data_25E
#

_chem_comp.id                                   25E
_chem_comp.name                                 "N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucopyranosylamine"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C14 H19 N3 O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;4-hydroxybenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone;
N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucosylamine;
N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-D-glucosylamine;
N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-glucosylamine
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-05-03
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       357.382
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    25E
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3MTD
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  25E  "4-hydroxybenzaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone"                       PDB  ?  
2  25E  "N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-beta-D-glucosylamine"  PDB  ?  
3  25E  "N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-D-glucosylamine"       PDB  ?  
4  25E  "N-({(2Z)-2-[(4-hydroxyphenyl)methylidene]hydrazino}carbonothioyl)-glucosylamine"         PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
25E  C1    C1    C  0  1  N  N  R  33.597  22.829  27.785  -2.003  -0.352  -0.265  C1    25E   1  
25E  C2    C2    C  0  1  N  N  R  33.869  23.102  26.303  -2.964  -1.496   0.066  C2    25E   2  
25E  O2    O2    O  0  1  N  N  N  34.021  24.514  26.079  -2.638  -2.639  -0.726  O2    25E   3  
25E  C3    C3    C  0  1  N  N  S  32.704  22.532  25.476  -4.398  -1.052  -0.240  C3    25E   4  
25E  O3    O3    O  0  1  N  N  N  32.975  22.676  24.079  -5.309  -2.086   0.136  O3    25E   5  
25E  C4    C4    C  0  1  N  N  S  32.445  21.052  25.819  -4.709   0.219   0.558  C4    25E   6  
25E  O4    O4    O  0  1  N  N  N  31.241  20.637  25.192  -6.019   0.683   0.225  O4    25E   7  
25E  C5    C5    C  0  1  N  N  R  32.323  20.827  27.348  -3.680   1.296   0.207  C5    25E   8  
25E  O5    O5    O  0  1  N  N  N  33.467  21.393  28.019  -2.366   0.808   0.487  O5    25E   9  
25E  C6    C6    C  0  1  N  N  N  32.189  19.353  27.790  -3.947   2.549   1.044  C6    25E  10  
25E  O6    O6    O  0  1  N  N  N  33.232  18.541  27.227  -3.061   3.593   0.635  O6    25E  11  
25E  NAL   NAL   N  0  1  N  N  N  34.700  23.246  28.649  -0.635  -0.748   0.079  NAL   25E  12  
25E  CAM   CAM   C  0  1  N  N  N  34.495  23.953  29.761   0.399  -0.329  -0.678  CAM   25E  13  
25E  NAN   NAN   N  0  1  N  N  N  35.560  24.267  30.496   1.657  -0.693  -0.361  NAN   25E  14  
25E  SAO   SAO   S  0  1  N  N  N  32.890  24.463  30.245   0.113   0.668  -2.040  SAO   25E  15  
25E  NAP   NAP   N  0  1  N  N  N  36.692  23.905  30.147   1.891  -1.508   0.754  NAP   25E  16  
25E  CAQ   CAQ   C  0  1  N  N  N  37.772  24.202  30.857   3.107  -1.763   1.129  CAQ   25E  17  
25E  CAR   CAR   C  0  1  Y  N  N  37.732  24.936  32.051   4.205  -0.866   0.726  CAR   25E  18  
25E  CAS   CAS   C  0  1  Y  N  N  36.506  25.240  32.650   3.921   0.393   0.190  CAS   25E  19  
25E  CAT   CAT   C  0  1  Y  N  N  36.453  25.962  33.835   4.951   1.229  -0.185  CAT   25E  20  
25E  CAU   CAU   C  0  1  Y  N  N  37.631  26.384  34.438   6.270   0.821  -0.032  CAU   25E  21  
25E  CAV   CAV   C  0  1  Y  N  N  38.867  26.088  33.854   6.557  -0.430   0.500  CAV   25E  22  
25E  CAW   CAW   C  0  1  Y  N  N  38.916  25.359  32.660   5.534  -1.270   0.883  CAW   25E  23  
25E  OAX   OAX   O  0  1  N  N  N  37.552  27.086  35.600   7.282   1.647  -0.404  OAX   25E  24  
25E  H1    H1    H  0  1  N  N  N  32.682  23.393  28.020  -2.059  -0.126  -1.331  H1    25E  25  
25E  H2    H2    H  0  1  N  N  N  34.805  22.613  25.993  -2.879  -1.748   1.123  H2    25E  26  
25E  HO2   HO2   H  0  1  N  Y  N  34.189  24.673  25.158  -1.741  -2.971  -0.586  HO2   25E  27  
25E  H3    H3    H  0  1  N  N  N  31.797  23.101  25.728  -4.497  -0.846  -1.306  H3    25E  28  
25E  HO3   HO3   H  0  1  N  Y  N  32.250  22.321  23.577  -5.166  -2.924  -0.326  HO3   25E  29  
25E  H4    H4    H  0  1  N  N  N  33.300  20.463  25.456  -4.659   0.001   1.625  H4    25E  30  
25E  HO4   HO4   H  0  1  N  Y  N  31.074  19.725  25.399  -6.722   0.047   0.417  HO4   25E  31  
25E  H5    H5    H  0  1  N  N  N  31.383  21.325  27.629  -3.758   1.543  -0.852  H5    25E  32  
25E  H61   H6    H  0  1  N  N  N  32.253  19.304  28.887  -4.978   2.870   0.899  H61   25E  33  
25E  H62   H6A   H  0  1  N  N  N  31.216  18.967  27.451  -3.781   2.324   2.098  H62   25E  34  
25E  HO6   HO6   H  0  1  N  Y  N  33.125  17.642  27.515  -3.175   4.419   1.125  HO6   25E  35  
25E  HNAL  HNAL  H  0  0  N  N  N  35.635  22.994  28.399  -0.473  -1.312   0.851  HNAL  25E  36  
25E  HNAN  HNAN  H  0  0  N  N  N  35.445  24.799  31.335   2.401  -0.391  -0.906  HNAN  25E  37  
25E  HAQ   HAQ   H  0  1  N  N  N  38.731  23.861  30.497   3.314  -2.632   1.735  HAQ   25E  38  
25E  HAS   HAS   H  0  1  N  N  N  35.589  24.909  32.185   2.896   0.711   0.070  HAS   25E  39  
25E  HAT   HAT   H  0  1  N  N  N  35.500  26.194  34.286   4.732   2.202  -0.599  HAT   25E  40  
25E  HAV   HAV   H  0  1  N  N  N  39.781  26.421  34.323   7.584  -0.743   0.617  HAV   25E  41  
25E  HAW   HAW   H  0  1  N  N  N  39.869  25.124  32.210   5.758  -2.240   1.301  HAW   25E  42  
25E  HOAX  HOAX  H  0  0  N  N  N  38.427  27.308  35.897   7.588   2.235   0.300  HOAX  25E  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
25E  C2   C1    SING  N  N   1  
25E  C1   O5    SING  N  N   2  
25E  C1   NAL   SING  N  N   3  
25E  C1   H1    SING  N  N   4  
25E  C3   C2    SING  N  N   5  
25E  O2   C2    SING  N  N   6  
25E  C2   H2    SING  N  N   7  
25E  O2   HO2   SING  N  N   8  
25E  O3   C3    SING  N  N   9  
25E  C3   C4    SING  N  N  10  
25E  C3   H3    SING  N  N  11  
25E  O3   HO3   SING  N  N  12  
25E  O4   C4    SING  N  N  13  
25E  C4   C5    SING  N  N  14  
25E  C4   H4    SING  N  N  15  
25E  O4   HO4   SING  N  N  16  
25E  C5   C6    SING  N  N  17  
25E  C5   O5    SING  N  N  18  
25E  C5   H5    SING  N  N  19  
25E  O6   C6    SING  N  N  20  
25E  C6   H61   SING  N  N  21  
25E  C6   H62   SING  N  N  22  
25E  O6   HO6   SING  N  N  23  
25E  NAL  CAM   SING  N  N  24  
25E  NAL  HNAL  SING  N  N  25  
25E  CAM  SAO   DOUB  N  N  26  
25E  CAM  NAN   SING  N  N  27  
25E  NAP  NAN   SING  N  N  28  
25E  NAN  HNAN  SING  N  N  29  
25E  NAP  CAQ   DOUB  N  Z  30  
25E  CAQ  CAR   SING  N  N  31  
25E  CAQ  HAQ   SING  N  N  32  
25E  CAR  CAS   DOUB  Y  N  33  
25E  CAR  CAW   SING  Y  N  34  
25E  CAS  CAT   SING  Y  N  35  
25E  CAS  HAS   SING  N  N  36  
25E  CAT  CAU   DOUB  Y  N  37  
25E  CAT  HAT   SING  N  N  38  
25E  CAV  CAU   SING  Y  N  39  
25E  CAU  OAX   SING  N  N  40  
25E  CAW  CAV   DOUB  Y  N  41  
25E  CAV  HAV   SING  N  N  42  
25E  CAW  HAW   SING  N  N  43  
25E  OAX  HOAX  SING  N  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
25E  SMILES            ACDLabs               12.01  "S=C(NC1OC(C(O)C(O)C1O)CO)N/N=C\c2ccc(O)cc2"  
25E  SMILES_CANONICAL  CACTVS                3.370  "OC[C@H]1O[C@@H](NC(=S)N\N=C/c2ccc(O)cc2)[C@H](O)[C@@H](O)[C@@H]1O"  
25E  SMILES            CACTVS                3.370  "OC[CH]1O[CH](NC(=S)NN=Cc2ccc(O)cc2)[CH](O)[CH](O)[CH]1O"  
25E  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "c1cc(ccc1/C=N\NC(=S)N[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O"  
25E  SMILES            "OpenEye OEToolkits"  1.7.0  "c1cc(ccc1C=NNC(=S)NC2C(C(C(C(O2)CO)O)O)O)O"  
25E  InChI             InChI                 1.03   "InChI=1S/C14H19N3O6S/c18-6-9-10(20)11(21)12(22)13(23-9)16-14(24)17-15-5-7-1-3-8(19)4-2-7/h1-5,9-13,18-22H,6H2,(H2,16,17,24)/b15-5-/t9-,10-,11+,12-,13-/m1/s1"  
25E  InChIKey          InChI                 1.03   QWGDGYDWAFWBHA-ARDSGTFASA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
25E  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{[(2Z)-2-(4-hydroxybenzylidene)hydrazinyl]carbothioyl}-beta-D-glucopyranosylamine"  
25E  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "1-[(Z)-(4-hydroxyphenyl)methylideneamino]-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]thiourea"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
25E  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
25E  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
25E  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
25E  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
25E  "Create component"          2010-05-03  RCSB  
25E  "Modify aromatic_flag"      2011-06-04  RCSB  
25E  "Modify descriptor"         2011-06-04  RCSB  
25E  "Other modification"        2020-07-03  RCSB  
25E  "Modify synonyms"           2020-07-17  RCSB  
25E  "Modify internal type"      2020-07-17  RCSB  
25E  "Modify linking type"       2020-07-17  RCSB  
25E  "Modify atom id"            2020-07-17  RCSB  
25E  "Modify component atom id"  2020-07-17  RCSB  
25E  "Modify leaving atom flag"  2020-07-17  RCSB  
##
