data_FDE
# 
_chem_comp.id                                    FDE 
_chem_comp.name                                  "FE(III) DEUTEROPORPHYRIN IX" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H28 Fe N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2005-09-13 
_chem_comp.pdbx_modified_date                    2023-09-23 
_chem_comp.pdbx_ambiguous_flag                   Y 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        564.413 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     FDE 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   Y 
_chem_comp.pdbx_model_coordinates_db_code        2AT4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
FDE CHA  CHA   C  0 1 N N N 11.568 22.937 34.958 ? ? ? CHA  FDE 1  
FDE C1A  C1A   C  0 1 N N N 10.255 22.605 35.117 ? ? ? C1A  FDE 2  
FDE C2A  C2A   C  0 1 N N N 9.161  23.460 34.777 ? ? ? C2A  FDE 3  
FDE CAA  CAA   C  0 1 N N N 9.244  24.876 34.214 ? ? ? CAA  FDE 4  
FDE CBA  CBA   C  0 1 N N N 8.791  25.896 35.255 ? ? ? CBA  FDE 5  
FDE CGA  CGA   C  0 1 N N N 8.894  27.327 34.808 ? ? ? CGA  FDE 6  
FDE O1A  O1A   O  0 1 N N N 9.643  27.676 33.870 ? ? ? O1A  FDE 7  
FDE O2A  O2A   O  0 1 N N N 8.156  28.137 35.368 ? ? ? O2A  FDE 8  
FDE C3A  C3A   C  0 1 N N N 8.072  22.773 35.034 ? ? ? C3A  FDE 9  
FDE CMA  CMA   C  0 1 N N N 6.656  23.245 34.819 ? ? ? CMA  FDE 10 
FDE C4A  C4A   C  0 1 N N N 8.456  21.489 35.560 ? ? ? C4A  FDE 11 
FDE NA   "N A" N  0 1 N N N 9.818  21.399 35.598 ? ? ? NA   FDE 12 
FDE CHB  CHB   C  0 1 N N N 7.607  20.486 35.949 ? ? ? CHB  FDE 13 
FDE C1B  C1B   C  0 1 Y N N 7.982  19.365 36.689 ? ? ? C1B  FDE 14 
FDE C2B  C2B   C  0 1 Y N N 7.076  18.390 37.265 ? ? ? C2B  FDE 15 
FDE C3B  C3B   C  0 1 Y N N 7.804  17.519 37.957 ? ? ? C3B  FDE 16 
FDE CME  CME   C  0 1 N N N 7.189  16.354 38.757 ? ? ? CME  FDE 17 
FDE C4B  C4B   C  0 1 Y N N 9.191  17.902 37.830 ? ? ? C4B  FDE 18 
FDE NB   "N B" N  0 1 Y N N 9.273  19.038 37.047 ? ? ? NB   FDE 19 
FDE CHC  CHC   C  0 1 N N N 10.288 17.278 38.390 ? ? ? CHC  FDE 20 
FDE C1C  C1C   C  0 1 N N N 11.619 17.563 38.124 ? ? ? C1C  FDE 21 
FDE C2C  C2C   C  0 1 N N N 12.806 16.843 38.559 ? ? ? C2C  FDE 22 
FDE C3C  C3C   C  0 1 N N N 13.860 17.410 38.074 ? ? ? C3C  FDE 23 
FDE CMF  CMF   C  0 1 N N N 15.257 16.888 38.327 ? ? ? CMF  FDE 24 
FDE C4C  C4C   C  0 1 N N N 13.436 18.509 37.284 ? ? ? C4C  FDE 25 
FDE NC   "N C" N  0 1 N N N 12.061 18.598 37.343 ? ? ? NC   FDE 26 
FDE CHD  CHD   C  0 1 N N N 14.250 19.350 36.646 ? ? ? CHD  FDE 27 
FDE C1D  C1D   C  0 1 N N N 13.881 20.480 36.027 ? ? ? C1D  FDE 28 
FDE C2D  C2D   C  0 1 N N N 14.818 21.398 35.461 ? ? ? C2D  FDE 29 
FDE CMD  CMD   C  0 1 N N N 16.340 21.279 35.419 ? ? ? CMD  FDE 30 
FDE C3D  C3D   C  0 1 N N N 14.003 22.502 34.941 ? ? ? C3D  FDE 31 
FDE CAD  CAD   C  0 1 N N N 14.516 23.740 34.248 ? ? ? CAD  FDE 32 
FDE CBD  CBD   C  0 1 N N N 14.122 23.678 32.776 ? ? ? CBD  FDE 33 
FDE CGD  CGD   C  0 1 N N N 14.610 24.836 31.937 ? ? ? CGD  FDE 34 
FDE O1D  O1D   O  0 1 N N N 15.629 24.672 31.193 ? ? ? O1D  FDE 35 
FDE O2D  O2D   O  0 1 N N N 13.974 25.924 31.958 ? ? ? O2D  FDE 36 
FDE C4D  C4D   C  0 1 N N N 12.638 22.139 35.231 ? ? ? C4D  FDE 37 
FDE ND   "N D" N  0 1 N N R 12.585 20.916 35.876 ? ? ? ND   FDE 38 
FDE FE   FE    FE 0 0 N N N 10.907 19.997 36.498 ? ? ? FE   FDE 39 
FDE HHA  HHA   H  0 1 N N N 11.780 23.926 34.580 ? ? ? HHA  FDE 40 
FDE HAA1 HAA1  H  0 0 N N N 10.284 25.090 33.927 ? ? ? HAA1 FDE 41 
FDE HAA2 HAA2  H  0 0 N N N 8.596  24.951 33.328 ? ? ? HAA2 FDE 42 
FDE HBA1 HBA1  H  0 0 N N N 7.740  25.689 35.505 ? ? ? HBA1 FDE 43 
FDE HBA2 HBA2  H  0 0 N N N 9.414  25.771 36.153 ? ? ? HBA2 FDE 44 
FDE H1A  H1A   H  0 1 N N N 9.530  28.604 33.702 ? ? ? H1A  FDE 45 
FDE HMA1 HMA1  H  0 0 N N N 5.955  22.454 35.125 ? ? ? HMA1 FDE 46 
FDE HMA2 HMA2  H  0 0 N N N 6.475  24.148 35.421 ? ? ? HMA2 FDE 47 
FDE HMA3 HMA3  H  0 0 N N N 6.505  23.478 33.755 ? ? ? HMA3 FDE 48 
FDE HHB  HHB   H  0 1 N N N 6.570  20.570 35.661 ? ? ? HHB  FDE 49 
FDE H2B  H2B   H  0 1 N N N 6.002  18.374 37.152 ? ? ? H2B  FDE 50 
FDE HME1 HME1  H  0 0 N N N 7.121  15.463 38.115 ? ? ? HME1 FDE 51 
FDE HME2 HME2  H  0 0 N N N 7.824  16.132 39.627 ? ? ? HME2 FDE 52 
FDE HME3 HME3  H  0 0 N N N 6.183  16.636 39.100 ? ? ? HME3 FDE 53 
FDE HHC  HHC   H  0 1 N N N 10.091 16.492 39.104 ? ? ? HHC  FDE 54 
FDE H2C  H2C   H  0 1 N N N 12.806 15.967 39.191 ? ? ? H2C  FDE 55 
FDE HMF1 HMF1  H  0 0 N N N 15.988 17.531 37.815 ? ? ? HMF1 FDE 56 
FDE HMF2 HMF2  H  0 0 N N N 15.460 16.892 39.408 ? ? ? HMF2 FDE 57 
FDE HMF3 HMF3  H  0 0 N N N 15.340 15.861 37.942 ? ? ? HMF3 FDE 58 
FDE HHD  HHD   H  0 1 N N N 15.300 19.098 36.626 ? ? ? HHD  FDE 59 
FDE HMD1 HMD1  H  0 0 N N N 16.763 22.158 34.910 ? ? ? HMD1 FDE 60 
FDE HMD2 HMD2  H  0 0 N N N 16.732 21.225 36.445 ? ? ? HMD2 FDE 61 
FDE HMD3 HMD3  H  0 0 N N N 16.621 20.368 34.871 ? ? ? HMD3 FDE 62 
FDE HAD1 HAD1  H  0 0 N N N 14.073 24.634 34.712 ? ? ? HAD1 FDE 63 
FDE HAD2 HAD2  H  0 0 N N N 15.612 23.786 34.336 ? ? ? HAD2 FDE 64 
FDE HBD1 HBD1  H  0 0 N N N 14.534 22.751 32.351 ? ? ? HBD1 FDE 65 
FDE HBD2 HBD2  H  0 0 N N N 13.024 23.652 32.717 ? ? ? HBD2 FDE 66 
FDE H1D  H1D   H  0 1 N N N 15.795 25.468 30.702 ? ? ? H1D  FDE 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
FDE CHA C1A  SING N N 1  
FDE CHA C4D  DOUB N N 2  
FDE CHA HHA  SING N N 3  
FDE C1A C2A  SING N N 4  
FDE C1A NA   DOUB N N 5  
FDE C2A CAA  SING N N 6  
FDE C2A C3A  DOUB N N 7  
FDE CAA CBA  SING N N 8  
FDE CAA HAA1 SING N N 9  
FDE CAA HAA2 SING N N 10 
FDE CBA CGA  SING N N 11 
FDE CBA HBA1 SING N N 12 
FDE CBA HBA2 SING N N 13 
FDE CGA O1A  SING N N 14 
FDE CGA O2A  DOUB N N 15 
FDE O1A H1A  SING N N 16 
FDE C3A CMA  SING N N 17 
FDE C3A C4A  SING N N 18 
FDE CMA HMA1 SING N N 19 
FDE CMA HMA2 SING N N 20 
FDE CMA HMA3 SING N N 21 
FDE C4A NA   SING N N 22 
FDE C4A CHB  DOUB N N 23 
FDE NA  FE   SING N N 24 
FDE CHB C1B  SING N N 25 
FDE CHB HHB  SING N N 26 
FDE C1B C2B  DOUB Y N 27 
FDE C1B NB   SING Y N 28 
FDE C2B C3B  SING Y N 29 
FDE C2B H2B  SING N N 30 
FDE C3B CME  SING N N 31 
FDE C3B C4B  DOUB Y N 32 
FDE CME HME1 SING N N 33 
FDE CME HME2 SING N N 34 
FDE CME HME3 SING N N 35 
FDE C4B NB   SING Y N 36 
FDE C4B CHC  SING N N 37 
FDE NB  FE   SING N N 38 
FDE CHC C1C  DOUB N N 39 
FDE CHC HHC  SING N N 40 
FDE C1C C2C  SING N N 41 
FDE C1C NC   SING N N 42 
FDE C2C C3C  DOUB N N 43 
FDE C2C H2C  SING N N 44 
FDE C3C CMF  SING N N 45 
FDE C3C C4C  SING N N 46 
FDE CMF HMF1 SING N N 47 
FDE CMF HMF2 SING N N 48 
FDE CMF HMF3 SING N N 49 
FDE C4C NC   DOUB N N 50 
FDE C4C CHD  SING N N 51 
FDE NC  FE   SING N N 52 
FDE CHD C1D  DOUB N N 53 
FDE CHD HHD  SING N N 54 
FDE C1D C2D  SING N N 55 
FDE C1D ND   SING N N 56 
FDE C2D CMD  SING N N 57 
FDE C2D C3D  DOUB N N 58 
FDE CMD HMD1 SING N N 59 
FDE CMD HMD2 SING N N 60 
FDE CMD HMD3 SING N N 61 
FDE C3D CAD  SING N N 62 
FDE C3D C4D  SING N N 63 
FDE CAD CBD  SING N N 64 
FDE CAD HAD1 SING N N 65 
FDE CAD HAD2 SING N N 66 
FDE CBD CGD  SING N N 67 
FDE CBD HBD1 SING N N 68 
FDE CBD HBD2 SING N N 69 
FDE CGD O1D  SING N N 70 
FDE CGD O2D  DOUB N N 71 
FDE O1D H1D  SING N N 72 
FDE C4D ND   SING N N 73 
FDE ND  FE   SING N N 74 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
FDE InChI            InChI                1.06  "InChI=1S/C30H30N4O4.Fe/c1-15-9-20-12-25-17(3)21(5-7-29(35)36)27(33-25)14-28-22(6-8-30(37)38)18(4)26(34-28)13-24-16(2)10-19(32-24)11-23(15)31-20;/h9-14H,5-8H2,1-4H3,(H4,31,32,33,34,35,36,37,38);/q;+2/p-2/b19-11-,20-12-,23-11-,24-13-,25-12-,26-13-,27-14-,28-14-;" 
FDE InChIKey         InChI                1.06  QQYZTXBVPVYDJC-RWRCOHKGSA-L                                                                                                                                                                                                                                            
FDE SMILES_CANONICAL CACTVS               3.385 "CC1=CC2=Cc3n4[Fe][N@@]5C(=CC1=N2)C(=C(CCC(O)=O)C5=CC6=NC(=Cc4cc3C)C(=C6CCC(O)=O)C)C"                                                                                                                                                                                  
FDE SMILES           CACTVS               3.385 "CC1=CC2=Cc3n4[Fe][N]5C(=CC1=N2)C(=C(CCC(O)=O)C5=CC6=NC(=Cc4cc3C)C(=C6CCC(O)=O)C)C"                                                                                                                                                                                    
FDE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2n3c1C=C4C=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8CCC(=O)O)C)C(=C(C7=C2)C)CCC(=O)O)C"                                                                                                                                                                            
FDE SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc2n3c1C=C4C=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8CCC(=O)O)C)C(=C(C7=C2)C)CCC(=O)O)C"                                                                                                                                                                            
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
FDE "Create component"  2005-09-13 RCSB 
FDE "Modify descriptor" 2023-09-23 RCSB 
# 
