data_5VE
# 
_chem_comp.id                                    5VE 
_chem_comp.name                                  "~{N}'-[(1~{R},2~{R})-2-(carbamimidamidomethyl)-6-(methylaminomethyl)-2,3-dihydro-1~{H}-inden-1-yl]-~{N}-(4-chloranyl-3-fluoranyl-phenyl)ethanediamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H24 Cl F N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-09 
_chem_comp.pdbx_modified_date                    2016-03-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        446.906 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5VE 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5F4L 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5VE C10  C1  C  0 1 Y N N -17.928 -59.655 21.210 3.098  -3.004 -0.591 C10  5VE 1  
5VE C13  C2  C  0 1 N N R -15.430 -59.298 18.231 2.030  0.603  0.258  C13  5VE 2  
5VE C15  C3  C  0 1 N N N -13.507 -57.788 17.761 -0.331 0.163  0.667  C15  5VE 3  
5VE C17  C4  C  0 1 N N N -13.045 -56.320 17.590 -1.773 0.299  0.301  C17  5VE 4  
5VE C20  C5  C  0 1 Y N N -11.250 -54.666 17.111 -4.072 -0.068 0.782  C20  5VE 5  
5VE C21  C6  C  0 1 Y N N -11.589 -53.602 17.943 -4.494 0.048  -0.536 C21  5VE 6  
5VE C22  C7  C  0 1 Y N N -11.109 -52.340 17.663 -5.832 0.253  -0.817 C22  5VE 7  
5VE C24  C8  C  0 1 Y N N -10.292 -52.133 16.551 -6.752 0.343  0.217  C24  5VE 8  
5VE C26  C9  C  0 1 Y N N -9.960  -53.193 15.720 -6.332 0.229  1.530  C26  5VE 9  
5VE N    N1  N  0 1 N N N -18.792 -58.658 23.284 4.056  -4.745 0.808  N    5VE 10 
5VE C    C10 C  0 1 N N N -18.935 -58.839 24.730 3.956  -6.130 1.288  C    5VE 11 
5VE C00  C11 C  0 1 N N N -18.012 -59.780 22.727 2.963  -4.430 -0.121 C00  5VE 12 
5VE CL25 CL1 CL 0 0 N N N -9.669  -50.547 16.172 -8.431 0.601  -0.137 CL25 5VE 13 
5VE N01  N2  N  0 1 N N N -13.367 -63.074 17.888 6.517  4.851  0.014  N01  5VE 14 
5VE C02  C12 C  0 1 N N N -13.102 -62.411 16.796 5.866  3.765  0.549  C02  5VE 15 
5VE N03  N3  N  0 1 N N N -14.137 -61.625 16.171 4.750  3.257  -0.072 N03  5VE 16 
5VE C04  C13 C  0 1 N N N -15.465 -61.575 16.750 4.056  2.100  0.498  C04  5VE 17 
5VE C05  C14 C  0 1 N N R -15.909 -60.094 17.070 2.857  1.740  -0.381 C05  5VE 18 
5VE C06  C15 C  0 1 N N N -17.325 -59.642 16.946 3.321  1.106  -1.709 C06  5VE 19 
5VE C07  C16 C  0 1 Y N N -17.768 -59.422 18.417 3.342  -0.385 -1.451 C07  5VE 20 
5VE C08  C17 C  0 1 Y N N -19.034 -59.415 19.044 3.957  -1.408 -2.152 C08  5VE 21 
5VE C09  C18 C  0 1 Y N N -19.112 -59.530 20.435 3.835  -2.716 -1.724 C09  5VE 22 
5VE C11  C19 C  0 1 Y N N -16.657 -59.663 20.583 2.480  -1.985 0.108  C11  5VE 23 
5VE C12  C20 C  0 1 Y N N -16.583 -59.547 19.204 2.601  -0.674 -0.320 C12  5VE 24 
5VE N14  N4  N  0 1 N N N -14.901 -58.025 18.067 0.616  0.737  -0.101 N14  5VE 25 
5VE O16  O1  O  0 1 N N N -12.712 -58.728 17.647 -0.013 -0.464 1.656  O16  5VE 26 
5VE O18  O2  O  0 1 N N N -13.867 -55.430 17.715 -2.091 0.926  -0.689 O18  5VE 27 
5VE N19  N5  N  0 1 N N N -11.714 -56.017 17.310 -2.720 -0.275 1.069  N19  5VE 28 
5VE C27  C21 C  0 1 Y N N -10.440 -54.446 15.998 -4.996 0.029  1.815  C27  5VE 29 
5VE N28  N6  N  0 1 N N N -11.875 -62.460 16.261 6.307  3.216  1.646  N28  5VE 30 
5VE F23  F1  F  0 1 N N N -11.431 -51.299 18.476 -6.244 0.366  -2.099 F23  5VE 31 
5VE H1   H1  H  0 1 N N N -14.607 -59.899 18.645 2.147  0.613  1.341  H1   5VE 32 
5VE H2   H2  H  0 1 N N N -12.224 -53.764 18.802 -3.777 -0.022 -1.341 H2   5VE 33 
5VE H3   H3  H  0 1 N N N -9.327  -53.032 14.860 -7.050 0.303  2.334  H3   5VE 34 
5VE H4   H4  H  0 1 N N N -18.317 -57.797 23.100 4.954  -4.574 0.382  H4   5VE 35 
5VE H6   H6  H  0 1 N N N -19.516 -58.004 25.149 3.007  -6.268 1.805  H6   5VE 36 
5VE H7   H7  H  0 1 N N N -19.457 -59.786 24.931 4.011  -6.813 0.440  H7   5VE 37 
5VE H8   H8  H  0 1 N N N -17.939 -58.863 25.197 4.777  -6.337 1.974  H8   5VE 38 
5VE H9   H9  H  0 1 N N N -18.503 -60.729 22.988 2.006  -4.557 0.386  H9   5VE 39 
5VE H10  H10 H  0 1 N N N -16.997 -59.764 23.151 3.010  -5.101 -0.979 H10  5VE 40 
5VE H11  H11 H  0 1 N N N -12.653 -63.620 18.327 6.189  5.259  -0.803 H11  5VE 41 
5VE H12  H12 H  0 1 N N N -14.284 -63.036 18.286 7.305  5.209  0.452  H12  5VE 42 
5VE H13  H13 H  0 1 N N N -13.938 -61.113 15.336 4.422  3.665  -0.889 H13  5VE 43 
5VE H14  H14 H  0 1 N N N -16.180 -62.016 16.040 4.740  1.252  0.544  H14  5VE 44 
5VE H15  H15 H  0 1 N N N -15.469 -62.158 17.683 3.711  2.343  1.503  H15  5VE 45 
5VE H16  H16 H  0 1 N N N -15.439 -59.557 16.233 2.235  2.616  -0.562 H16  5VE 46 
5VE H17  H17 H  0 1 N N N -17.390 -58.706 16.372 2.616  1.342  -2.507 H17  5VE 47 
5VE H18  H18 H  0 1 N N N -17.942 -60.413 16.461 4.319  1.460  -1.969 H18  5VE 48 
5VE H19  H19 H  0 1 N N N -19.934 -59.322 18.454 4.532  -1.184 -3.039 H19  5VE 49 
5VE H20  H20 H  0 1 N N N -20.076 -59.524 20.922 4.315  -3.512 -2.273 H20  5VE 50 
5VE H21  H21 H  0 1 N N N -15.757 -59.758 21.173 1.901  -2.212 0.991  H21  5VE 51 
5VE H22  H22 H  0 1 N N N -15.510 -57.238 18.165 0.362  1.238  -0.892 H22  5VE 52 
5VE H23  H23 H  0 1 N N N -11.055 -56.766 17.244 -2.463 -0.831 1.820  H23  5VE 53 
5VE H24  H24 H  0 1 N N N -10.188 -55.271 15.348 -4.670 -0.060 2.841  H24  5VE 54 
5VE H25  H25 H  0 1 N N N -11.257 -63.038 16.794 7.095  3.575  2.085  H25  5VE 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5VE C26  C27 DOUB Y N 1  
5VE C26  C24 SING Y N 2  
5VE C27  C20 SING Y N 3  
5VE N03  C04 SING N N 4  
5VE N03  C02 SING N N 5  
5VE CL25 C24 SING N N 6  
5VE N28  C02 DOUB N N 7  
5VE C24  C22 DOUB Y N 8  
5VE C04  C05 SING N N 9  
5VE C02  N01 SING N N 10 
5VE C06  C05 SING N N 11 
5VE C06  C07 SING N N 12 
5VE C05  C13 SING N N 13 
5VE C20  N19 SING N N 14 
5VE C20  C21 DOUB Y N 15 
5VE N19  C17 SING N N 16 
5VE C17  O18 DOUB N N 17 
5VE C17  C15 SING N N 18 
5VE O16  C15 DOUB N N 19 
5VE C22  C21 SING Y N 20 
5VE C22  F23 SING N N 21 
5VE C15  N14 SING N N 22 
5VE N14  C13 SING N N 23 
5VE C13  C12 SING N N 24 
5VE C07  C08 DOUB Y N 25 
5VE C07  C12 SING Y N 26 
5VE C08  C09 SING Y N 27 
5VE C12  C11 DOUB Y N 28 
5VE C09  C10 DOUB Y N 29 
5VE C11  C10 SING Y N 30 
5VE C10  C00 SING N N 31 
5VE C00  N   SING N N 32 
5VE N    C   SING N N 33 
5VE C13  H1  SING N N 34 
5VE C21  H2  SING N N 35 
5VE C26  H3  SING N N 36 
5VE N    H4  SING N N 37 
5VE C    H6  SING N N 38 
5VE C    H7  SING N N 39 
5VE C    H8  SING N N 40 
5VE C00  H9  SING N N 41 
5VE C00  H10 SING N N 42 
5VE N01  H11 SING N N 43 
5VE N01  H12 SING N N 44 
5VE N03  H13 SING N N 45 
5VE C04  H14 SING N N 46 
5VE C04  H15 SING N N 47 
5VE C05  H16 SING N N 48 
5VE C06  H17 SING N N 49 
5VE C06  H18 SING N N 50 
5VE C08  H19 SING N N 51 
5VE C09  H20 SING N N 52 
5VE C11  H21 SING N N 53 
5VE N14  H22 SING N N 54 
5VE N19  H23 SING N N 55 
5VE C27  H24 SING N N 56 
5VE N28  H25 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5VE InChI            InChI                1.03  "InChI=1S/C21H24ClFN6O2/c1-26-9-11-2-3-12-7-13(10-27-21(24)25)18(15(12)6-11)29-20(31)19(30)28-14-4-5-16(22)17(23)8-14/h2-6,8,13,18,26H,7,9-10H2,1H3,(H,28,30)(H,29,31)(H4,24,25,27)/t13-,18-/m1/s1" 
5VE InChIKey         InChI                1.03  XFJPCFZRCFHOOP-FZKQIMNGSA-N                                                                                                                                                                         
5VE SMILES_CANONICAL CACTVS               3.385 "CNCc1ccc2C[C@H](CNC(N)=N)[C@@H](NC(=O)C(=O)Nc3ccc(Cl)c(F)c3)c2c1"                                                                                                                                  
5VE SMILES           CACTVS               3.385 "CNCc1ccc2C[CH](CNC(N)=N)[CH](NC(=O)C(=O)Nc3ccc(Cl)c(F)c3)c2c1"                                                                                                                                     
5VE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "[H]/N=C(/N)\NC[C@H]1Cc2ccc(cc2[C@@H]1NC(=O)C(=O)Nc3ccc(c(c3)F)Cl)CNC"                                                                                                                              
5VE SMILES           "OpenEye OEToolkits" 2.0.4 "CNCc1ccc2c(c1)C(C(C2)CNC(=N)N)NC(=O)C(=O)Nc3ccc(c(c3)F)Cl"                                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5VE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}'-[(1~{R},2~{R})-2-(carbamimidamidomethyl)-6-(methylaminomethyl)-2,3-dihydro-1~{H}-inden-1-yl]-~{N}-(4-chloranyl-3-fluoranyl-phenyl)ethanediamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5VE "Create component" 2015-12-09 RCSB 
5VE "Initial release"  2016-03-30 RCSB 
# 
