data_B3E
# 
_chem_comp.id                                    B3E 
_chem_comp.name                                  "(3S)-3-AMINOHEXANEDIOIC ACID" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H11 N O4" 
_chem_comp.mon_nstd_parent_comp_id               GLU 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2007-02-28 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        161.156 
_chem_comp.one_letter_code                       E 
_chem_comp.three_letter_code                     B3E 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        "OpenEye/OEToolkits V1.4.2" 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
B3E N    N    N 0 1 N N N Y Y N -3.923 -5.219 3.478 1.125  -1.960 0.018  N    B3E 1  
B3E CA   CB   C 0 1 N N S Y N N -3.635 -6.488 4.152 0.951  -3.339 0.484  CB   B3E 2  
B3E CG   CG   C 0 1 N N N N N N -4.245 -7.630 3.355 -0.437 -3.867 0.064  CG   B3E 3  
B3E CD   CD   C 0 1 N N N N N N -5.158 -8.465 4.254 -1.615 -3.035 0.586  CD   B3E 4  
B3E CE   CE   C 0 1 N N N N N N -6.560 -8.661 3.678 -2.962 -3.617 0.219  CE   B3E 5  
B3E OF2  OF2  O 0 1 N N N N N N -6.699 -8.336 2.482 -3.144 -4.607 -0.476 OF2  B3E 6  
B3E OF1  OF1  O 0 1 N N N N N N -7.497 -9.153 4.407 -3.978 -2.912 0.783  OF1  B3E 7  
B3E CB   CA   C 0 1 N N N Y N N -2.148 -6.708 4.216 2.081  -4.205 -0.091 CA   B3E 8  
B3E C    C    C 0 1 N N N Y N Y -1.505 -6.023 5.372 2.014  -5.633 0.387  C    B3E 9  
B3E O    O    O 0 1 N N N Y N Y -1.810 -6.392 6.483 1.521  -5.989 1.448  O    B3E 10 
B3E OXT  OXT  O 0 1 N Y N Y N Y -0.614 -5.064 5.099 2.583  -6.478 -0.507 OXT  B3E 11 
B3E H    H    H 0 1 N N N Y Y N -3.989 -4.488 4.157 1.909  -1.451 0.356  H    B3E 12 
B3E H2   H2   H 0 1 N Y N Y Y N -3.188 -5.010 2.833 0.358  -1.528 -0.445 H2   B3E 13 
B3E HA   HB   H 0 1 N N N Y N N -4.056 -6.454 5.168 1.021  -3.334 1.578  HB   B3E 14 
B3E HG2  HG2  H 0 1 N N N N N N -4.833 -7.218 2.521 -0.498 -3.917 -1.030 HG2  B3E 15 
B3E HG3  HG3  H 0 1 N N N N N N -3.439 -8.269 2.964 -0.557 -4.897 0.426  HG3  B3E 16 
B3E HD2  HD2  H 0 1 N N N N N N -4.699 -9.456 4.385 -1.554 -2.008 0.213  HD2  B3E 17 
B3E HD3  HD3  H 0 1 N N N N N N -5.267 -7.922 5.204 -1.565 -3.007 1.681  HD3  B3E 18 
B3E HOF1 HOF1 H 0 0 N N N N N N -8.293 -9.225 3.894 -4.877 -3.256 0.593  HOF1 B3E 19 
B3E HB1  HA1  H 0 1 N N N Y N N -1.963 -7.788 4.309 2.048  -4.228 -1.188 HA1  B3E 20 
B3E HB2  HA2  H 0 1 N N N Y N N -1.712 -6.286 3.298 3.064  -3.799 0.180  HA2  B3E 21 
B3E HXT  HXT  H 0 1 N Y N Y N Y -0.260 -4.720 5.911 2.551  -7.410 -0.201 HXT  B3E 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
B3E N   CA   SING N N 1  
B3E N   H    SING N N 2  
B3E N   H2   SING N N 3  
B3E CA  CG   SING N N 4  
B3E CA  CB   SING N N 5  
B3E CA  HA   SING N N 6  
B3E CG  CD   SING N N 7  
B3E CG  HG2  SING N N 8  
B3E CG  HG3  SING N N 9  
B3E CD  CE   SING N N 10 
B3E CD  HD2  SING N N 11 
B3E CD  HD3  SING N N 12 
B3E CE  OF2  DOUB N N 13 
B3E CE  OF1  SING N N 14 
B3E OF1 HOF1 SING N N 15 
B3E CB  C    SING N N 16 
B3E CB  HB1  SING N N 17 
B3E CB  HB2  SING N N 18 
B3E C   OXT  SING N N 19 
B3E C   O    DOUB N N 20 
B3E OXT HXT  SING N N 21 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
B3E SMILES           ACDLabs              10.04 "O=C(O)CCC(N)CC(=O)O"                                                               
B3E SMILES_CANONICAL CACTVS               3.341 "N[C@@H](CCC(O)=O)CC(O)=O"                                                          
B3E SMILES           CACTVS               3.341 "N[CH](CCC(O)=O)CC(O)=O"                                                            
B3E SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CC(=O)O)[C@@H](CC(=O)O)N"                                                        
B3E SMILES           "OpenEye OEToolkits" 1.5.0 "C(CC(=O)O)C(CC(=O)O)N"                                                             
B3E InChI            InChI                1.03  "InChI=1S/C6H11NO4/c7-4(3-6(10)11)1-2-5(8)9/h4H,1-3,7H2,(H,8,9)(H,10,11)/t4-/m0/s1" 
B3E InChIKey         InChI                1.03  XABCFXXGZPWJQP-BYPYZUCNSA-N                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
B3E "SYSTEMATIC NAME" ACDLabs              10.04 "(3S)-3-aminohexanedioic acid" 
B3E "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(3S)-3-aminohexanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
B3E "Create component"  2007-02-28 RCSB 
B3E "Modify descriptor" 2011-06-04 RCSB 
B3E "Modify backbone"   2023-11-03 PDBE 
B3E "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            B3E 
_pdbx_chem_comp_pcm.modified_residue_id                GLU 
_pdbx_chem_comp_pcm.type                               "Beta-amino acid" 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
