N  N  S  33.413  -33.988   2.905   0.594  -1.447  -0.575  C8      8AG  23  
8AG  N29     N29     N  0  1  N  N  N  33.154  -35.378   3.320   1.161  -0.474   0.362  N29     8AG  24  
8AG  C30     C30     C  0  1  N  N  N  34.186  -36.292   3.381   0.348   0.349   1.054  C30     8AG  25  
8AG  C45     C45     C  0  1  N  N  N  33.827  -37.740   3.500   0.927   1.312   2.057  C45     8AG  26  
8AG  O44     O44     O  0  1  N  N  N  35.345  -35.924   3.340  -0.850   0.313   0.869  O44     8AG  27  
8AG  C32     C32     C  0  1  Y  N  N  31.787  -35.771   3.509   2.546  -0.398   0.539  C32     8AG  28  
8AG  C31     C31     C  0  1  Y  N  N  31.210  -36.837   2.837   3.159  -1.212   1.500  C31     8AG  29  
8AG  C36     C36     C  0  1  Y  N  N  29.910  -37.244   3.111   4.498  -1.180   1.712  C36     8AG  30  
8AG  C35     C35     C  0  1  Y  N  N  29.183  -36.611   4.102   5.305  -0.306   0.950  C35     8AG  31  
8AG  C34     C34     C  0  1  Y  N  N  29.819  -35.512   4.847   4.667   0.547  -0.058  C34     8AG  32  
8AG  C33     C33     C  0  1  Y  N  N  31.107  -35.147   4.540   3.270   0.462  -0.234  C33     8AG  33  
8AG  C1      C1      C  0  1  Y  N  N  27.880  -36.967   4.424   6.683  -0.250   1.145  C1      8AG  34  
8AG  C39     C39     C  0  1  Y  N  N  27.216  -36.284   5.435   7.452   0.623   0.377  C39     8AG  35  
8AG  C38     C38     C  0  1  Y  N  N  27.822  -35.252   6.125   6.814   1.477  -0.631  C38     8AG  36  
8AG  C37     C37     C  0  1  Y  N  N  29.116  -34.864   5.838   5.436   1.420  -0.826  C37     8AG  37  
8AG  C43     C43     C  0  1  Y  N  N  25.925  -36.637   5.764   8.851   0.706   0.549  C43     8AG  38  
8AG  C42     C42     C  0  1  Y  N  N  25.242  -35.976   6.771   9.569   1.567  -0.216  C42     8AG  39  
8AG  C40     C40     C  0  1  Y  N  N  27.142  -34.596   7.133   7.623   2.349  -1.391  C40     8AG  40  
8AG  C41     C41     C  0  1  Y  N  N  25.849  -34.947   7.463   8.962   2.380  -1.175  C41     8AG  41  
8AG  H1P     H1P     H  0  1  N  N  N  38.015  -32.349  -3.431  -5.889   4.387   2.774  H1P     8AG  42  
8AG  "H5'1"  "H5'1"  H  0  0  N  N  N  35.576  -33.148  -3.081  -4.942   0.572  -0.441  "H5'1"  8AG  43  
8AG  "H5'2"  "H5'2"  H  0  0  N  N  N  36.804  -34.101  -2.110  -5.339   1.897  -1.561  "H5'2"  8AG  44  
8AG  "H4'"   "H4'"   H  0  1  N  N  N  35.052  -35.318  -1.906  -2.876   2.299  -1.897  "H4'"   8AG  45  
8AG  "H3'"   "H3'"   H  0  1  N  N  N  33.303  -33.298  -2.783  -4.067  -0.477  -2.456  "H3'"   8AG  46  
8AG  "H1'"   "H1'"   H  0  1  N  N  N  32.863  -35.171   0.558  -0.466   0.822  -1.610  "H1'"   8AG  47  
8AG  "H2'1"  "H2'1"  H  0  0  N  N  N  32.988  -32.319  -0.545  -1.930  -1.264  -3.033  "H2'1"  8AG  48  
8AG  "H2'2"  "H2'2"  H  0  0  N  N  N  31.666  -33.418  -0.647  -1.409   0.338  -3.643  "H2'2"  8AG  49  
8AG  H21N    H21N    H  0  0  N  N  N  34.746  -28.081   0.789  -5.377  -2.898  -0.521  H21N    8AG  50  
8AG  H22N    H22N    H  0  0  N  N  N  34.539  -29.069  -0.677  -5.261  -4.418   0.186  H22N    8AG  51  
8AG  H1      H1      H  0  1  N  N  N  34.586  -28.712   2.877  -3.167  -5.280   0.795  H1      8AG  52  
8AG  H7      H7      H  0  1  N  N  N  34.406  -33.336   4.437   1.331  -3.292   0.350  H7      8AG  53  
8AG  H451    H451    H  0  0  N  N  N  33.739  -38.180   2.496   1.244   2.222   1.547  H451    8AG  54  
8AG  H452    H452    H  0  0  N  N  N  34.611  -38.267   4.064   0.171   1.559   2.803  H452    8AG  55  
8AG  H453    H453    H  0  0  N  N  N  32.867  -37.837   4.028   1.786   0.854   2.548  H453    8AG  56  
8AG  H31     H31     H  0  1  N  N  N  31.782  -37.361   2.086   2.549  -1.883   2.088  H31     8AG  57  
8AG  H33     H33     H  0  1  N  N  N  31.593  -34.367   5.108   2.776   1.077  -0.971  H33     8AG  58  
8AG  H36     H36     H  0  1  N  N  N  29.468  -38.054   2.550   4.945  -1.818   2.461  H36     8AG  59  
8AG  HA      HA      H  0  1  N  N  N  27.387  -37.768   3.893   7.153  -0.878   1.887  HA      8AG  60  
8AG  H37     H37     H  0  1  N  N  N  29.575  -34.056   6.388   4.966   2.049  -1.568  H37     8AG  61  
8AG  H43     H43     H  0  1  N  N  N  25.440  -37.440   5.229   9.346   0.089   1.284  H43     8AG  62  
8AG  H40     H40     H  0  1  N  N  N  27.630  -33.796   7.671   7.178   2.988  -2.139  H40     8AG  63  
8AG  H42     H42     H  0  1  N  N  N  24.231  -36.266   7.016  10.639   1.626  -0.079  H42     8AG  64  
8AG  H3A     H3A     H  0  1  N  N  N  32.622  -35.366  -3.054  -3.895   0.401  -4.670  H3A     8AG  65  
8AG  H41     H41     H  0  1  N  N  N  25.321  -34.426   8.248   9.575   3.050  -1.760  H41     8AG  66  
8AG  H88     H88     H  0  1  N  N  N  32.817  -34.736   2.361   1.175  -1.466  -1.497  H88     8AG  67  
8AG  H3P     H3P     H  0  1  N  N  N       ?        ?       ?  -5.497   1.260   2.602  H3P     8AG  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8AG  P      O2P     DOUB  N  N   1  
8AG  P      O1P     SING  N  N   2  
8AG  P      "O5'"   SING  N  N   3  
8AG  P      O3P     SING  N  N   4  
8AG  "O5'"  "C5'"   SING  N  N   5  
8AG  "C5'"  "C4'"   SING  N  N   6  
8AG  "C4'"  "O4'"   SING  N  N   7  
8AG  "C4'"  "C3'"   SING  N  N   8  
8AG  "O4'"  "C1'"   SING  N  N   9  
8AG  "C3'"  "O3'"   SING  N  N  10  
8AG  "C3'"  "C2'"   SING  N  N  11  
8AG  "O3'"  H3A     SING  N  N  12  
8AG  "C2'"  "C1'"   SING  N  N  13  
8AG  "C1'"  N9      SING  N  N  14  
8AG  N9     C4      SING  N  N  15  
8AG  N9     C8      SING  N  N  16  
8AG  C4     N3      SING  N  N  17  
8AG  C4     C5      DOUB  N  N  18  
8AG  N3     C2      DOUB  N  N  19  
8AG  C2     N2      SING  N  N  20  
8AG  C2     N1      SING  N  N  21  
8AG  N1     C6      SING  N  N  22  
8AG  C6     O6      DOUB  N  N  23  
8AG  C6     C5      SING  N  N  24  
8AG  C5     N7      SING  N  N  25  
8AG  N7     C8      SING  N  N  26  
8AG  C8     N29     SING  N  N  27  
8AG  N29    C30     SING  N  N  28  
8AG  N29    C32     SING  N  N  29  
8AG  C30    C45     SING  N  N  30  
8AG  C30    O44     DOUB  N  N  31  
8AG  C32    C31     SING  Y  N  32  
8AG  C32    C33     DOUB  Y  N  33  
8AG  C31    C36     DOUB  Y  N  34  
8AG  C36    C35     SING  Y  N  35  
8AG  C35    C34     SING  Y  N  36  
8AG  C35    C1      DOUB  Y  N  37  
8AG  C34    C33     SING  Y  N  38  
8AG  C34    C37     DOUB  Y  N  39  
8AG  C1     C39     SING  Y  N  40  
8AG  C39    C38     DOUB  Y  N  41  
8AG  C39    C43     SING  Y  N  42  
8AG  C38    C37     SING  Y  N  43  
8AG  C38    C40     SING  Y  N  44  
8AG  C40    C41     DOUB  Y  N  45  
8AG  C43    C42     DOUB  Y  N  46  
8AG  C42    C41     SING  Y  N  47  
8AG  O1P    H1P     SING  N  N  48  
8AG  "C5'"  "H5'1"  SING  N  N  49  
8AG  "C5'"  "H5'2"  SING  N  N  50  
8AG  "C4'"  "H4'"   SING  N  N  51  
8AG  "C3'"  "H3'"   SING  N  N  52  
8AG  "C1'"  "H1'"   SING  N  N  53  
8AG  "C2'"  "H2'1"  SING  N  N  54  
8AG  "C2'"  "H2'2"  SING  N  N  55  
8AG  N2     H21N    SING  N  N  56  
8AG  N2     H22N    SING  N  N  57  
8AG  N1     H1      SING  N  N  58  
8AG  N7     H7      SING  N  N  59  
8AG  C45    H451    SING  N  N  60  
8AG  C45    H452    SING  N  N  61  
8AG  C45    H453    SING  N  N  62  
8AG  C31    H31     SING  N  N  63  
8AG  C33    H33     SING  N  N  64  
8AG  C36    H36     SING  N  N  65  
8AG  C1     HA      SING  N  N  66  
8AG  C37    H37     SING  N  N  67  
8AG  C43    H43     SING  N  N  68  
8AG  C40    H40     SING  N  N  69  
8AG  C42    H42     SING  N  N  70  
8AG  C41    H41     SING  N  N  71  
8AG  C8     H88     SING  N  N  72  
8AG  O3P    H3P     SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8AG  SMILES            ACDLabs               10.04  "O=C(N(c3cc2cc1ccccc1cc2cc3)C5N(C=4N=C(N)NC(=O)C=4N5)C6OC(C(O)C6)COP(=O)(O)O)C"  
8AG  SMILES_CANONICAL  CACTVS                3.352  "CC(=O)N([C@H]1NC2=C(N=C(N)NC2=O)N1[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)c4ccc5cc6ccccc6cc5c4"  
8AG  SMILES            CACTVS                3.352  "CC(=O)N([CH]1NC2=C(N=C(N)NC2=O)N1[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)c4ccc5cc6ccccc6cc5c4"  
8AG  SMILES_CANONICAL  "OpenEye OEToolkits"  1.6.1  "CC(=O)N(c1ccc2cc3ccccc3cc2c1)C4NC5=C(N4[C@H]6C[C@@H]([C@H](O6)COP(=O)(O)O)O)N=C(NC5=O)N"  
8AG  SMILES            "OpenEye OEToolkits"  1.6.1  "CC(=O)N(c1ccc2cc3ccccc3cc2c1)C4NC5=C(N4C6CC(C(O6)COP(=O)(O)O)O)N=C(NC5=O)N"  
8AG  InChI             InChI                 1.03   "InChI=1S/C26H27N6O8P/c1-13(33)31(18-7-6-16-8-14-4-2-3-5-15(14)9-17(16)10-18)26-28-22-23(29-25(27)30-24(22)35)32(26)21-11-19(34)20(40-21)12-39-41(36,37)38/h2-10,19-21,26,28,34H,11-12H2,1H3,(H2,36,37,38)(H3,27,29,30,35)/t19-,20+,21+,26+/m0/s1"  
8AG  InChIKey          InChI                 1.03   OCECNASCCDEYBO-GQNXPXPTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
8AG  "SYSTEMATIC NAME"  ACDLabs               10.04  "8-[acetyl(anthracen-2-yl)amino]-2'-deoxyguanosine 5'-(dihydrogen phosphate)"  
8AG  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "[(2R,3S,5R)-5-[2-amino-8-(anthracen-2-yl-ethanoyl-amino)-6-oxo-7,8-dihydro-1H-purin-9-yl]-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8AG  "Create component"        2010-06-07  EBI   
8AG  "Modify aromatic_flag"    2011-06-04  RCSB  
8AG  "Modify descriptor"       2011-06-04  RCSB  
8AG  "Modify one letter code"  2019-05-03  EBI   
##
