data_HNE
# 
_chem_comp.id                                    HNE 
_chem_comp.name                                  "(2E,4R)-4-HYDROXYNON-2-ENAL" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H16 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2006-08-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        156.222 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HNE 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2J3K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HNE C1   C1   C 0 1 N N N N N N 34.322 4.418  79.122 1.586 2.364  -0.270 C1   HNE 1  
HNE C2   C2   C 0 1 N N N N N N 35.519 4.751  80.036 2.099 0.988  -0.128 C2   HNE 2  
HNE C3   C3   C 0 1 N N N N N N 36.748 4.468  79.647 1.238 -0.006 0.122  C3   HNE 3  
HNE C4   C4   C 0 1 N N R N N N 37.917 4.407  80.651 1.661 -1.439 0.283  C4   HNE 4  
HNE C5   C5   C 0 1 N N N N N N 39.104 3.655  80.016 1.225 -2.038 1.627  C5   HNE 5  
HNE C6   C6   C 0 1 N N N N N N 39.898 2.914  81.107 1.768 -1.267 2.834  C6   HNE 6  
HNE C7   C7   C 0 1 N N N N N N 39.596 1.404  81.065 1.308 -1.843 4.177  C7   HNE 7  
HNE C8   C8   C 0 1 N N N N N N 40.383 0.696  82.183 1.834 -1.063 5.383  C8   HNE 8  
HNE C9   C9   C 0 1 N N N N N N 41.403 -0.277 81.565 1.412 -1.714 6.691  C9   HNE 9  
HNE O10  O10  O 0 1 N N N N N N 38.315 5.715  80.995 1.047 -2.210 -0.751 O10  HNE 10 
HNE O11  O11  O 0 1 N N N N N N 33.189 4.451  79.547 2.328 3.312  -0.498 O11  HNE 11 
HNE H2   H2   H 0 1 N N N N N N 35.348 5.227  81.016 3.166 0.826  -0.229 H2   HNE 12 
HNE H3   H3   H 0 1 N N N N N N 36.944 4.271  78.580 0.175 0.203  0.216  H3   HNE 13 
HNE H4   H4   H 0 1 N N N N N N 37.587 3.868  81.570 2.746 -1.552 0.171  H4   HNE 14 
HNE H5C1 1H5C H 0 0 N N N N N N 39.753 4.331  79.412 1.566 -3.080 1.674  H5C1 HNE 15 
HNE H5C2 2H5C H 0 0 N N N N N N 38.777 2.971  79.198 0.129 -2.086 1.665  H5C2 HNE 16 
HNE H10  H10  H 0 1 N N N N N N 39.035 5.677  81.614 1.769 -2.616 -1.254 H10  HNE 17 
HNE H6C1 1H6C H 0 0 N N N N N N 39.713 3.345  82.118 2.865 -1.294 2.809  H6C1 HNE 18 
HNE H6C2 2H6C H 0 0 N N N N N N 40.992 3.120  81.035 1.475 -0.212 2.775  H6C2 HNE 19 
HNE H7C1 1H7C H 0 0 N N N N N N 39.796 0.961  80.062 0.213 -1.879 4.207  H7C1 HNE 20 
HNE H7C2 2H7C H 0 0 N N N N N N 38.503 1.190  81.117 1.660 -2.880 4.242  H7C2 HNE 21 
HNE H8C1 1H8C H 0 0 N N N N N N 39.710 0.190  82.914 1.457 -0.035 5.366  H8C1 HNE 22 
HNE H8C2 2H8C H 0 0 N N N N N N 40.864 1.420  82.881 2.928 -1.010 5.344  H8C2 HNE 23 
HNE H9C1 1H9C H 0 0 N N N N N N 41.973 -0.790 82.375 0.322 -1.756 6.774  H9C1 HNE 24 
HNE H9C2 2H9C H 0 0 N N N N N N 42.076 0.229  80.834 1.803 -2.734 6.766  H9C2 HNE 25 
HNE H9C3 3H9C H 0 0 N N N N N N 40.922 -1.001 80.867 1.796 -1.140 7.540  H9C3 HNE 26 
HNE H1   H1   H 0 1 N N N N N N 34.497 4.152  78.090 0.497 2.494  -0.160 H1   HNE 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HNE C1  C2   SING N N 1  
HNE C1  O11  DOUB N N 2  
HNE C1  H1   SING N N 3  
HNE C2  C3   DOUB N N 4  
HNE C2  H2   SING N N 5  
HNE C3  C4   SING N N 6  
HNE C3  H3   SING N N 7  
HNE C4  C5   SING N N 8  
HNE C4  O10  SING N N 9  
HNE C4  H4   SING N N 10 
HNE C5  C6   SING N N 11 
HNE C5  H5C1 SING N N 12 
HNE C5  H5C2 SING N N 13 
HNE C6  C7   SING N N 14 
HNE C6  H6C1 SING N N 15 
HNE C6  H6C2 SING N N 16 
HNE C7  C8   SING N N 17 
HNE C7  H7C1 SING N N 18 
HNE C7  H7C2 SING N N 19 
HNE C8  C9   SING N N 20 
HNE C8  H8C1 SING N N 21 
HNE C8  H8C2 SING N N 22 
HNE C9  H9C1 SING N N 23 
HNE C9  H9C2 SING N N 24 
HNE C9  H9C3 SING N N 25 
HNE O10 H10  SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HNE SMILES           ACDLabs              10.04 "O=C/C=C/C(O)CCCCC"                                                                
HNE SMILES_CANONICAL CACTVS               3.341 "CCCCC[C@@H](O)/C=C/C=O"                                                           
HNE SMILES           CACTVS               3.341 "CCCCC[CH](O)C=CC=O"                                                               
HNE SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCC[C@H](C=CC=O)O"                                                              
HNE SMILES           "OpenEye OEToolkits" 1.5.0 "CCCCCC(C=CC=O)O"                                                                  
HNE InChI            InChI                1.03  "InChI=1S/C9H16O2/c1-2-3-4-6-9(11)7-5-8-10/h5,7-9,11H,2-4,6H2,1H3/b7-5+/t9-/m1/s1" 
HNE InChIKey         InChI                1.03  JVJFIQYAHPMBBX-VPIOIWJLSA-N                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
HNE "SYSTEMATIC NAME" ACDLabs              10.04 "(2E,4R)-4-hydroxynon-2-enal" 
HNE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(4R)-4-hydroxynon-2-enal"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HNE "Create component"  2006-08-22 RCSB 
HNE "Modify descriptor" 2011-06-04 RCSB 
HNE "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            HNE 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C3 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
