data_YGE
# 
_chem_comp.id                                    YGE 
_chem_comp.name                                  "(4-cyano-2-ethoxyphenyl)methyl (3aR,6aS)-5-(1H-benzotriazole-5-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H24 N6 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-13 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        460.485 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YGE 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G5S 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YGE C11 C1  C 0 1 N N N N N N -10.962 12.827 51.465 4.985   1.591  0.261  C11 YGE 1  
YGE C15 C2  C 0 1 Y N N N N N -7.421  13.757 52.403 5.569   -2.083 0.704  C15 YGE 2  
YGE C16 C3  C 0 1 Y N N N N N -9.261  11.532 52.870 6.972   0.169  -0.171 C16 YGE 3  
YGE C17 C4  C 0 1 Y N N N N N -7.954  11.549 53.405 7.598   -1.081 -0.176 C17 YGE 4  
YGE C18 C5  C 0 1 Y N N N N N -7.047  12.648 53.178 6.886   -2.211 0.267  C18 YGE 5  
YGE C22 C6  C 0 1 N N N N N N -14.245 7.798  47.648 -2.097  2.039  -0.150 C22 YGE 6  
YGE C25 C7  C 0 1 N N N N N N -13.790 5.978  46.157 -4.282  1.086  -0.034 C25 YGE 7  
YGE C26 C8  C 0 1 Y N N N N N -12.836 5.164  45.280 -4.947  -0.266 -0.041 C26 YGE 8  
YGE C27 C9  C 0 1 Y N N N N N -11.989 5.743  44.243 -6.329  -0.358 0.053  C27 YGE 9  
YGE C28 C10 C 0 1 Y N N N N N -11.177 4.903  43.459 -6.944  -1.599 0.047  C28 YGE 10 
YGE N1  N1  N 0 1 N N N N N N -11.569 11.950 50.579 3.663   1.674  0.011  N1  YGE 11 
YGE C2  C11 C 0 1 N N N N N N -10.912 10.704 50.057 2.867   2.936  -0.114 C2  YGE 12 
YGE C3  C12 C 0 1 N N N N N N -13.081 11.863 50.464 2.732   0.525  -0.197 C3  YGE 13 
YGE C4  C13 C 0 1 N N S N N N -13.268 10.405 50.048 1.441   1.157  -0.606 C4  YGE 14 
YGE C5  C14 C 0 1 N N S N N N -12.025 10.249 49.122 1.474   2.479  0.262  C5  YGE 15 
YGE C6  C15 C 0 1 N N N N N N -12.227 8.849  48.607 0.202   3.105  -0.270 C6  YGE 16 
YGE N7  N2  N 0 1 N N N N N N -13.663 8.916  48.271 -0.756  1.955  -0.248 N7  YGE 17 
YGE C8  C16 C 0 1 N N N N N N -14.418 9.840  49.191 0.041   0.696  -0.355 C8  YGE 18 
YGE C12 C17 C 0 1 Y N N N N N -9.606  12.636 52.091 5.655   0.274  0.259  C12 YGE 19 
YGE O13 O1  O 0 1 N N N N N N -11.608 13.827 51.786 5.627   2.599  0.482  O13 YGE 20 
YGE C14 C18 C 0 1 Y N N N N N -8.701  13.732 51.885 4.963   -0.862 0.701  C14 YGE 21 
YGE N19 N3  N 0 1 Y N N N N N -5.867  12.317 53.870 7.747   -3.274 0.148  N19 YGE 22 
YGE N20 N4  N 0 1 Y N N N N N -6.054  11.116 54.466 8.950   -2.762 -0.359 N20 YGE 23 
YGE N21 N5  N 0 1 Y N N N N N -7.247  10.642 54.202 8.836   -1.493 -0.537 N21 YGE 24 
YGE O23 O2  O 0 1 N N N N N N -15.435 7.451  47.778 -2.633  3.127  -0.069 O23 YGE 25 
YGE O24 O3  O 0 1 N N N N N N -13.310 7.116  46.838 -2.844  0.919  -0.142 O24 YGE 26 
YGE C29 C19 C 0 1 Y N N N N N -11.206 3.519  43.691 -6.169  -2.755 -0.055 C29 YGE 27 
YGE C30 C20 C 0 1 Y N N N N N -12.006 2.946  44.658 -4.780  -2.653 -0.149 C30 YGE 28 
YGE C31 C21 C 0 1 Y N N N N N -12.810 3.776  45.435 -4.179  -1.411 -0.147 C31 YGE 29 
YGE O32 O4  O 0 1 N N N N N N -12.027 7.112  44.081 -7.080  0.771  0.151  O32 YGE 30 
YGE C33 C22 C 0 1 N N N N N N -11.182 7.664  43.056 -8.495  0.603  0.244  C33 YGE 31 
YGE C34 C23 C 0 1 N N N N N N -11.145 9.164  43.336 -9.166  1.974  0.347  C34 YGE 32 
YGE C35 C24 C 0 1 N N N N N N -10.402 2.676  42.906 -6.797  -4.042 -0.061 C35 YGE 33 
YGE N36 N6  N 0 1 N N N N N N -9.747  1.969  42.277 -7.295  -5.063 -0.066 N36 YGE 34 
YGE H46 H1  H 0 1 N N N N N N -6.747  14.582 52.222 5.027   -2.953 1.042  H46 YGE 35 
YGE H47 H2  H 0 1 N N N N N N -9.947  10.718 53.052 7.506   1.045  -0.508 H47 YGE 36 
YGE H49 H3  H 0 1 N N N N N N -14.186 5.292  46.920 -4.644  1.674  -0.878 H49 YGE 37 
YGE H50 H4  H 0 1 N N N N N N -14.611 6.317  45.507 -4.519  1.603  0.896  H50 YGE 38 
YGE H51 H5  H 0 1 N N N N N N -10.541 5.317  42.690 -8.019  -1.671 0.120  H51 YGE 39 
YGE H38 H6  H 0 1 N N N N N N -9.978  10.921 49.518 3.227   3.692  0.583  H38 YGE 40 
YGE H37 H7  H 0 1 N N N N N N -10.714 9.973  50.855 2.890   3.309  -1.138 H37 YGE 41 
YGE H39 H8  H 0 1 N N N N N N -13.570 12.073 51.427 3.103   -0.127 -0.987 H39 YGE 42 
YGE H40 H9  H 0 1 N N N N N N -13.467 12.552 49.699 2.605   -0.034 0.730  H40 YGE 43 
YGE H10 H10 H 0 1 N N N N N N -13.132 9.761  50.929 1.514   1.449  -1.654 H10 YGE 44 
YGE H9  H11 H 0 1 N N N N N N -12.112 10.962 48.289 1.402   2.266  1.328  H9  YGE 45 
YGE H42 H12 H 0 1 N N N N N N -11.608 8.645  47.721 -0.139  3.906  0.386  H42 YGE 46 
YGE H41 H13 H 0 1 N N N N N N -12.022 8.094  49.380 0.346   3.470  -1.287 H41 YGE 47 
YGE H43 H14 H 0 1 N N N N N N -15.148 9.292  49.805 -0.315  0.090  -1.188 H43 YGE 48 
YGE H44 H15 H 0 1 N N N N N N -14.933 10.635 48.632 -0.012  0.132  0.577  H44 YGE 49 
YGE H45 H16 H 0 1 N N N N N N -9.037  14.575 51.299 3.942   -0.770 1.042  H45 YGE 50 
YGE H48 H17 H 0 1 N N N N N N -5.036  12.872 53.914 7.559   -4.199 0.372  H48 YGE 51 
YGE H52 H18 H 0 1 N N N N N N -12.009 1.877  44.809 -4.176  -3.545 -0.227 H52 YGE 52 
YGE H53 H19 H 0 1 N N N N N N -13.440 3.328  46.189 -3.104  -1.333 -0.224 H53 YGE 53 
YGE H54 H20 H 0 1 N N N N N N -10.171 7.235  43.116 -8.859  0.086  -0.644 H54 YGE 54 
YGE H55 H21 H 0 1 N N N N N N -11.605 7.467  42.060 -8.734  0.015  1.130  H55 YGE 55 
YGE H57 H22 H 0 1 N N N N N N -10.512 9.662  42.587 -10.247 1.846  0.418  H57 YGE 56 
YGE H56 H23 H 0 1 N N N N N N -12.165 9.572  43.283 -8.803  2.491  1.235  H56 YGE 57 
YGE H58 H24 H 0 1 N N N N N N -10.731 9.339  44.340 -8.928  2.563  -0.539 H58 YGE 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YGE N1  C2  SING N N 1  
YGE N1  C3  SING N N 2  
YGE N1  C11 SING N N 3  
YGE C2  C5  SING N N 4  
YGE C3  C4  SING N N 5  
YGE C4  C5  SING N N 6  
YGE C4  C8  SING N N 7  
YGE C5  C6  SING N N 8  
YGE C6  N7  SING N N 9  
YGE N7  C8  SING N N 10 
YGE N7  C22 SING N N 11 
YGE C11 C12 SING N N 12 
YGE C11 O13 DOUB N N 13 
YGE C12 C14 DOUB Y N 14 
YGE C12 C16 SING Y N 15 
YGE C14 C15 SING Y N 16 
YGE C15 C18 DOUB Y N 17 
YGE C16 C17 DOUB Y N 18 
YGE C17 C18 SING Y N 19 
YGE C17 N21 SING Y N 20 
YGE C18 N19 SING Y N 21 
YGE N19 N20 SING Y N 22 
YGE N20 N21 DOUB Y N 23 
YGE C22 O23 DOUB N N 24 
YGE C22 O24 SING N N 25 
YGE O24 C25 SING N N 26 
YGE C25 C26 SING N N 27 
YGE C26 C27 DOUB Y N 28 
YGE C26 C31 SING Y N 29 
YGE C27 C28 SING Y N 30 
YGE C27 O32 SING N N 31 
YGE C28 C29 DOUB Y N 32 
YGE C29 C30 SING Y N 33 
YGE C29 C35 SING N N 34 
YGE C30 C31 DOUB Y N 35 
YGE O32 C33 SING N N 36 
YGE C33 C34 SING N N 37 
YGE C35 N36 TRIP N N 38 
YGE C15 H46 SING N N 39 
YGE C16 H47 SING N N 40 
YGE C25 H49 SING N N 41 
YGE C25 H50 SING N N 42 
YGE C28 H51 SING N N 43 
YGE C2  H38 SING N N 44 
YGE C2  H37 SING N N 45 
YGE C3  H39 SING N N 46 
YGE C3  H40 SING N N 47 
YGE C4  H10 SING N N 48 
YGE C5  H9  SING N N 49 
YGE C6  H42 SING N N 50 
YGE C6  H41 SING N N 51 
YGE C8  H43 SING N N 52 
YGE C8  H44 SING N N 53 
YGE C14 H45 SING N N 54 
YGE N19 H48 SING N N 55 
YGE C30 H52 SING N N 56 
YGE C31 H53 SING N N 57 
YGE C33 H54 SING N N 58 
YGE C33 H55 SING N N 59 
YGE C34 H57 SING N N 60 
YGE C34 H56 SING N N 61 
YGE C34 H58 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YGE SMILES           ACDLabs              12.01 "N#Cc1ccc(COC(=O)N2CC3CN(CC3C2)C(=O)c2cc3nn[NH]c3cc2)c(OCC)c1"                                                                                                            
YGE InChI            InChI                1.06  "InChI=1S/C24H24N6O4/c1-2-33-22-7-15(9-25)3-4-17(22)14-34-24(32)30-12-18-10-29(11-19(18)13-30)23(31)16-5-6-20-21(8-16)27-28-26-20/h3-8,18-19H,2,10-14H2,1H3,(H,26,27,28)" 
YGE InChIKey         InChI                1.06  SXYSIHXUTNMGIJ-UHFFFAOYSA-N                                                                                                                                               
YGE SMILES_CANONICAL CACTVS               3.385 "CCOc1cc(ccc1COC(=O)N2C[C@@H]3CN(C[C@H]3C2)C(=O)c4ccc5[nH]nnc5c4)C#N"                                                                                                     
YGE SMILES           CACTVS               3.385 "CCOc1cc(ccc1COC(=O)N2C[CH]3CN(C[CH]3C2)C(=O)c4ccc5[nH]nnc5c4)C#N"                                                                                                        
YGE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOc1cc(ccc1COC(=O)N2C[C@@H]3CN(C[C@H]3C2)C(=O)c4ccc5c(c4)nn[nH]5)C#N"                                                                                                   
YGE SMILES           "OpenEye OEToolkits" 2.0.7 "CCOc1cc(ccc1COC(=O)N2CC3CN(CC3C2)C(=O)c4ccc5c(c4)nn[nH]5)C#N"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YGE "SYSTEMATIC NAME" ACDLabs              12.01 "(4-cyano-2-ethoxyphenyl)methyl (3aR,6aS)-5-(1H-benzotriazole-5-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate"                                   
YGE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(4-cyano-2-ethoxy-phenyl)methyl (3~{a}~{S},6~{a}~{S})-2-(1~{H}-benzotriazol-5-ylcarbonyl)-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-5-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YGE "Create component" 2023-06-13 RCSB 
YGE "Initial release"  2024-12-18 RCSB 
# 
