data_JHF
# 
_chem_comp.id                                    JHF 
_chem_comp.name                                  "(6S)-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3R)-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]-1-(3-fluoranyl-4-methoxy-phenyl)piperidin-2-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H32 F N5 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-21 
_chem_comp.pdbx_modified_date                    2022-07-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        581.658 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JHF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7XHE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JHF CBJ C1  C 0 1 N N N 8.260  -8.517 -8.328  4.683  3.000  -3.353 CBJ JHF 1  
JHF OBI O1  O 0 1 N N N 7.230  -7.524 -8.180  4.364  3.183  -1.972 OBI JHF 2  
JHF CBE C2  C 0 1 Y N N 6.873  -6.879 -9.350  4.055  2.068  -1.257 CBE JHF 3  
JHF CBF C3  C 0 1 Y N N 5.924  -5.879 -9.182  3.735  2.174  0.091  CBF JHF 4  
JHF FBH F1  F 0 1 N N N 5.531  -5.540 -7.933  3.730  3.384  0.691  FBH JHF 5  
JHF CBG C4  C 0 1 Y N N 5.504  -5.163 -10.312 3.421  1.040  0.817  CBG JHF 6  
JHF CBD C5  C 0 1 Y N N 7.312  -7.231 -10.660 4.055  0.827  -1.875 CBD JHF 7  
JHF CBC C6  C 0 1 Y N N 6.878  -6.496 -11.768 3.735  -0.306 -1.151 CBC JHF 8  
JHF CBB C7  C 0 1 Y N N 5.961  -5.467 -11.605 3.426  -0.203 0.199  CBB JHF 9  
JHF NBA N1  N 0 1 N N N 5.555  -4.709 -12.691 3.102  -1.352 0.933  NBA JHF 10 
JHF CAZ C8  C 0 1 N N N 4.347  -4.995 -13.227 3.949  -1.745 1.885  CAZ JHF 11 
JHF OBK O2  O 0 1 N N N 3.670  -5.852 -12.669 4.973  -1.113 2.038  OBK JHF 12 
JHF CAY C9  C 0 1 N N N 3.846  -4.244 -14.341 3.703  -2.927 2.777  CAY JHF 13 
JHF CAX C10 C 0 1 N N N 4.999  -3.927 -15.234 2.626  -3.826 2.165  CAX JHF 14 
JHF CAW C11 C 0 1 N N N 6.003  -2.901 -14.594 1.434  -2.949 1.763  CAW JHF 15 
JHF CAR C12 C 0 1 N N S 6.573  -3.705 -13.333 1.858  -2.039 0.612  CAR JHF 16 
JHF CAO C13 C 0 1 Y N N 7.176  -2.788 -12.350 0.774  -1.025 0.353  CAO JHF 17 
JHF NAP N2  N 0 1 Y N N 6.525  -1.828 -11.688 0.533  0.015  1.097  NAP JHF 18 
JHF CAL C14 C 0 1 Y N N 7.416  -1.226 -10.845 -0.508 0.716  0.579  CAL JHF 19 
JHF CAM C15 C 0 1 Y N N 7.288  -0.174 -9.967  -1.168 1.885  0.965  CAM JHF 20 
JHF CAF C16 C 0 1 Y N N 8.329  0.311  -9.179  -2.225 2.356  0.201  CAF JHF 21 
JHF CAA C17 C 0 1 Y N N 8.154  1.365  -8.286  -2.931 3.599  0.604  CAA JHF 22 
JHF CAE C18 C 0 1 Y N N 7.532  2.548  -8.558  -3.673 3.821  1.729  CAE JHF 23 
JHF CAG C19 C 0 1 N N N 6.907  3.004  -9.844  -3.949 2.839  2.839  CAG JHF 24 
JHF OAD O3  O 0 1 Y N N 7.501  3.320  -7.496  -4.105 5.087  1.650  OAD JHF 25 
JHF NAC N3  N 0 1 Y N N 8.212  2.540  -6.408  -3.721 5.631  0.641  NAC JHF 26 
JHF CAB C20 C 0 1 Y N N 8.533  1.414  -6.970  -2.990 4.841  -0.088 CAB JHF 27 
JHF CAH C21 C 0 1 N N N 9.270  0.414  -6.158  -2.337 5.173  -1.405 CAH JHF 28 
JHF CAI C22 C 0 1 Y N N 9.581  -0.325 -9.329  -2.629 1.667  -0.946 CAI JHF 29 
JHF CAJ C23 C 0 1 Y N N 9.680  -1.365 -10.273 -1.988 0.523  -1.328 CAJ JHF 30 
JHF CAK C24 C 0 1 Y N N 8.627  -1.815 -10.986 -0.926 0.034  -0.577 CAK JHF 31 
JHF NAN N4  N 0 1 Y N N 8.487  -2.793 -11.962 -0.092 -1.060 -0.696 NAN JHF 32 
JHF CAQ C25 C 0 1 N N R 9.620  -3.718 -12.379 -0.133 -2.073 -1.754 CAQ JHF 33 
JHF CAV C26 C 0 1 N N N 10.707 -2.939 -12.950 -0.712 -3.408 -1.222 CAV JHF 34 
JHF CAS C27 C 0 1 N N N 10.143 -4.589 -11.231 -1.171 -1.696 -2.844 CAS JHF 35 
JHF CAT C28 C 0 1 N N N 11.658 -4.620 -11.425 -2.502 -2.189 -2.239 CAT JHF 36 
JHF NAU N5  N 0 1 N N N 11.870 -3.736 -12.572 -2.174 -3.221 -1.244 NAU JHF 37 
JHF SBL S1  S 0 1 N N N 13.405 -2.956 -12.915 -3.266 -4.038 -0.305 SBL JHF 38 
JHF OBM O4  O 0 1 N N N 14.379 -3.245 -11.816 -4.436 -4.109 -1.109 OBM JHF 39 
JHF OBN O5  O 0 1 N N N 13.213 -1.516 -13.359 -2.577 -5.215 0.090  OBN JHF 40 
JHF CBO C29 C 0 1 N N N 13.877 -3.927 -14.362 -3.539 -2.951 1.121  CBO JHF 41 
JHF H1  H1  H 0 1 N N N 8.474  -8.972 -7.350  5.550  2.346  -3.442 H1  JHF 42 
JHF H2  H2  H 0 1 N N N 7.921  -9.295 -9.028  3.834  2.549  -3.866 H2  JHF 43 
JHF H3  H3  H 0 1 N N N 9.172  -8.043 -8.720  4.909  3.966  -3.805 H3  JHF 44 
JHF H4  H4  H 0 1 N N N 4.805  -4.350 -10.184 3.173  1.122  1.865  H4  JHF 45 
JHF H5  H5  H 0 1 N N N 7.981  -8.067 -10.797 4.304  0.745  -2.922 H5  JHF 46 
JHF H6  H6  H 0 1 N N N 7.257  -6.730 -12.752 3.739  -1.273 -1.632 H6  JHF 47 
JHF H7  H7  H 0 1 N N N 3.381  -3.313 -13.985 4.627  -3.495 2.889  H7  JHF 48 
JHF H8  H8  H 0 1 N N N 3.101  -4.840 -14.889 3.371  -2.580 3.755  H8  JHF 49 
JHF H9  H9  H 0 1 N N N 4.611  -3.501 -16.171 3.026  -4.327 1.284  H9  JHF 50 
JHF H10 H10 H 0 1 N N N 5.541  -4.859 -15.452 2.305  -4.568 2.896  H10 JHF 51 
JHF H11 H11 H 0 1 N N N 6.809  -2.643 -15.297 0.605  -3.581 1.445  H11 JHF 52 
JHF H12 H12 H 0 1 N N N 5.485  -1.984 -14.278 1.126  -2.338 2.612  H12 JHF 53 
JHF H13 H13 H 0 1 N N N 7.391  -4.325 -13.729 2.006  -2.640 -0.286 H13 JHF 54 
JHF H14 H14 H 0 1 N N N 6.323  0.304  -9.884  -0.856 2.417  1.851  H14 JHF 55 
JHF H15 H15 H 0 1 N N N 6.473  4.006  -9.707  -3.172 2.922  3.599  H15 JHF 56 
JHF H16 H16 H 0 1 N N N 7.674  3.042  -10.631 -4.919 3.059  3.285  H16 JHF 57 
JHF H17 H17 H 0 1 N N N 6.115  2.299  -10.137 -3.956 1.827  2.434  H17 JHF 58 
JHF H18 H18 H 0 1 N N N 9.436  0.813  -5.146  -3.022 4.937  -2.220 H18 JHF 59 
JHF H19 H19 H 0 1 N N N 8.681  -0.513 -6.094  -2.093 6.235  -1.432 H19 JHF 60 
JHF H20 H20 H 0 1 N N N 10.240 0.200  -6.632  -1.424 4.588  -1.516 H20 JHF 61 
JHF H21 H21 H 0 1 N N N 10.434 -0.024 -8.739  -3.453 2.042  -1.534 H21 JHF 62 
JHF H22 H22 H 0 1 N N N 10.644 -1.824 -10.434 -2.307 -0.004 -2.216 H22 JHF 63 
JHF H23 H23 H 0 1 N N N 9.230  -4.393 -13.155 0.855  -2.221 -2.189 H23 JHF 64 
JHF H24 H24 H 0 1 N N N 10.752 -1.931 -12.512 -0.425 -4.232 -1.874 H24 JHF 65 
JHF H25 H25 H 0 1 N N N 10.613 -2.860 -14.043 -0.369 -3.591 -0.204 H25 JHF 66 
JHF H26 H26 H 0 1 N N N 9.886  -4.144 -10.258 -1.194 -0.617 -2.998 H26 JHF 67 
JHF H27 H27 H 0 1 N N N 9.723  -5.604 -11.292 -0.953 -2.213 -3.778 H27 JHF 68 
JHF H28 H28 H 0 1 N N N 12.006 -5.640 -11.644 -3.020 -1.360 -1.757 H28 JHF 69 
JHF H29 H29 H 0 1 N N N 12.177 -4.239 -10.533 -3.131 -2.613 -3.023 H29 JHF 70 
JHF H30 H30 H 0 1 N N N 14.023 -4.977 -14.068 -3.849 -1.965 0.773  H30 JHF 71 
JHF H31 H31 H 0 1 N N N 13.082 -3.866 -15.120 -4.319 -3.373 1.756  H31 JHF 72 
JHF H32 H32 H 0 1 N N N 14.814 -3.530 -14.780 -2.615 -2.861 1.692  H32 JHF 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JHF CAX CAW SING N N 1  
JHF CAX CAY SING N N 2  
JHF CAW CAR SING N N 3  
JHF CBO SBL SING N N 4  
JHF CAY CAZ SING N N 5  
JHF OBN SBL DOUB N N 6  
JHF CAR NBA SING N N 7  
JHF CAR CAO SING N N 8  
JHF CAZ NBA SING N N 9  
JHF CAZ OBK DOUB N N 10 
JHF CAV NAU SING N N 11 
JHF CAV CAQ SING N N 12 
JHF SBL NAU SING N N 13 
JHF SBL OBM DOUB N N 14 
JHF NBA CBB SING N N 15 
JHF NAU CAT SING N N 16 
JHF CAQ NAN SING N N 17 
JHF CAQ CAS SING N N 18 
JHF CAO NAN SING Y N 19 
JHF CAO NAP DOUB Y N 20 
JHF NAN CAK SING Y N 21 
JHF CBC CBB DOUB Y N 22 
JHF CBC CBD SING Y N 23 
JHF NAP CAL SING Y N 24 
JHF CBB CBG SING Y N 25 
JHF CAT CAS SING N N 26 
JHF CAK CAL DOUB Y N 27 
JHF CAK CAJ SING Y N 28 
JHF CAL CAM SING Y N 29 
JHF CBD CBE DOUB Y N 30 
JHF CBG CBF DOUB Y N 31 
JHF CAJ CAI DOUB Y N 32 
JHF CAM CAF DOUB Y N 33 
JHF CAG CAE SING N N 34 
JHF CBE CBF SING Y N 35 
JHF CBE OBI SING N N 36 
JHF CAI CAF SING Y N 37 
JHF CBF FBH SING N N 38 
JHF CAF CAA SING N N 39 
JHF CAE CAA DOUB Y N 40 
JHF CAE OAD SING Y N 41 
JHF CBJ OBI SING N N 42 
JHF CAA CAB SING Y N 43 
JHF OAD NAC SING Y N 44 
JHF CAB NAC DOUB Y N 45 
JHF CAB CAH SING N N 46 
JHF CBJ H1  SING N N 47 
JHF CBJ H2  SING N N 48 
JHF CBJ H3  SING N N 49 
JHF CBG H4  SING N N 50 
JHF CBD H5  SING N N 51 
JHF CBC H6  SING N N 52 
JHF CAY H7  SING N N 53 
JHF CAY H8  SING N N 54 
JHF CAX H9  SING N N 55 
JHF CAX H10 SING N N 56 
JHF CAW H11 SING N N 57 
JHF CAW H12 SING N N 58 
JHF CAR H13 SING N N 59 
JHF CAM H14 SING N N 60 
JHF CAG H15 SING N N 61 
JHF CAG H16 SING N N 62 
JHF CAG H17 SING N N 63 
JHF CAH H18 SING N N 64 
JHF CAH H19 SING N N 65 
JHF CAH H20 SING N N 66 
JHF CAI H21 SING N N 67 
JHF CAJ H22 SING N N 68 
JHF CAQ H23 SING N N 69 
JHF CAV H24 SING N N 70 
JHF CAV H25 SING N N 71 
JHF CAS H26 SING N N 72 
JHF CAS H27 SING N N 73 
JHF CAT H28 SING N N 74 
JHF CAT H29 SING N N 75 
JHF CBO H30 SING N N 76 
JHF CBO H31 SING N N 77 
JHF CBO H32 SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JHF InChI            InChI                1.03  "InChI=1S/C29H32FN5O5S/c1-17-28(18(2)40-32-17)19-8-10-24-23(14-19)31-29(35(24)21-12-13-33(16-21)41(4,37)38)25-6-5-7-27(36)34(25)20-9-11-26(39-3)22(30)15-20/h8-11,14-15,21,25H,5-7,12-13,16H2,1-4H3/t21-,25+/m1/s1" 
JHF InChIKey         InChI                1.03  IXWWSEVQKVTANB-BWKNWUBXSA-N                                                                                                                                                                                         
JHF SMILES_CANONICAL CACTVS               3.385 "COc1ccc(cc1F)N2[C@@H](CCCC2=O)c3nc4cc(ccc4n3[C@@H]5CCN(C5)[S](C)(=O)=O)c6c(C)onc6C"                                                                                                                                
JHF SMILES           CACTVS               3.385 "COc1ccc(cc1F)N2[CH](CCCC2=O)c3nc4cc(ccc4n3[CH]5CCN(C5)[S](C)(=O)=O)c6c(C)onc6C"                                                                                                                                    
JHF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(on1)C)c2ccc3c(c2)nc(n3[C@@H]4CCN(C4)S(=O)(=O)C)[C@@H]5CCCC(=O)N5c6ccc(c(c6)F)OC"                                                                                                                            
JHF SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(c(on1)C)c2ccc3c(c2)nc(n3C4CCN(C4)S(=O)(=O)C)C5CCCC(=O)N5c6ccc(c(c6)F)OC"                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           JHF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(6~{S})-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3~{R})-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]-1-(3-fluoranyl-4-methoxy-phenyl)piperidin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JHF "Create component" 2022-04-21 PDBJ 
JHF "Initial release"  2022-07-27 RCSB 
# 
