data_VTE
# 
_chem_comp.id                                    VTE 
_chem_comp.name                                  "~{N}-(2-pyrrolidin-1-ylethyl)-2-[3,4,5-tris(oxidanyl)phenyl]carbonyl-1-benzofuran-5-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H22 N2 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-31 
_chem_comp.pdbx_modified_date                    2024-06-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        410.420 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VTE 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OLZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VTE C10 C1  C 0 1 N N N N N N 27.742 24.448 39.849 -8.797  1.722  -0.626 C10 VTE 1  
VTE C13 C2  C 0 1 Y N N N N N 27.814 27.850 37.328 -0.205  0.916  -0.228 C13 VTE 2  
VTE C17 C3  C 0 1 N N N N N N 25.670 24.244 34.300 4.044   -1.637 -0.045 C17 VTE 3  
VTE C20 C4  C 0 1 Y N N N N N 25.676 21.822 33.713 6.403   -0.874 0.190  C20 VTE 4  
VTE C21 C5  C 0 1 Y N N N N N 25.808 20.513 34.132 7.343   0.136  0.257  C21 VTE 5  
VTE C28 C6  C 0 1 Y N N N N N 27.854 24.742 35.499 1.600   -2.210 -0.046 C28 VTE 6  
VTE O01 O1  O 0 1 N N N N N N 32.067 27.892 38.301 -3.735  -2.240 -0.097 O01 VTE 7  
VTE C02 C7  C 0 1 N N N N N N 31.425 26.970 38.393 -3.380  -1.079 -0.158 C02 VTE 8  
VTE N03 N1  N 0 1 N N N N N N 31.955 25.786 39.203 -4.299  -0.095 -0.225 N03 VTE 9  
VTE C04 C8  C 0 1 N N N N N N 31.262 24.525 39.411 -5.726  -0.425 -0.225 C04 VTE 10 
VTE C05 C9  C 0 1 N N N N N N 29.859 24.652 40.067 -6.547  0.863  -0.308 C05 VTE 11 
VTE N06 N2  N 0 1 N N N N N N 29.156 24.063 39.516 -7.978  0.533  -0.308 N06 VTE 12 
VTE C07 C10 C 0 1 N N N N N N 29.277 22.599 39.907 -8.421  0.084  1.036  C07 VTE 13 
VTE C08 C11 C 0 1 N N N N N N 28.092 22.215 40.336 -9.955  0.294  0.993  C08 VTE 14 
VTE C09 C12 C 0 1 N N N N N N 27.076 23.305 39.869 -10.103 1.601  0.182  C09 VTE 15 
VTE C11 C13 C 0 1 Y N N N N N 30.022 26.911 37.729 -1.941  -0.747 -0.158 C11 VTE 16 
VTE C12 C14 C 0 1 Y N N N N N 29.045 27.943 37.918 -1.530  0.592  -0.228 C12 VTE 17 
VTE C14 C15 C 0 1 Y N N N N N 27.474 26.673 36.486 0.763   -0.082 -0.165 C14 VTE 18 
VTE O15 O2  O 0 1 Y N N N N N 26.344 26.310 35.781 2.109   -0.056 -0.150 O15 VTE 19 
VTE C16 C16 C 0 1 Y N N N N N 26.573 25.152 35.171 2.615   -1.305 -0.080 C16 VTE 20 
VTE O18 O3  O 0 1 N N N N N N 24.955 24.486 33.363 4.400   -2.801 -0.076 O18 VTE 21 
VTE C19 C17 C 0 1 Y N N N N N 25.777 22.819 34.704 5.051   -0.560 0.028  C19 VTE 22 
VTE O22 O4  O 0 1 N N N N N N 25.719 19.443 33.227 8.659   -0.169 0.414  O22 VTE 23 
VTE C23 C18 C 0 1 Y N N N N N 25.998 20.269 35.500 6.944   1.467  0.164  C23 VTE 24 
VTE O24 O5  O 0 1 N N N N N N 26.194 18.907 35.881 7.870   2.459  0.231  O24 VTE 25 
VTE C25 C19 C 0 1 Y N N N N N 26.142 21.225 36.442 5.597   1.784  0.004  C25 VTE 26 
VTE O26 O6  O 0 1 N N N N N N 26.387 20.908 37.836 5.211   3.085  -0.088 O26 VTE 27 
VTE C27 C20 C 0 1 Y N N N N N 25.996 22.585 36.017 4.653   0.777  -0.065 C27 VTE 28 
VTE C29 C21 C 0 1 Y N N N N N 28.407 25.706 36.323 0.363   -1.432 -0.101 C29 VTE 29 
VTE C30 C22 C 0 1 Y N N N N N 29.703 25.800 36.930 -0.992  -1.762 -0.100 C30 VTE 30 
VTE H1  H1  H 0 1 N N N N N N 27.696 24.941 40.831 -8.264  2.628  -0.337 H1  VTE 31 
VTE H2  H2  H 0 1 N N N N N N 27.333 25.121 39.081 -9.021  1.748  -1.693 H2  VTE 32 
VTE H3  H3  H 0 1 N N N N N N 27.087 28.635 37.475 0.094   1.952  -0.282 H3  VTE 33 
VTE H4  H4  H 0 1 N N N N N N 25.504 22.070 32.676 6.713   -1.907 0.257  H4  VTE 34 
VTE H5  H5  H 0 1 N N N N N N 28.335 23.833 35.171 1.690   -3.285 0.010  H5  VTE 35 
VTE H6  H6  H 0 1 N N N N N N 32.855 25.888 39.626 -4.015  0.831  -0.274 H6  VTE 36 
VTE H7  H7  H 0 1 N N N N N N 31.139 24.037 38.433 -5.953  -1.057 -1.084 H7  VTE 37 
VTE H8  H8  H 0 1 N N N N N N 31.887 23.894 40.060 -5.976  -0.957 0.693  H8  VTE 38 
VTE H9  H9  H 0 1 N N N N N N 29.905 24.293 41.106 -6.320  1.495  0.550  H9  VTE 39 
VTE H10 H10 H 0 1 N N N N N N 29.543 25.706 40.057 -6.297  1.395  -1.227 H10 VTE 40 
VTE H12 H12 H 0 1 N N N N N N 29.576 21.999 39.035 -8.181  -0.969 1.189  H12 VTE 41 
VTE H13 H13 H 0 1 N N N N N N 30.024 22.482 40.706 -7.970  0.699  1.815  H13 VTE 42 
VTE H14 H14 H 0 1 N N N N N N 28.091 22.140 41.433 -10.444 -0.535 0.481  H14 VTE 43 
VTE H15 H15 H 0 1 N N N N N N 27.829 21.239 39.902 -10.357 0.413  1.999  H15 VTE 44 
VTE H16 H16 H 0 1 N N N N N N 26.233 23.367 40.573 -10.213 2.453  0.853  H16 VTE 45 
VTE H17 H17 H 0 1 N N N N N N 26.697 23.067 38.864 -10.959 1.535  -0.490 H17 VTE 46 
VTE H18 H18 H 0 1 N N N N N N 29.282 28.800 38.531 -2.272  1.376  -0.282 H18 VTE 47 
VTE H19 H19 H 0 1 N N N N N N 25.834 18.623 33.693 9.137   -0.289 -0.417 H19 VTE 48 
VTE H20 H20 H 0 1 N N N N N N 26.312 18.855 36.822 8.236   2.714  -0.627 H20 VTE 49 
VTE H21 H21 H 0 1 N N N N N N 26.458 21.712 38.336 5.196   3.428  -0.992 H21 VTE 50 
VTE H22 H22 H 0 1 N N N N N N 26.059 23.399 36.724 3.609   1.023  -0.189 H22 VTE 51 
VTE H23 H23 H 0 1 N N N N N N 30.432 25.019 36.773 -1.301  -2.796 -0.050 H23 VTE 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VTE O22 C21 SING N N 1  
VTE O18 C17 DOUB N N 2  
VTE C20 C21 DOUB Y N 3  
VTE C20 C19 SING Y N 4  
VTE C21 C23 SING Y N 5  
VTE C17 C19 SING N N 6  
VTE C17 C16 SING N N 7  
VTE C19 C27 DOUB Y N 8  
VTE C16 C28 DOUB Y N 9  
VTE C16 O15 SING Y N 10 
VTE C28 C29 SING Y N 11 
VTE C23 O24 SING N N 12 
VTE C23 C25 DOUB Y N 13 
VTE O15 C14 SING Y N 14 
VTE C27 C25 SING Y N 15 
VTE C29 C14 DOUB Y N 16 
VTE C29 C30 SING Y N 17 
VTE C25 O26 SING N N 18 
VTE C14 C13 SING Y N 19 
VTE C30 C11 DOUB Y N 20 
VTE C13 C12 DOUB Y N 21 
VTE C11 C12 SING Y N 22 
VTE C11 C02 SING N N 23 
VTE O01 C02 DOUB N N 24 
VTE C02 N03 SING N N 25 
VTE N03 C04 SING N N 26 
VTE C04 C05 SING N N 27 
VTE N06 C10 SING N N 28 
VTE N06 C07 SING N N 29 
VTE N06 C05 SING N N 30 
VTE C10 C09 SING N N 31 
VTE C09 C08 SING N N 32 
VTE C07 C08 SING N N 33 
VTE C10 H1  SING N N 34 
VTE C10 H2  SING N N 35 
VTE C13 H3  SING N N 36 
VTE C20 H4  SING N N 37 
VTE C28 H5  SING N N 38 
VTE N03 H6  SING N N 39 
VTE C04 H7  SING N N 40 
VTE C04 H8  SING N N 41 
VTE C05 H9  SING N N 42 
VTE C05 H10 SING N N 43 
VTE C07 H12 SING N N 44 
VTE C07 H13 SING N N 45 
VTE C08 H14 SING N N 46 
VTE C08 H15 SING N N 47 
VTE C09 H16 SING N N 48 
VTE C09 H17 SING N N 49 
VTE C12 H18 SING N N 50 
VTE O22 H19 SING N N 51 
VTE O24 H20 SING N N 52 
VTE O26 H21 SING N N 53 
VTE C27 H22 SING N N 54 
VTE C30 H23 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VTE InChI            InChI                1.06  "InChI=1S/C22H22N2O6/c25-16-10-15(11-17(26)21(16)28)20(27)19-12-14-9-13(3-4-18(14)30-19)22(29)23-5-8-24-6-1-2-7-24/h3-4,9-12,25-26,28H,1-2,5-8H2,(H,23,29)" 
VTE InChIKey         InChI                1.06  FQUBMOYVKLVEKR-UHFFFAOYSA-N                                                                                                                                 
VTE SMILES_CANONICAL CACTVS               3.385 "Oc1cc(cc(O)c1O)C(=O)c2oc3ccc(cc3c2)C(=O)NCCN4CCCC4"                                                                                                        
VTE SMILES           CACTVS               3.385 "Oc1cc(cc(O)c1O)C(=O)c2oc3ccc(cc3c2)C(=O)NCCN4CCCC4"                                                                                                        
VTE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C(=O)NCCN3CCCC3)cc(o2)C(=O)c4cc(c(c(c4)O)O)O"                                                                                                    
VTE SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C(=O)NCCN3CCCC3)cc(o2)C(=O)c4cc(c(c(c4)O)O)O"                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           VTE 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-(2-pyrrolidin-1-ylethyl)-2-[3,4,5-tris(oxidanyl)phenyl]carbonyl-1-benzofuran-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VTE "Create component" 2023-03-31 PDBE 
VTE "Initial release"  2024-06-19 RCSB 
# 
