data_6NE
# 
_chem_comp.id                                    6NE 
_chem_comp.name                                  "(1S)-1,5-anhydro-1-[5-(naphthalen-2-yl)-1H-imidazol-2-yl]-D-glucitol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H20 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-11 
_chem_comp.pdbx_modified_date                    2016-08-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        356.373 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6NE 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JTU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6NE C6    C1  C 0 1 Y N N 36.289 24.886 31.763 2.734  0.015  -0.102 C6    6NE 1  
6NE C8    C2  C 0 1 Y N N 37.935 25.873 33.212 5.061  -0.014 0.515  C8    6NE 2  
6NE N5    N1  N 0 1 Y N N 34.649 24.002 30.026 0.226  0.010  -0.579 N5    6NE 3  
6NE C9    C3  C 0 1 Y N N 36.896 26.039 34.256 5.410  0.210  -0.841 C9    6NE 4  
6NE "O6'" O1  O 0 1 N N N 33.219 18.662 27.321 -4.281 3.552  -0.049 "O6'" 6NE 5  
6NE "C6'" C4  C 0 1 N N N 32.204 19.509 27.896 -4.957 2.384  0.422  "C6'" 6NE 6  
6NE "C5'" C5  C 0 1 N N R 32.405 20.988 27.516 -4.337 1.142  -0.220 "C5'" 6NE 7  
6NE "C4'" C6  C 0 1 N N S 32.547 21.192 25.994 -5.137 -0.098 0.187  "C4'" 6NE 8  
6NE "O4'" O2  O 0 1 N N N 31.370 20.743 25.322 -6.475 0.015  -0.303 "O4'" 6NE 9  
6NE "O5'" O3  O 0 1 N N N 33.551 21.526 28.168 -2.985 1.001  0.222  "O5'" 6NE 10 
6NE "C1'" C7  C 0 1 N N S 33.644 22.942 27.970 -2.301 -0.120 -0.340 "C1'" 6NE 11 
6NE "C2'" C8  C 0 1 N N R 33.923 23.196 26.477 -3.020 -1.410 0.062  "C2'" 6NE 12 
6NE "O2'" O4  O 0 1 N N N 34.008 24.587 26.221 -2.370 -2.529 -0.545 "O2'" 6NE 13 
6NE "C3'" C9  C 0 1 N N R 32.775 22.638 25.625 -4.475 -1.343 -0.410 "C3'" 6NE 14 
6NE "O3'" O5  O 0 1 N N N 33.054 22.737 24.216 -5.174 -2.511 0.026  "O3'" 6NE 15 
6NE C1    C10 C 0 1 Y N N 34.750 23.428 28.820 -0.884 -0.154 0.172  C1    6NE 16 
6NE N2    N2  N 0 1 Y N N 36.075 23.293 28.510 -0.532 -0.346 1.415  N2    6NE 17 
6NE C3    C11 C 0 1 Y N N 36.796 23.819 29.519 0.802  -0.314 1.512  C3    6NE 18 
6NE C4    C12 C 0 1 Y N N 35.909 24.276 30.466 1.307  -0.091 0.268  C4    6NE 19 
6NE C7    C13 C 0 1 Y N N 37.615 25.305 31.995 3.708  -0.110 0.874  C7    6NE 20 
6NE C12   C14 C 0 1 Y N N 39.231 26.311 33.476 6.079  -0.136 1.478  C12   6NE 21 
6NE C13   C15 C 0 1 Y N N 39.548 26.846 34.715 7.382  -0.038 1.096  C13   6NE 22 
6NE C14   C16 C 0 1 Y N N 38.582 26.975 35.706 7.724  0.182  -0.236 C14   6NE 23 
6NE C15   C17 C 0 1 Y N N 37.252 26.596 35.473 6.765  0.305  -1.195 C15   6NE 24 
6NE C10   C18 C 0 1 Y N N 35.590 25.621 33.993 4.396  0.333  -1.809 C10   6NE 25 
6NE C11   C19 C 0 1 Y N N 35.302 25.061 32.755 3.092  0.237  -1.444 C11   6NE 26 
6NE H1    H1  H 0 1 N N N 33.799 24.195 30.517 0.257  0.165  -1.536 H1    6NE 27 
6NE H2    H2  H 0 1 N N N 33.062 17.761 27.577 -4.623 4.379  0.317  H2    6NE 28 
6NE H3    H3  H 0 1 N N N 31.219 19.180 27.533 -4.859 2.320  1.506  H3    6NE 29 
6NE H4    H4  H 0 1 N N N 32.242 19.415 28.991 -6.012 2.442  0.155  H4    6NE 30 
6NE H5    H5  H 0 1 N N N 31.512 21.540 27.844 -4.355 1.246  -1.305 H5    6NE 31 
6NE H6    H6  H 0 1 N N N 33.412 20.605 25.651 -5.154 -0.180 1.274  H6    6NE 32 
6NE H7    H7  H 0 1 N N N 31.208 19.833 25.541 -7.040 -0.737 -0.081 H7    6NE 33 
6NE H8    H8  H 0 1 N N N 32.704 23.438 28.253 -2.292 -0.033 -1.427 H8    6NE 34 
6NE H9    H9  H 0 1 N N N 34.858 22.690 26.196 -2.993 -1.519 1.147  H9    6NE 35 
6NE H10   H10 H 0 1 N N N 34.713 24.962 26.736 -2.774 -3.381 -0.333 H10   6NE 36 
6NE H11   H11 H 0 1 N N N 31.864 23.207 25.860 -4.503 -1.285 -1.498 H11   6NE 37 
6NE H12   H12 H 0 1 N N N 33.197 23.647 23.984 -4.807 -3.339 -0.315 H12   6NE 38 
6NE H14   H14 H 0 1 N N N 37.873 23.872 29.574 1.377  -0.443 2.418  H14   6NE 39 
6NE H15   H15 H 0 1 N N N 38.369 25.183 31.232 3.428  -0.280 1.903  H15   6NE 40 
6NE H16   H16 H 0 1 N N N 39.991 26.233 32.713 5.828  -0.306 2.514  H16   6NE 41 
6NE H17   H17 H 0 1 N N N 40.560 27.167 34.913 8.162  -0.132 1.837  H17   6NE 42 
6NE H18   H18 H 0 1 N N N 38.860 27.373 36.671 8.765  0.256  -0.513 H18   6NE 43 
6NE H19   H19 H 0 1 N N N 36.507 26.738 36.241 7.046  0.475  -2.224 H19   6NE 44 
6NE H20   H20 H 0 1 N N N 34.817 25.731 34.739 4.655  0.504  -2.844 H20   6NE 45 
6NE H21   H21 H 0 1 N N N 34.289 24.749 32.545 2.320  0.332  -2.193 H21   6NE 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6NE "O3'" "C3'" SING N N 1  
6NE "O4'" "C4'" SING N N 2  
6NE "C3'" "C4'" SING N N 3  
6NE "C3'" "C2'" SING N N 4  
6NE "C4'" "C5'" SING N N 5  
6NE "O2'" "C2'" SING N N 6  
6NE "C2'" "C1'" SING N N 7  
6NE "O6'" "C6'" SING N N 8  
6NE "C5'" "C6'" SING N N 9  
6NE "C5'" "O5'" SING N N 10 
6NE "C1'" "O5'" SING N N 11 
6NE "C1'" C1    SING N N 12 
6NE N2    C1    DOUB Y N 13 
6NE N2    C3    SING Y N 14 
6NE C1    N5    SING Y N 15 
6NE C3    C4    DOUB Y N 16 
6NE N5    C4    SING Y N 17 
6NE C4    C6    SING N N 18 
6NE C6    C7    DOUB Y N 19 
6NE C6    C11   SING Y N 20 
6NE C7    C8    SING Y N 21 
6NE C11   C10   DOUB Y N 22 
6NE C8    C12   DOUB Y N 23 
6NE C8    C9    SING Y N 24 
6NE C12   C13   SING Y N 25 
6NE C10   C9    SING Y N 26 
6NE C9    C15   DOUB Y N 27 
6NE C13   C14   DOUB Y N 28 
6NE C15   C14   SING Y N 29 
6NE N5    H1    SING N N 30 
6NE "O6'" H2    SING N N 31 
6NE "C6'" H3    SING N N 32 
6NE "C6'" H4    SING N N 33 
6NE "C5'" H5    SING N N 34 
6NE "C4'" H6    SING N N 35 
6NE "O4'" H7    SING N N 36 
6NE "C1'" H8    SING N N 37 
6NE "C2'" H9    SING N N 38 
6NE "O2'" H10   SING N N 39 
6NE "C3'" H11   SING N N 40 
6NE "O3'" H12   SING N N 41 
6NE C3    H14   SING N N 42 
6NE C7    H15   SING N N 43 
6NE C12   H16   SING N N 44 
6NE C13   H17   SING N N 45 
6NE C14   H18   SING N N 46 
6NE C15   H19   SING N N 47 
6NE C10   H20   SING N N 48 
6NE C11   H21   SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6NE SMILES           ACDLabs              12.01 "c2(cc1ccccc1cc2)c4nc(C3OC(CO)C(O)C(C3O)O)nc4"                                                                                                                     
6NE InChI            InChI                1.03  "InChI=1S/C19H20N2O5/c22-9-14-15(23)16(24)17(25)18(26-14)19-20-8-13(21-19)12-6-5-10-3-1-2-4-11(10)7-12/h1-8,14-18,22-25H,9H2,(H,20,21)/t14-,15-,16+,17-,18-/m1/s1" 
6NE InChIKey         InChI                1.03  AXGMUNPLTDCCLX-UYTYNIKBSA-N                                                                                                                                        
6NE SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)c2[nH]c(cn2)c3ccc4ccccc4c3"                                                                                              
6NE SMILES           CACTVS               3.385 "OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)c2[nH]c(cn2)c3ccc4ccccc4c3"                                                                                                     
6NE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1ccc2cc(ccc2c1)c3cnc([nH]3)[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O"                                                                                          
6NE SMILES           "OpenEye OEToolkits" 2.0.4 "c1ccc2cc(ccc2c1)c3cnc([nH]3)C4C(C(C(C(O4)CO)O)O)O"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6NE "SYSTEMATIC NAME" ACDLabs              12.01 "(1S)-1,5-anhydro-1-[5-(naphthalen-2-yl)-1H-imidazol-2-yl]-D-glucitol"                                         
6NE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(5-naphthalen-2-yl-1~{H}-imidazol-2-yl)oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6NE "Create component" 2016-05-11 EBI  
6NE "Initial release"  2016-08-23 RCSB 
# 
