data_6MG
# 
_chem_comp.id                                    6MG 
_chem_comp.name                                  "N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-[(2S)-2,3,3-trimethylbutyl]-L-leucinamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H38 N3 O5 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-09 
_chem_comp.pdbx_modified_date                    2016-12-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        455.528 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6MG 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JS3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6MG C2  C1  C 0 1 N N S 10.096 38.416 -3.565  -1.879 -0.820 0.398  C2  6MG 1  
6MG C3  C2  C 0 1 N N N 8.927  39.341 -3.868  -3.041 0.068  0.762  C3  6MG 2  
6MG C7  C3  C 0 1 N N N 6.724  43.557 -3.636  -7.425 1.930  -0.490 C7  6MG 3  
6MG C8  C4  C 0 1 N N N 7.541  44.723 -4.159  -8.447 1.924  -1.629 C8  6MG 4  
6MG C12 C5  C 0 1 N N N 5.937  44.115 -2.473  -6.895 3.351  -0.287 C12 6MG 5  
6MG C16 C6  C 0 1 N N N 5.753  43.081 -4.789  -8.094 1.447  0.798  C16 6MG 6  
6MG C20 C7  C 0 1 N N N 8.672  42.789 -2.170  -6.795 -0.423 -1.045 C20 6MG 7  
6MG O28 O1  O 0 1 N N N 7.764  38.938 -3.892  -3.045 0.658  1.821  O28 6MG 8  
6MG C30 C8  C 0 1 N N N 9.280  37.917 -1.184  -3.326 -2.477 -0.786 C30 6MG 9  
6MG C31 C9  C 0 1 N N N 9.129  36.399 -1.303  -2.595 -2.295 -2.118 C31 6MG 10 
6MG C35 C10 C 0 1 N N N 9.523  38.322 0.281   -3.915 -3.887 -0.716 C35 6MG 11 
6MG N1  N1  N 0 1 N N N 11.302 38.779 -4.303  -0.813 -0.665 1.398  N1  6MG 12 
6MG N4  N2  N 0 1 N N N 9.268  40.657 -4.065  -4.076 0.205  -0.091 N4  6MG 13 
6MG C5  C11 C 0 1 N N N 8.272  41.678 -4.386  -5.242 1.003  0.296  C5  6MG 14 
6MG C6  C12 C 0 1 N N S 7.642  42.361 -3.167  -6.264 0.998  -0.842 C6  6MG 15 
6MG C29 C13 C 0 1 N N N 10.417 38.453 -2.077  -2.341 -2.278 0.368  C29 6MG 16 
6MG P44 P1  P 0 1 N N N 11.514 38.490 -5.917  0.706  -0.806 0.686  P44 6MG 17 
6MG O45 O2  O 0 1 N N N 10.168 38.072 -6.505  0.912  0.311  -0.262 O45 6MG 18 
6MG C46 C14 C 0 1 N N N 11.982 40.115 -6.585  1.990  -0.750 1.979  C46 6MG 19 
6MG C50 C15 C 0 1 N N N 13.648 41.614 -10.834 5.943  1.354  0.196  C50 6MG 20 
6MG C51 C16 C 0 1 Y N N 15.005 41.197 -11.402 7.274  1.032  -0.433 C51 6MG 21 
6MG C52 C17 C 0 1 Y N N 15.106 40.687 -12.694 8.389  0.849  0.364  C52 6MG 22 
6MG C54 C18 C 0 1 Y N N 16.359 40.336 -13.211 9.610  0.554  -0.213 C54 6MG 23 
6MG C56 C19 C 0 1 Y N N 17.524 40.458 -12.444 9.716  0.442  -1.586 C56 6MG 24 
6MG C58 C20 C 0 1 Y N N 17.424 41.002 -11.157 8.601  0.624  -2.383 C58 6MG 25 
6MG C60 C21 C 0 1 Y N N 16.184 41.364 -10.641 7.379  0.914  -1.806 C60 6MG 26 
6MG O68 O3  O 0 1 N N N 12.593 37.493 -6.182  0.800  -2.205 -0.104 O68 6MG 27 
6MG N47 N3  N 0 1 N N N 12.007 40.028 -8.029  3.312  -0.873 1.360  N47 6MG 28 
6MG C48 C22 C 0 1 N N N 12.975 40.779 -8.747  4.021  0.233  1.060  C48 6MG 29 
6MG O49 O4  O 0 1 N N N 12.843 40.641 -10.158 5.236  0.120  0.491  O49 6MG 30 
6MG O64 O5  O 0 1 N N N 13.710 41.630 -8.203  3.564  1.332  1.304  O64 6MG 31 
6MG H1  H1  H 0 1 N N N 9.804  37.389 -3.831  -1.500 -0.538 -0.584 H1  6MG 32 
6MG H2  H2  H 0 1 N N N 8.226  45.073 -3.373  -8.825 0.912  -1.773 H2  6MG 33 
6MG H3  H3  H 0 1 N N N 8.123  44.399 -5.035  -9.274 2.589  -1.378 H3  6MG 34 
6MG H4  H4  H 0 1 N N N 6.867  45.542 -4.449  -7.970 2.269  -2.547 H4  6MG 35 
6MG H5  H5  H 0 1 N N N 6.630  44.440 -1.683  -6.418 3.695  -1.205 H5  6MG 36 
6MG H6  H6  H 0 1 N N N 5.340  44.974 -2.813  -7.722 4.015  -0.037 H6  6MG 37 
6MG H7  H7  H 0 1 N N N 5.268  43.337 -2.076  -6.167 3.354  0.524  H7  6MG 38 
6MG H8  H8  H 0 1 N N N 5.148  42.234 -4.433  -7.366 1.450  1.609  H8  6MG 39 
6MG H9  H9  H 0 1 N N N 5.090  43.910 -5.075  -8.922 2.111  1.049  H9  6MG 40 
6MG H10 H10 H 0 1 N N N 6.346  42.768 -5.661  -8.472 0.434  0.654  H10 6MG 41 
6MG H11 H11 H 0 1 N N N 8.177  43.273 -1.315  -7.523 -0.427 -1.856 H11 6MG 42 
6MG H12 H12 H 0 1 N N N 9.231  41.909 -1.820  -5.968 -1.087 -1.296 H12 6MG 43 
6MG H13 H13 H 0 1 N N N 9.366  43.500 -2.642  -7.271 -0.767 -0.127 H13 6MG 44 
6MG H14 H14 H 0 1 N N N 8.340  38.382 -1.515  -4.128 -1.743 -0.709 H14 6MG 45 
6MG H15 H15 H 0 1 N N N 8.310  36.059 -0.652  -1.846 -3.078 -2.231 H15 6MG 46 
6MG H16 H16 H 0 1 N N N 8.902  36.134 -2.346  -3.312 -2.356 -2.937 H16 6MG 47 
6MG H17 H17 H 0 1 N N N 10.067 35.912 -0.997  -2.107 -1.320 -2.134 H17 6MG 48 
6MG H18 H18 H 0 1 N N N 8.707  37.935 0.909   -3.113 -4.621 -0.793 H18 6MG 49 
6MG H19 H19 H 0 1 N N N 10.480 37.902 0.624   -4.436 -4.017 0.233  H19 6MG 50 
6MG H20 H20 H 0 1 N N N 9.556  39.419 0.357   -4.617 -4.029 -1.538 H20 6MG 51 
6MG H21 H21 H 0 1 N N N 12.055 38.310 -3.841  -0.923 -1.328 2.150  H21 6MG 52 
6MG H22 H22 H 0 1 N N N 10.228 40.925 -3.986  -4.048 -0.223 -0.960 H22 6MG 53 
6MG H23 H23 H 0 1 N N N 8.758  42.451 -4.999  -5.694 0.576  1.192  H23 6MG 54 
6MG H24 H24 H 0 1 N N N 7.468  41.202 -4.966  -4.931 2.027  0.500  H24 6MG 55 
6MG H25 H25 H 0 1 N N N 6.985  41.625 -2.680  -5.787 1.342  -1.760 H25 6MG 56 
6MG H26 H26 H 0 1 N N N 11.315 37.842 -1.900  -1.478 -2.930 0.225  H26 6MG 57 
6MG H27 H27 H 0 1 N N N 10.621 39.496 -1.792  -2.830 -2.524 1.310  H27 6MG 58 
6MG H28 H28 H 0 1 N N N 12.978 40.396 -6.213  1.926  0.197  2.514  H28 6MG 59 
6MG H29 H29 H 0 1 N N N 11.247 40.871 -6.272  1.838  -1.573 2.678  H29 6MG 60 
6MG H30 H30 H 0 1 N N N 13.836 42.428 -10.119 6.102  1.911  1.119  H30 6MG 61 
6MG H31 H31 H 0 1 N N N 13.051 41.996 -11.676 5.351  1.956  -0.494 H31 6MG 62 
6MG H32 H32 H 0 1 N N N 14.219 40.562 -13.297 8.305  0.936  1.437  H32 6MG 63 
6MG H33 H33 H 0 1 N N N 16.428 39.963 -14.222 10.481 0.412  0.410  H33 6MG 64 
6MG H34 H34 H 0 1 N N N 18.479 40.140 -12.836 10.670 0.212  -2.037 H34 6MG 65 
6MG H35 H35 H 0 1 N N N 18.315 41.141 -10.562 8.684  0.537  -3.456 H35 6MG 66 
6MG H36 H36 H 0 1 N N N 16.121 41.778 -9.646  6.507  1.053  -2.428 H36 6MG 67 
6MG H37 H37 H 0 1 N N N 12.237 36.765 -6.679  0.601  -2.979 0.440  H37 6MG 68 
6MG H38 H38 H 0 1 N N N 11.353 39.448 -8.514  3.677  -1.751 1.166  H38 6MG 69 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6MG C54 C52 DOUB Y N 1  
6MG C54 C56 SING Y N 2  
6MG C52 C51 SING Y N 3  
6MG C56 C58 DOUB Y N 4  
6MG C51 C50 SING N N 5  
6MG C51 C60 DOUB Y N 6  
6MG C58 C60 SING Y N 7  
6MG C50 O49 SING N N 8  
6MG O49 C48 SING N N 9  
6MG C48 O64 DOUB N N 10 
6MG C48 N47 SING N N 11 
6MG N47 C46 SING N N 12 
6MG C46 P44 SING N N 13 
6MG O45 P44 DOUB N N 14 
6MG O68 P44 SING N N 15 
6MG P44 N1  SING N N 16 
6MG C16 C7  SING N N 17 
6MG C5  N4  SING N N 18 
6MG C5  C6  SING N N 19 
6MG N1  C2  SING N N 20 
6MG C8  C7  SING N N 21 
6MG N4  C3  SING N N 22 
6MG O28 C3  DOUB N N 23 
6MG C3  C2  SING N N 24 
6MG C7  C6  SING N N 25 
6MG C7  C12 SING N N 26 
6MG C2  C29 SING N N 27 
6MG C6  C20 SING N N 28 
6MG C29 C30 SING N N 29 
6MG C31 C30 SING N N 30 
6MG C30 C35 SING N N 31 
6MG C2  H1  SING N N 32 
6MG C8  H2  SING N N 33 
6MG C8  H3  SING N N 34 
6MG C8  H4  SING N N 35 
6MG C12 H5  SING N N 36 
6MG C12 H6  SING N N 37 
6MG C12 H7  SING N N 38 
6MG C16 H8  SING N N 39 
6MG C16 H9  SING N N 40 
6MG C16 H10 SING N N 41 
6MG C20 H11 SING N N 42 
6MG C20 H12 SING N N 43 
6MG C20 H13 SING N N 44 
6MG C30 H14 SING N N 45 
6MG C31 H15 SING N N 46 
6MG C31 H16 SING N N 47 
6MG C31 H17 SING N N 48 
6MG C35 H18 SING N N 49 
6MG C35 H19 SING N N 50 
6MG C35 H20 SING N N 51 
6MG N1  H21 SING N N 52 
6MG N4  H22 SING N N 53 
6MG C5  H23 SING N N 54 
6MG C5  H24 SING N N 55 
6MG C6  H25 SING N N 56 
6MG C29 H26 SING N N 57 
6MG C29 H27 SING N N 58 
6MG C46 H28 SING N N 59 
6MG C46 H29 SING N N 60 
6MG C50 H30 SING N N 61 
6MG C50 H31 SING N N 62 
6MG C52 H32 SING N N 63 
6MG C54 H33 SING N N 64 
6MG C56 H34 SING N N 65 
6MG C58 H35 SING N N 66 
6MG C60 H36 SING N N 67 
6MG O68 H37 SING N N 68 
6MG N47 H38 SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6MG SMILES           ACDLabs              12.01 "C(CC(C)C)(C(=O)NCC(C(C)(C)C)C)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                  
6MG InChI            InChI                1.03  "InChI=1S/C22H38N3O5P/c1-16(2)12-19(20(26)23-13-17(3)22(4,5)6)25-31(28,29)15-24-21(27)30-14-18-10-8-7-9-11-18/h7-11,16-17,19H,12-15H2,1-6H3,(H,23,26)(H,24,27)(H2,25,28,29)/t17-,19+/m1/s1" 
6MG InChIKey         InChI                1.03  XXIXMIAOXNBYOY-MJGOQNOKSA-N                                                                                                                                                                 
6MG SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)NC[C@@H](C)C(C)(C)C"                                                                                                                         
6MG SMILES           CACTVS               3.385 "CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)NC[CH](C)C(C)(C)C"                                                                                                                            
6MG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C[C@H](CNC(=O)[C@H](CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O)C(C)(C)C"                                                                                                                            
6MG SMILES           "OpenEye OEToolkits" 2.0.4 "CC(C)CC(C(=O)NCC(C)C(C)(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6MG "SYSTEMATIC NAME" ACDLabs              12.01 "N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-[(2S)-2,3,3-trimethylbutyl]-L-leucinamide"                                   
6MG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-2,3,3-trimethylbutyl]amino]pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6MG "Create component" 2016-05-09 EBI  
6MG "Initial release"  2016-12-21 RCSB 
# 
