data_77E
# 
_chem_comp.id                                    77E 
_chem_comp.name                                  "(4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H21 N2 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-09-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        348.289 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     77E 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5T4L 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
77E O7  O1  O 0 1 N N N N N N -38.125 -23.374 11.102 -3.303 -3.194 -1.565 O7  77E 1  
77E P1  P1  P 0 1 N N N N N N -37.752 -22.265 10.116 -3.179 -2.812 -0.006 P1  77E 2  
77E O5  O2  O 0 1 N N N N N N -36.504 -21.523 10.629 -4.538 -3.217 0.756  O5  77E 3  
77E O6  O3  O 0 1 N N N N N N -38.897 -21.313 9.905  -2.041 -3.546 0.592  O6  77E 4  
77E O4  O4  O 0 1 N N N N N N -37.489 -22.863 8.657  -2.933 -1.228 0.141  O4  77E 5  
77E C17 C1  C 0 1 N N N N N N -36.761 -24.035 8.594  -1.755 -0.575 -0.338 C17 77E 6  
77E C16 C2  C 0 1 Y N N N N N -36.566 -24.533 7.204  -1.842 0.900  -0.043 C16 77E 7  
77E C15 C3  C 0 1 Y N N N N N -37.365 -25.573 6.752  -2.950 1.420  0.601  C15 77E 8  
77E N3  N1  N 0 1 Y N N N N N -37.215 -26.108 5.558  -3.037 2.709  0.863  N3  77E 9  
77E C13 C4  C 0 1 Y N N N N N -36.295 -25.671 4.728  -2.080 3.552  0.528  C13 77E 10 
77E C14 C5  C 0 1 N N N N N N -36.172 -26.350 3.359  -2.232 5.017  0.847  C14 77E 11 
77E C12 C6  C 0 1 Y N N N N N -35.444 -24.639 5.082  -0.938 3.105  -0.119 C12 77E 12 
77E O3  O5  O 0 1 N N N N N N -34.490 -24.202 4.184  0.045  3.978  -0.463 O3  77E 13 
77E C11 C7  C 0 1 Y N N N N N -35.568 -24.027 6.369  -0.811 1.750  -0.407 C11 77E 14 
77E C5  C8  C 0 1 N N N N N N -34.695 -22.869 6.786  0.413  1.221  -1.109 C5  77E 15 
77E C6  C9  C 0 1 N N N N N N -33.229 -23.233 6.675  1.468  0.832  -0.072 C6  77E 16 
77E C7  C10 C 0 1 N N R N N N -32.466 -22.567 7.814  2.711  0.295  -0.784 C7  77E 17 
77E C8  C11 C 0 1 N N N N N N -30.942 -22.777 7.783  3.715  -0.210 0.254  C8  77E 18 
77E C9  C12 C 0 1 N N N N N N -30.315 -22.560 9.212  4.903  -0.860 -0.460 C9  77E 19 
77E C10 C13 C 0 1 N N N N N N -30.478 -23.792 10.074 5.892  -1.357 0.562  C10 77E 20 
77E O2  O6  O 0 1 N N N N N N -30.426 -24.926 9.507  5.670  -1.208 1.740  O2  77E 21 
77E O1  O7  O 0 1 N N N N N N -30.682 -23.698 11.282 7.020  -1.967 0.163  O1  77E 22 
77E N2  N2  N 0 1 N N N N N N -33.025 -22.957 9.035  3.324  1.370  -1.576 N2  77E 23 
77E H1  H1  H 0 1 N N N N N N -39.019 -23.249 11.397 -4.029 -2.748 -2.022 H1  77E 24 
77E H2  H2  H 0 1 N N N N N N -36.698 -20.597 10.715 -4.750 -4.159 0.709  H2  77E 25 
77E H3  H3  H 0 1 N N N N N N -37.292 -24.807 9.170  -0.880 -0.994 0.160  H3  77E 26 
77E H4  H4  H 0 1 N N N N N N -35.773 -23.857 9.043  -1.668 -0.726 -1.414 H4  77E 27 
77E H5  H5  H 0 1 N N N N N N -38.137 -25.957 7.402  -3.755 0.761  0.892  H5  77E 28 
77E H6  H6  H 0 1 N N N N N N -36.922 -27.151 3.278  -2.725 5.521  0.015  H6  77E 29 
77E H7  H7  H 0 1 N N N N N N -36.341 -25.608 2.565  -2.833 5.132  1.749  H7  77E 30 
77E H8  H8  H 0 1 N N N N N N -35.165 -26.779 3.252  -1.248 5.458  1.007  H8  77E 31 
77E H9  H9  H 0 1 N N N N N N -33.989 -23.494 4.573  0.721  4.098  0.218  H9  77E 32 
77E H10 H10 H 0 1 N N N N N N -34.903 -22.008 6.134  0.144  0.346  -1.700 H10 77E 33 
77E H11 H11 H 0 1 N N N N N N -34.923 -22.603 7.829  0.817  1.992  -1.766 H11 77E 34 
77E H12 H12 H 0 1 N N N N N N -33.114 -24.325 6.742  1.737  1.707  0.519  H12 77E 35 
77E H13 H13 H 0 1 N N N N N N -32.833 -22.881 5.711  1.064  0.061  0.585  H13 77E 36 
77E H14 H14 H 0 1 N N N N N N -32.627 -21.485 7.701  2.426  -0.525 -1.443 H14 77E 37 
77E H15 H15 H 0 1 N N N N N N -30.727 -23.802 7.447  4.067  0.627  0.856  H15 77E 38 
77E H16 H16 H 0 1 N N N N N N -30.494 -22.059 7.080  3.233  -0.945 0.899  H16 77E 39 
77E H17 H17 H 0 1 N N N N N N -29.243 -22.337 9.103  4.551  -1.697 -1.063 H17 77E 40 
77E H18 H18 H 0 1 N N N N N N -30.818 -21.712 9.700  5.385  -0.125 -1.105 H18 77E 41 
77E H19 H19 H 0 1 N N N N N N -30.781 -24.566 11.655 7.624  -2.269 0.856  H19 77E 42 
77E H20 H20 H 0 1 N N N N N N -32.526 -22.522 9.785  3.596  2.142  -0.987 H20 77E 43 
77E H21 H21 H 0 1 N N N N N N -33.985 -22.678 9.066  4.109  1.025  -2.107 H21 77E 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
77E C14 C13 SING N N 1  
77E O3  C12 SING N N 2  
77E C13 C12 DOUB Y N 3  
77E C13 N3  SING Y N 4  
77E C12 C11 SING Y N 5  
77E N3  C15 DOUB Y N 6  
77E C11 C5  SING N N 7  
77E C11 C16 DOUB Y N 8  
77E C6  C5  SING N N 9  
77E C6  C7  SING N N 10 
77E C15 C16 SING Y N 11 
77E C16 C17 SING N N 12 
77E C8  C7  SING N N 13 
77E C8  C9  SING N N 14 
77E C7  N2  SING N N 15 
77E C17 O4  SING N N 16 
77E O4  P1  SING N N 17 
77E C9  C10 SING N N 18 
77E O2  C10 DOUB N N 19 
77E O6  P1  DOUB N N 20 
77E C10 O1  SING N N 21 
77E P1  O5  SING N N 22 
77E P1  O7  SING N N 23 
77E O7  H1  SING N N 24 
77E O5  H2  SING N N 25 
77E C17 H3  SING N N 26 
77E C17 H4  SING N N 27 
77E C15 H5  SING N N 28 
77E C14 H6  SING N N 29 
77E C14 H7  SING N N 30 
77E C14 H8  SING N N 31 
77E O3  H9  SING N N 32 
77E C5  H10 SING N N 33 
77E C5  H11 SING N N 34 
77E C6  H12 SING N N 35 
77E C6  H13 SING N N 36 
77E C7  H14 SING N N 37 
77E C8  H15 SING N N 38 
77E C8  H16 SING N N 39 
77E C9  H17 SING N N 40 
77E C9  H18 SING N N 41 
77E O1  H19 SING N N 42 
77E N2  H20 SING N N 43 
77E N2  H21 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
77E SMILES           ACDLabs              12.01 "OP(O)(=O)OCc1cnc(c(c1CCC(N)CCC(O)=O)O)C"                                                                                                        
77E InChI            InChI                1.03  "InChI=1S/C13H21N2O7P/c1-8-13(18)11(4-2-10(14)3-5-12(16)17)9(6-15-8)7-22-23(19,20)21/h6,10,18H,2-5,7,14H2,1H3,(H,16,17)(H2,19,20,21)/t10-/m1/s1" 
77E InChIKey         InChI                1.03  CFDRNBOOPNTUHH-SNVBAGLBSA-N                                                                                                                      
77E SMILES_CANONICAL CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(CC[C@@H](N)CCC(O)=O)c1O"                                                                                                 
77E SMILES           CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(CC[CH](N)CCC(O)=O)c1O"                                                                                                   
77E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(cn1)COP(=O)(O)O)CC[C@H](CCC(=O)O)N)O"                                                                                                  
77E SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(cn1)COP(=O)(O)O)CCC(CCC(=O)O)N)O"                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
77E "SYSTEMATIC NAME" ACDLabs              12.01 "(4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid"    
77E "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(4~{R})-4-azanyl-6-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
77E "Create component" 2016-09-08 RCSB 
77E "Initial release"  2017-03-29 RCSB 
77E "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            77E 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C5 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
