data_H8E
#

_chem_comp.id                                   H8E
_chem_comp.name                                 "benzyl-N-[(2S)-1-[[(3S)-7-amino-1-(benzylamino)-1,2-dioxoheptan-3-yl]amino]-5-(2-methyl-2-phenylhydrazinyl)-1,5-dioxopentan-2-yl]carbamate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C34 H42 N6 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-11-23
_chem_comp.pdbx_modified_date                   2019-03-08
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       630.734
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    H8E
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6I9A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H8E  CAQ  C1   C  0  1  Y  N  N   8.153   -7.362   9.183   -8.277  -2.529   1.860  CAQ  H8E   1  
H8E  CAK  C2   C  0  1  Y  N  N   9.499   -6.965   9.326   -9.198  -3.535   1.635  CAK  H8E   2  
H8E  CAH  C3   C  0  1  Y  N  N  10.311   -7.585  10.277  -10.198  -3.359   0.697  CAH  H8E   3  
H8E  CAL  C4   C  0  1  Y  N  N   9.814   -8.583  11.110  -10.278  -2.177  -0.015  CAL  H8E   4  
H8E  CAR  C5   C  0  1  Y  N  N   8.482   -8.938  10.958   -9.357  -1.170   0.211  CAR  H8E   5  
H8E  CBO  C6   C  0  1  Y  N  N   7.648   -8.388   9.995   -8.356  -1.347   1.148  CBO  H8E   6  
H8E  CBA  C7   C  0  1  N  N  N   6.297   -8.792   9.959   -7.352  -0.250   1.394  CBA  H8E   7  
H8E  NBE  N1   N  0  1  N  N  N   6.073   -9.985   9.125   -6.207  -0.427   0.498  NBE  H8E   8  
H8E  CBL  C8   C  0  1  N  N  N   5.110  -10.908   9.400   -5.177   0.442   0.540  CBL  H8E   9  
H8E  OAE  O1   O  0  1  N  N  N   4.440  -10.854  10.439   -5.200   1.372   1.320  OAE  H8E  10  
H8E  CBN  C9   C  0  1  N  N  N   4.921  -12.009   8.361   -4.012   0.262  -0.371  CBN  H8E  11  
H8E  OAG  O2   O  0  1  N  N  N   5.918  -12.154   7.588   -3.990  -0.664  -1.148  OAG  H8E  12  
H8E  CBS  C10  C  0  1  N  N  S   4.361  -13.318   9.001   -2.861   1.234  -0.324  CBS  H8E  13  
H8E  CBB  C11  C  0  1  N  N  N   4.611  -14.564   8.143   -3.272   2.544  -0.998  CBB  H8E  14  
H8E  CAY  C12  C  0  1  N  N  N   4.168  -15.859   8.829   -2.151   3.572  -0.841  CAY  H8E  15  
H8E  CAX  C13  C  0  1  N  N  N   4.157  -17.094   7.922   -2.562   4.883  -1.515  CAX  H8E  16  
H8E  CAW  C14  C  0  1  N  N  N   5.562  -17.577   7.587   -1.440   5.911  -1.358  CAW  H8E  17  
H8E  NAB  N2   N  0  1  N  N  N   5.468  -18.799   6.733   -1.835   7.170  -2.005  NAB  H8E  18  
H8E  NBG  N3   N  0  1  N  N  N   2.937  -13.229   9.348   -1.710   0.662  -1.029  NBG  H8E  19  
H8E  C    C15  C  0  1  N  N  N   2.412  -13.369  10.565   -0.462   1.064  -0.717  C    H8E  20  
H8E  O    O3   O  0  1  N  N  N   3.042  -13.544  11.600   -0.292   1.899   0.146  O    H8E  21  
H8E  CA   C16  C  0  1  N  N  S   0.914  -13.096  10.596    0.721   0.477  -1.442  CA   H8E  22  
H8E  N    N4   N  0  1  N  N  N   0.254  -13.729  11.734    1.875   1.367  -1.295  N    H8E  23  
H8E  CBK  C17  C  0  1  N  N  N   0.125  -15.075  11.845    2.354   1.653  -0.068  CBK  H8E  24  
H8E  OAD  O4   O  0  1  N  N  N   0.689  -15.814  11.025    1.828   1.172   0.917  OAD  H8E  25  
H8E  OBI  O5   O  0  1  N  N  N  -0.585  -15.480  12.829    3.414   2.471   0.068  OBI  H8E  26  
H8E  CBD  C18  C  0  1  N  N  N  -0.703  -16.928  13.081    3.875   2.735   1.419  CBD  H8E  27  
H8E  CBP  C19  C  0  1  Y  N  N  -1.337  -17.188  14.373    5.061   3.664   1.373  CBP  H8E  28  
H8E  CAS  C20  C  0  1  Y  N  N  -2.693  -17.500  14.482    4.869   5.032   1.420  CAS  H8E  29  
H8E  CAM  C21  C  0  1  Y  N  N  -3.329  -17.778  15.730    5.957   5.884   1.378  CAM  H8E  30  
H8E  CAI  C22  C  0  1  Y  N  N  -2.519  -17.645  16.871    7.236   5.368   1.289  CAI  H8E  31  
H8E  CAN  C23  C  0  1  Y  N  N  -1.189  -17.268  16.763    7.428   4.000   1.243  CAN  H8E  32  
H8E  CAT  C24  C  0  1  Y  N  N  -0.584  -17.041  15.539    6.341   3.148   1.290  CAT  H8E  33  
H8E  CB   C25  C  0  1  N  N  N   0.673  -11.579  10.662    1.055  -0.893  -0.847  CB   H8E  34  
H8E  CG   C26  C  0  1  N  N  N   1.304  -10.912  11.913    2.175  -1.543  -1.662  CG   H8E  35  
H8E  CD   C27  C  0  1  N  N  N   1.373   -9.422  11.755    2.504  -2.892  -1.076  CD   H8E  36  
H8E  OE1  O6   O  0  1  N  N  N   0.393   -8.719  12.006    1.901  -3.294  -0.103  OE1  H8E  37  
H8E  NE2  N5   N  0  1  N  N  N   2.575   -8.928  11.443    3.467  -3.653  -1.634  NE2  H8E  38  
H8E  NBT  N6   N  0  1  N  N  N   2.856   -7.550  11.634    3.772  -4.907  -1.089  NBT  H8E  39  
H8E  CAA  C28  C  0  1  N  N  N   3.306   -7.231  13.016    2.868  -6.039  -1.305  CAA  H8E  40  
H8E  CBQ  C29  C  0  1  Y  N  N   3.412   -6.879  10.513    4.939  -5.078  -0.340  CBQ  H8E  41  
H8E  CAU  C30  C  0  1  Y  N  N   4.223   -5.736  10.682    5.243  -6.321   0.200  CAU  H8E  42  
H8E  CAO  C31  C  0  1  Y  N  N   4.734   -5.075   9.564    6.398  -6.486   0.939  CAO  H8E  43  
H8E  CAJ  C32  C  0  1  Y  N  N   4.506   -5.604   8.292    7.251  -5.416   1.142  CAJ  H8E  44  
H8E  CAP  C33  C  0  1  Y  N  N   3.738   -6.765   8.127    6.950  -4.178   0.606  CAP  H8E  45  
H8E  CAV  C34  C  0  1  Y  N  N   3.176   -7.406   9.231    5.800  -4.006  -0.140  CAV  H8E  46  
H8E  H1   H1   H  0  1  N  N  N   7.517   -6.880   8.455   -7.498  -2.664   2.596  H1   H8E  47  
H8E  H2   H2   H  0  1  N  N  N   9.901   -6.182   8.700   -9.135  -4.458   2.191  H2   H8E  48  
H8E  H3   H3   H  0  1  N  N  N  11.344   -7.285  10.368  -10.917  -4.145   0.520  H3   H8E  49  
H8E  H4   H4   H  0  1  N  N  N  10.442   -9.063  11.847  -11.059  -2.039  -0.748  H4   H8E  50  
H8E  H5   H5   H  0  1  N  N  N   8.072   -9.682  11.625   -9.419  -0.247  -0.345  H5   H8E  51  
H8E  H6   H6   H  0  1  N  N  N   5.695   -7.965   9.556   -7.817   0.717   1.203  H6   H8E  52  
H8E  H7   H7   H  0  1  N  N  N   5.971   -9.016  10.985   -7.014  -0.292   2.429  H7   H8E  53  
H8E  H8   H8   H  0  1  N  N  N   6.653  -10.123   8.322   -6.189  -1.170  -0.125  H8   H8E  54  
H8E  H11  H11  H  0  1  N  N  N   4.918  -13.466   9.938   -2.592   1.428   0.714  H11  H8E  55  
H8E  H12  H12  H  0  1  N  N  N   5.688  -14.632   7.928   -3.456   2.366  -2.058  H12  H8E  56  
H8E  H13  H13  H  0  1  N  N  N   4.054  -14.458   7.200   -4.181   2.923  -0.531  H13  H8E  57  
H8E  H14  H14  H  0  1  N  N  N   3.150  -15.710   9.217   -1.967   3.751   0.218  H14  H8E  58  
H8E  H15  H15  H  0  1  N  N  N   4.854  -16.055   9.666   -1.242   3.193  -1.309  H15  H8E  59  
H8E  H16  H16  H  0  1  N  N  N   3.637  -16.841   6.986   -2.746   4.705  -2.575  H16  H8E  60  
H8E  H17  H17  H  0  1  N  N  N   3.617  -17.904   8.434   -3.471   5.262  -1.048  H17  H8E  61  
H8E  H18  H18  H  0  1  N  N  N   6.100  -17.817   8.516   -1.256   6.090  -0.299  H18  H8E  62  
H8E  H19  H19  H  0  1  N  N  N   6.103  -16.788   7.043   -0.531   5.532  -1.826  H19  H8E  63  
H8E  H20  H20  H  0  1  N  N  N   6.388  -19.121   6.509   -2.710   7.508  -1.633  H20  H8E  64  
H8E  H21  H21  H  0  1  N  N  N   4.975  -19.515   7.228   -1.110   7.866  -1.915  H21  H8E  65  
H8E  H23  H23  H  0  1  N  N  N   2.300  -13.046   8.599   -1.847  -0.005  -1.720  H23  H8E  66  
H8E  H24  H24  H  0  1  N  N  N   0.472  -13.475   9.663    0.481   0.365  -2.499  H24  H8E  67  
H8E  H25  H25  H  0  1  N  N  N  -0.117  -13.149  12.459    2.295   1.751  -2.080  H25  H8E  68  
H8E  H26  H26  H  0  1  N  N  N  -1.311  -17.383  12.285    3.073   3.198   1.993  H26  H8E  69  
H8E  H27  H27  H  0  1  N  N  N   0.302  -17.376  13.077    4.167   1.797   1.893  H27  H8E  70  
H8E  H28  H28  H  0  1  N  N  N  -3.288  -17.533  13.582    3.870   5.435   1.489  H28  H8E  71  
H8E  H29  H29  H  0  1  N  N  N  -4.366  -18.072  15.793    5.807   6.953   1.413  H29  H8E  72  
H8E  H30  H30  H  0  1  N  N  N  -2.939  -17.839  17.847    8.086   6.034   1.256  H30  H8E  73  
H8E  H31  H31  H  0  1  N  N  N  -0.606  -17.147  17.664    8.428   3.597   1.174  H31  H8E  74  
H8E  H32  H32  H  0  1  N  N  N   0.456  -16.754  15.487    6.491   2.079   1.258  H32  H8E  75  
H8E  H33  H33  H  0  1  N  N  N   1.107  -11.117   9.763    1.381  -0.771   0.186  H33  H8E  76  
H8E  H34  H34  H  0  1  N  N  N  -0.412  -11.398  10.679    0.169  -1.527  -0.876  H34  H8E  77  
H8E  H35  H35  H  0  1  N  N  N   0.692  -11.152  12.795    1.849  -1.665  -2.695  H35  H8E  78  
H8E  H36  H36  H  0  1  N  N  N   2.321  -11.305  12.055    3.061  -0.909  -1.633  H36  H8E  79  
H8E  H37  H37  H  0  1  N  N  N   3.280   -9.533  11.073    3.948  -3.331  -2.412  H37  H8E  80  
H8E  H38  H38  H  0  1  N  N  N   2.756   -7.856  13.735    3.157  -6.566  -2.214  H38  H8E  81  
H8E  H39  H39  H  0  1  N  N  N   4.384   -7.431  13.106    2.929  -6.720  -0.456  H39  H8E  82  
H8E  H40  H40  H  0  1  N  N  N   3.111   -6.170  13.229    1.846  -5.674  -1.406  H40  H8E  83  
H8E  H41  H41  H  0  1  N  N  N   4.448   -5.374  11.674    4.578  -7.156   0.043  H41  H8E  84  
H8E  H42  H42  H  0  1  N  N  N   5.300   -4.163   9.682    6.635  -7.452   1.360  H42  H8E  85  
H8E  H43  H43  H  0  1  N  N  N   4.926   -5.114   7.426    8.153  -5.549   1.721  H43  H8E  86  
H8E  H44  H44  H  0  1  N  N  N   3.580   -7.166   7.137    7.618  -3.344   0.766  H44  H8E  87  
H8E  H45  H45  H  0  1  N  N  N   2.570   -8.291   9.103    5.566  -3.039  -0.558  H45  H8E  88  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H8E  NAB  CAW  SING  N  N   1  
H8E  CAW  CAX  SING  N  N   2  
H8E  OAG  CBN  DOUB  N  N   3  
H8E  CAX  CAY  SING  N  N   4  
H8E  CAP  CAJ  DOUB  Y  N   5  
H8E  CAP  CAV  SING  Y  N   6  
H8E  CBB  CAY  SING  N  N   7  
H8E  CBB  CBS  SING  N  N   8  
H8E  CAJ  CAO  SING  Y  N   9  
H8E  CBN  CBS  SING  N  N  10  
H8E  CBN  CBL  SING  N  N  11  
H8E  CBS  NBG  SING  N  N  12  
H8E  NBE  CBL  SING  N  N  13  
H8E  NBE  CBA  SING  N  N  14  
H8E  CAQ  CAK  DOUB  Y  N  15  
H8E  CAQ  CBO  SING  Y  N  16  
H8E  CAV  CBQ  DOUB  Y  N  17  
H8E  CAK  CAH  SING  Y  N  18  
H8E  NBG  C    SING  N  N  19  
H8E  CBL  OAE  DOUB  N  N  20  
H8E  CAO  CAU  DOUB  Y  N  21  
H8E  CBA  CBO  SING  N  N  22  
H8E  CBO  CAR  DOUB  Y  N  23  
H8E  CAH  CAL  DOUB  Y  N  24  
H8E  CBQ  CAU  SING  Y  N  25  
H8E  CBQ  NBT  SING  N  N  26  
H8E  C    CA   SING  N  N  27  
H8E  C    O    DOUB  N  N  28  
H8E  CA   CB   SING  N  N  29  
H8E  CA   N    SING  N  N  30  
H8E  CB   CG   SING  N  N  31  
H8E  CAR  CAL  SING  Y  N  32  
H8E  OAD  CBK  DOUB  N  N  33  
H8E  NE2  NBT  SING  N  N  34  
H8E  NE2  CD   SING  N  N  35  
H8E  NBT  CAA  SING  N  N  36  
H8E  N    CBK  SING  N  N  37  
H8E  CD   CG   SING  N  N  38  
H8E  CD   OE1  DOUB  N  N  39  
H8E  CBK  OBI  SING  N  N  40  
H8E  OBI  CBD  SING  N  N  41  
H8E  CBD  CBP  SING  N  N  42  
H8E  CBP  CAS  DOUB  Y  N  43  
H8E  CBP  CAT  SING  Y  N  44  
H8E  CAS  CAM  SING  Y  N  45  
H8E  CAT  CAN  DOUB  Y  N  46  
H8E  CAM  CAI  DOUB  Y  N  47  
H8E  CAN  CAI  SING  Y  N  48  
H8E  CAQ  H1   SING  N  N  49  
H8E  CAK  H2   SING  N  N  50  
H8E  CAH  H3   SING  N  N  51  
H8E  CAL  H4   SING  N  N  52  
H8E  CAR  H5   SING  N  N  53  
H8E  CBA  H6   SING  N  N  54  
H8E  CBA  H7   SING  N  N  55  
H8E  NBE  H8   SING  N  N  56  
H8E  CBS  H11  SING  N  N  57  
H8E  CBB  H12  SING  N  N  58  
H8E  CBB  H13  SING  N  N  59  
H8E  CAY  H14  SING  N  N  60  
H8E  CAY  H15  SING  N  N  61  
H8E  CAX  H16  SING  N  N  62  
H8E  CAX  H17  SING  N  N  63  
H8E  CAW  H18  SING  N  N  64  
H8E  CAW  H19  SING  N  N  65  
H8E  NAB  H20  SING  N  N  66  
H8E  NAB  H21  SING  N  N  67  
H8E  NBG  H23  SING  N  N  68  
H8E  CA   H24  SING  N  N  69  
H8E  N    H25  SING  N  N  70  
H8E  CBD  H26  SING  N  N  71  
H8E  CBD  H27  SING  N  N  72  
H8E  CAS  H28  SING  N  N  73  
H8E  CAM  H29  SING  N  N  74  
H8E  CAI  H30  SING  N  N  75  
H8E  CAN  H31  SING  N  N  76  
H8E  CAT  H32  SING  N  N  77  
H8E  CB   H33  SING  N  N  78  
H8E  CB   H34  SING  N  N  79  
H8E  CG   H35  SING  N  N  80  
H8E  CG   H36  SING  N  N  81  
H8E  NE2  H37  SING  N  N  82  
H8E  CAA  H38  SING  N  N  83  
H8E  CAA  H39  SING  N  N  84  
H8E  CAA  H40  SING  N  N  85  
H8E  CAU  H41  SING  N  N  86  
H8E  CAO  H42  SING  N  N  87  
H8E  CAJ  H43  SING  N  N  88  
H8E  CAP  H44  SING  N  N  89  
H8E  CAV  H45  SING  N  N  90  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H8E  InChI             InChI                 1.03   "InChI=1S/C34H42N6O6/c1-40(27-17-9-4-10-18-27)39-30(41)21-20-29(38-34(45)46-24-26-15-7-3-8-16-26)32(43)37-28(19-11-12-22-35)31(42)33(44)36-23-25-13-5-2-6-14-25/h2-10,13-18,28-29H,11-12,19-24,35H2,1H3,(H,36,44)(H,37,43)(H,38,45)(H,39,41)/t28-,29-/m0/s1"  
H8E  InChIKey          InChI                 1.03   XDVSKHGOOXWVDB-VMPREFPWSA-N  
H8E  SMILES_CANONICAL  CACTVS                3.385  "CN(NC(=O)CC[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](CCCCN)C(=O)C(=O)NCc2ccccc2)c3ccccc3"  
H8E  SMILES            CACTVS                3.385  "CN(NC(=O)CC[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](CCCCN)C(=O)C(=O)NCc2ccccc2)c3ccccc3"  
H8E  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN(c1ccccc1)NC(=O)CC[C@@H](C(=O)N[C@@H](CCCCN)C(=O)C(=O)NCc2ccccc2)NC(=O)OCc3ccccc3"  
H8E  SMILES            "OpenEye OEToolkits"  2.0.7  "CN(c1ccccc1)NC(=O)CCC(C(=O)NC(CCCCN)C(=O)C(=O)NCc2ccccc2)NC(=O)OCc3ccccc3"  
#
_pdbx_chem_comp_identifier.comp_id          H8E
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(phenylmethyl) ~{N}-[(2~{S})-1-[[(3~{S})-7-azanyl-1,2-bis(oxidanylidene)-1-[(phenylmethyl)amino]heptan-3-yl]amino]-5-(2-methyl-2-phenyl-hydrazinyl)-1,5-bis(oxidanylidene)pentan-2-yl]carbamate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H8E  "Create component"  2018-11-23  EBI   
H8E  "Modify formula"    2019-02-26  RCSB  
H8E  "Initial release"   2019-03-13  RCSB  
##
