data_D6E
# 
_chem_comp.id                                    D6E 
_chem_comp.name                                  "(2~{S})-2-[[(2~{S})-4-methyl-1-oxidanyl-1-oxidanylidene-pentan-2-yl]carbamoylamino]pentanedioic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H20 N2 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-12-30 
_chem_comp.pdbx_modified_date                    2019-01-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        304.296 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D6E 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6FE5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D6E OE1 O1  O 0 1 N N N 13.103 46.994 39.814 5.404  0.531  1.189  OE1 D6E 1  
D6E CD  C1  C 0 1 N N N 13.864 47.564 40.624 4.679  1.390  0.746  CD  D6E 2  
D6E OE2 O2  O 0 1 N N N 13.856 48.794 40.841 5.035  2.681  0.838  OE2 D6E 3  
D6E CG  C2  C 0 1 N N N 15.065 46.792 41.159 3.379  1.012  0.084  CG  D6E 4  
D6E CB  C3  C 0 1 N N N 14.801 45.263 41.354 3.220  -0.510 0.105  CB  D6E 5  
D6E CA  C4  C 0 1 N N S 16.153 44.559 41.692 1.900  -0.893 -0.567 CA  D6E 6  
D6E C   C5  C 0 1 N N N 17.109 44.685 40.457 1.800  -2.394 -0.656 C   D6E 7  
D6E OXT O3  O 0 1 N N N 16.980 43.824 39.547 0.887  -2.972 -0.115 OXT D6E 8  
D6E O   O4  O 0 1 N N N 17.992 45.585 40.431 2.724  -3.090 -1.337 O   D6E 9  
D6E N   N1  N 0 1 N N N 16.835 45.203 42.817 0.781  -0.375 0.223  N   D6E 10 
D6E CAR C6  C 0 1 N N N 18.099 44.864 43.162 -0.406 -0.132 -0.368 CAR D6E 11 
D6E OAF O5  O 0 1 N N N 18.593 43.810 42.730 -0.547 -0.342 -1.557 OAF D6E 12 
D6E NAN N2  N 0 1 N N N 18.678 45.637 44.059 -1.436 0.345  0.359  NAN D6E 13 
D6E CAU C7  C 0 1 N N S 20.062 45.425 44.522 -2.725 0.610  -0.283 CAU D6E 14 
D6E CAQ C8  C 0 1 N N N 20.222 46.007 45.909 -2.708 1.987  -0.895 CAQ D6E 15 
D6E OAI O6  O 0 1 N N N 19.779 47.163 46.118 -1.720 2.677  -0.804 OAI D6E 16 
D6E OAE O7  O 0 1 N N N 20.742 45.228 46.737 -3.791 2.448  -1.541 OAE D6E 17 
D6E CAL C9  C 0 1 N N N 20.943 46.170 43.477 -3.841 0.530  0.760  CAL D6E 18 
D6E CAS C10 C 0 1 N N N 22.410 46.299 43.905 -3.913 -0.892 1.322  CAS D6E 19 
D6E CAB C11 C 0 1 N N N 23.179 47.141 42.867 -4.927 -0.938 2.466  CAB D6E 20 
D6E CAA C12 C 0 1 N N N 23.039 44.884 43.949 -4.348 -1.856 0.215  CAA D6E 21 
D6E H1  H1  H 0 1 N N N 13.193 49.207 40.301 5.879  2.874  1.268  H1  D6E 22 
D6E H2  H2  H 0 1 N N N 15.897 46.912 40.450 2.550  1.472  0.622  H2  D6E 23 
D6E H3  H3  H 0 1 N N N 15.347 47.221 42.132 3.382  1.363  -0.948 H3  D6E 24 
D6E H4  H4  H 0 1 N N N 14.089 45.113 42.179 4.049  -0.969 -0.433 H4  D6E 25 
D6E H5  H5  H 0 1 N N N 14.384 44.839 40.429 3.217  -0.860 1.137  H5  D6E 26 
D6E H6  H6  H 0 1 N N N 15.969 43.495 41.904 1.865  -0.467 -1.570 H6  D6E 27 
D6E H7  H7  H 0 1 N N N 18.512 45.496 39.641 2.618  -4.050 -1.366 H7  D6E 28 
D6E H8  H8  H 0 1 N N N 16.357 45.908 43.341 0.893  -0.208 1.172  H8  D6E 29 
D6E H9  H9  H 0 1 N N N 18.157 46.400 44.442 -1.323 0.513  1.308  H9  D6E 30 
D6E H10 H10 H 0 1 N N N 20.315 44.354 44.525 -2.902 -0.132 -1.062 H10 D6E 31 
D6E H11 H11 H 0 1 N N N 20.762 45.641 47.592 -3.732 3.337  -1.917 H11 D6E 32 
D6E H12 H12 H 0 1 N N N 20.532 47.180 43.330 -3.633 1.229  1.570  H12 D6E 33 
D6E H13 H13 H 0 1 N N N 20.903 45.616 42.528 -4.793 0.785  0.295  H13 D6E 34 
D6E H14 H14 H 0 1 N N N 22.476 46.770 44.897 -2.932 -1.186 1.694  H14 D6E 35 
D6E H15 H15 H 0 1 N N N 24.231 47.233 43.175 -4.592 -0.289 3.275  H15 D6E 36 
D6E H16 H16 H 0 1 N N N 23.126 46.649 41.885 -5.898 -0.597 2.105  H16 D6E 37 
D6E H17 H17 H 0 1 N N N 22.728 48.142 42.800 -5.015 -1.961 2.833  H17 D6E 38 
D6E H18 H18 H 0 1 N N N 22.503 44.267 44.685 -3.625 -1.823 -0.600 H18 D6E 39 
D6E H19 H19 H 0 1 N N N 22.963 44.418 42.955 -4.399 -2.868 0.615  H19 D6E 40 
D6E H20 H20 H 0 1 N N N 24.098 44.962 44.237 -5.329 -1.562 -0.157 H20 D6E 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D6E OXT C   DOUB N N 1  
D6E OE1 CD  DOUB N N 2  
D6E O   C   SING N N 3  
D6E C   CA  SING N N 4  
D6E CD  OE2 SING N N 5  
D6E CD  CG  SING N N 6  
D6E CG  CB  SING N N 7  
D6E CB  CA  SING N N 8  
D6E CA  N   SING N N 9  
D6E OAF CAR DOUB N N 10 
D6E N   CAR SING N N 11 
D6E CAB CAS SING N N 12 
D6E CAR NAN SING N N 13 
D6E CAL CAS SING N N 14 
D6E CAL CAU SING N N 15 
D6E CAS CAA SING N N 16 
D6E NAN CAU SING N N 17 
D6E CAU CAQ SING N N 18 
D6E CAQ OAI DOUB N N 19 
D6E CAQ OAE SING N N 20 
D6E OE2 H1  SING N N 21 
D6E CG  H2  SING N N 22 
D6E CG  H3  SING N N 23 
D6E CB  H4  SING N N 24 
D6E CB  H5  SING N N 25 
D6E CA  H6  SING N N 26 
D6E O   H7  SING N N 27 
D6E N   H8  SING N N 28 
D6E NAN H9  SING N N 29 
D6E CAU H10 SING N N 30 
D6E OAE H11 SING N N 31 
D6E CAL H12 SING N N 32 
D6E CAL H13 SING N N 33 
D6E CAS H14 SING N N 34 
D6E CAB H15 SING N N 35 
D6E CAB H16 SING N N 36 
D6E CAB H17 SING N N 37 
D6E CAA H18 SING N N 38 
D6E CAA H19 SING N N 39 
D6E CAA H20 SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D6E InChI            InChI                1.03  "InChI=1S/C12H20N2O7/c1-6(2)5-8(11(19)20)14-12(21)13-7(10(17)18)3-4-9(15)16/h6-8H,3-5H2,1-2H3,(H,15,16)(H,17,18)(H,19,20)(H2,13,14,21)/t7-,8-/m0/s1" 
D6E InChIKey         InChI                1.03  BSGWCSGMXAVYRT-YUMQZZPRSA-N                                                                                                                          
D6E SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)N[C@@H](CCC(O)=O)C(O)=O)C(O)=O"                                                                                                   
D6E SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)N[CH](CCC(O)=O)C(O)=O)C(O)=O"                                                                                                      
D6E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)C[C@@H](C(=O)O)NC(=O)N[C@@H](CCC(=O)O)C(=O)O"                                                                                                  
D6E SMILES           "OpenEye OEToolkits" 2.0.6 "CC(C)CC(C(=O)O)NC(=O)NC(CCC(=O)O)C(=O)O"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
D6E "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-[[(2~{S})-4-methyl-1-oxidanyl-1-oxidanylidene-pentan-2-yl]carbamoylamino]pentanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D6E "Create component" 2017-12-30 RCSB 
D6E "Initial release"  2019-01-30 RCSB 
# 
