data_V1D
#

_chem_comp.id                                   V1D
_chem_comp.name                                 "N-[(1S)-1-[4-(2-fluorophenyl)-1H-imidazol-2-yl]-7,7-dihydroxy-7-(1,2-oxazol-3-yl)heptyl]-1-methylazetidine-3-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H30 F N5 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-12
_chem_comp.pdbx_modified_date                   2020-07-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       471.525
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V1D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XDM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V1D  F    F1   F  0  1  N  N  N  74.025  38.438   2.417    3.328   3.728  -0.449  F    V1D   1  
V1D  C23  C1   C  0  1  Y  N  N  74.375  37.578   3.400    4.587   3.569   0.013  C23  V1D   2  
V1D  C22  C2   C  0  1  Y  N  N  74.662  38.100   4.639    5.347   4.675   0.348  C22  V1D   3  
V1D  C21  C3   C  0  1  Y  N  N  74.969  37.227   5.665    6.636   4.512   0.821  C21  V1D   4  
V1D  C20  C4   C  0  1  Y  N  N  74.994  35.868   5.438    7.173   3.245   0.962  C20  V1D   5  
V1D  C19  C5   C  0  1  Y  N  N  74.717  35.365   4.178    6.424   2.134   0.631  C19  V1D   6  
V1D  C18  C6   C  0  1  Y  N  N  74.396  36.217   3.124    5.123   2.289   0.159  C18  V1D   7  
V1D  C17  C7   C  0  1  Y  N  N  74.090  35.661   1.795    4.312   1.098  -0.194  C17  V1D   8  
V1D  C16  C8   C  0  1  Y  N  N  73.477  36.247   0.727    4.708  -0.198  -0.101  C16  V1D   9  
V1D  N3   N1   N  0  1  Y  N  N  73.433  35.312  -0.244    3.656  -0.962  -0.524  N3   V1D  10  
V1D  N4   N2   N  0  1  Y  N  N  74.428  34.337   1.459    3.046   1.107  -0.659  N4   V1D  11  
V1D  C15  C9   C  0  1  Y  N  N  74.003  34.180   0.213    2.655  -0.120  -0.861  C15  V1D  12  
V1D  C5   C10  C  0  1  N  N  S  74.109  32.897  -0.567    1.302  -0.533  -1.382  C5   V1D  13  
V1D  N1   N3   N  0  1  N  N  N  75.423  32.327  -0.332    1.194  -1.994  -1.355  N1   V1D  14  
V1D  C    C11  C  0  1  N  N  N  76.448  32.397  -1.188    1.310  -2.657  -0.188  C    V1D  15  
V1D  C1   C12  C  0  1  N  N  N  77.708  31.734  -0.674    1.198  -4.160  -0.160  C1   V1D  16  
V1D  C4   C13  C  0  1  N  N  N  78.461  32.582   0.382    1.352  -4.766   1.246  C4   V1D  17  
V1D  N    N4   N  0  1  N  N  N  79.800  32.184  -0.299    2.797  -4.855   0.942  N    V1D  18  
V1D  C3   C14  C  0  1  N  N  N  80.556  31.130   0.439    3.353  -6.136   1.396  C3   V1D  19  
V1D  C2   C15  C  0  1  N  N  N  78.982  31.711  -1.555    2.510  -4.885  -0.509  C2   V1D  20  
V1D  O    O1   O  0  1  N  N  N  76.394  32.960  -2.279    1.503  -2.044   0.841  O    V1D  21  
V1D  C6   C16  C  0  1  N  N  N  73.029  31.898  -0.133    0.209   0.076  -0.502  C6   V1D  22  
V1D  C7   C17  C  0  1  N  N  N  71.615  32.183  -0.629   -1.163  -0.240  -1.101  C7   V1D  23  
V1D  C8   C18  C  0  1  N  N  N  70.591  31.173  -0.108   -2.256   0.369  -0.221  C8   V1D  24  
V1D  C9   C19  C  0  1  N  N  N  69.160  31.335  -0.648   -3.628   0.054  -0.820  C9   V1D  25  
V1D  C10  C20  C  0  1  N  N  N  68.175  30.441   0.113   -4.721   0.663   0.060  C10  V1D  26  
V1D  C11  C21  C  0  1  N  N  N  66.823  30.206  -0.545   -6.093   0.348  -0.539  C11  V1D  27  
V1D  O1   O2   O  0  1  N  N  N  66.189  31.426  -0.780   -6.177   0.901  -1.854  O1   V1D  28  
V1D  O2   O3   O  0  1  N  N  N  66.880  29.427  -1.709   -6.269  -1.069  -0.606  O2   V1D  29  
V1D  C12  C22  C  0  1  Y  N  N  65.966  29.490   0.547   -7.170   0.947   0.328  C12  V1D  30  
V1D  N2   N5   N  0  1  Y  N  N  65.356  28.353   0.381   -6.999   1.637   1.419  N2   V1D  31  
V1D  O3   O4   O  0  1  Y  N  N  64.708  28.059   1.607   -8.054   1.986   1.895  O3   V1D  32  
V1D  C14  C23  C  0  1  Y  N  N  64.962  29.053   2.470   -9.091   1.561   1.160  C14  V1D  33  
V1D  C13  C24  C  0  1  Y  N  N  65.735  29.979   1.881   -8.566   0.878   0.115  C13  V1D  34  
V1D  H1   H1   H  0  1  N  N  N  74.648  39.167   4.806    4.933   5.666   0.240  H1   V1D  35  
V1D  H2   H2   H  0  1  N  N  N  75.190  37.612   6.650    7.227   5.378   1.082  H2   V1D  36  
V1D  H3   H3   H  0  1  N  N  N  75.231  35.192   6.246    8.181   3.125   1.331  H3   V1D  37  
V1D  H4   H4   H  0  1  N  N  N  74.750  34.299   4.010    6.846   1.146   0.741  H4   V1D  38  
V1D  H5   H5   H  0  1  N  N  N  73.102  37.258   0.670    5.668  -0.555   0.242  H5   V1D  39  
V1D  H6   H6   H  0  1  N  N  N  73.041  35.438  -1.155    3.635  -1.930  -0.576  H6   V1D  40  
V1D  H8   H8   H  0  1  N  N  N  73.981  33.114  -1.638    1.184  -0.179  -2.406  H8   V1D  41  
V1D  H9   H9   H  0  1  N  N  N  75.573  31.847   0.533    1.039  -2.484  -2.178  H9   V1D  42  
V1D  H10  H10  H  0  1  N  N  N  77.493  30.730  -0.280    0.331  -4.531  -0.706  H10  V1D  43  
V1D  H11  H11  H  0  1  N  N  N  78.235  33.658   0.344    1.115  -4.072   2.053  H11  V1D  44  
V1D  H12  H12  H  0  1  N  N  N  78.353  32.220   1.415    0.866  -5.735   1.362  H12  V1D  45  
V1D  H14  H14  H  0  1  N  N  N  81.083  31.585   1.291    2.840  -6.954   0.891  H14  V1D  46  
V1D  H15  H15  H  0  1  N  N  N  79.855  30.366   0.807    4.417  -6.175   1.160  H15  V1D  47  
V1D  H16  H16  H  0  1  N  N  N  81.287  30.662  -0.237    3.217  -6.231   2.473  H16  V1D  48  
V1D  H17  H17  H  0  1  N  N  N  79.259  30.715  -1.931    2.365  -5.889  -0.907  H17  V1D  49  
V1D  H18  H18  H  0  1  N  N  N  78.972  32.428  -2.389    3.198  -4.285  -1.105  H18  V1D  50  
V1D  H19  H19  H  0  1  N  N  N  73.004  31.887   0.967    0.273  -0.347   0.501  H19  V1D  51  
V1D  H20  H20  H  0  1  N  N  N  73.322  30.904  -0.503    0.344   1.156  -0.450  H20  V1D  52  
V1D  H21  H21  H  0  1  N  N  N  71.320  33.188  -0.293   -1.227   0.183  -2.104  H21  V1D  53  
V1D  H22  H22  H  0  1  N  N  N  71.614  32.149  -1.728   -1.297  -1.320  -1.152  H22  V1D  54  
V1D  H23  H23  H  0  1  N  N  N  70.551  31.266   0.987   -2.192  -0.053   0.782  H23  V1D  55  
V1D  H24  H24  H  0  1  N  N  N  70.942  30.166  -0.378   -2.121   1.450  -0.169  H24  V1D  56  
V1D  H25  H25  H  0  1  N  N  N  68.851  32.385  -0.536   -3.692   0.476  -1.823  H25  V1D  57  
V1D  H26  H26  H  0  1  N  N  N  69.145  31.060  -1.713   -3.763  -1.026  -0.871  H26  V1D  58  
V1D  H27  H27  H  0  1  N  N  N  68.653  29.460   0.253   -4.657   0.241   1.063  H27  V1D  59  
V1D  H28  H28  H  0  1  N  N  N  67.993  30.904   1.094   -4.587   1.743   0.112  H28  V1D  60  
V1D  H29  H29  H  0  1  N  N  N  66.165  31.931   0.024   -6.066   1.861  -1.884  H29  V1D  61  
V1D  H30  H30  H  0  1  N  N  N  67.316  28.604  -1.519   -6.224  -1.512   0.252  H30  V1D  62  
V1D  H31  H31  H  0  1  N  N  N  64.599  29.101   3.486  -10.139   1.733   1.359  H31  V1D  63  
V1D  H32  H32  H  0  1  N  N  N  66.105  30.896   2.316   -9.092   0.391  -0.693  H32  V1D  64  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V1D  O    C    DOUB  N  N   1  
V1D  O2   C11  SING  N  N   2  
V1D  C2   C1   SING  N  N   3  
V1D  C2   N    SING  N  N   4  
V1D  C    C1   SING  N  N   5  
V1D  C    N1   SING  N  N   6  
V1D  O1   C11  SING  N  N   7  
V1D  C1   C4   SING  N  N   8  
V1D  C9   C8   SING  N  N   9  
V1D  C9   C10  SING  N  N  10  
V1D  C7   C6   SING  N  N  11  
V1D  C7   C8   SING  N  N  12  
V1D  C5   N1   SING  N  N  13  
V1D  C5   C6   SING  N  N  14  
V1D  C5   C15  SING  N  N  15  
V1D  C11  C10  SING  N  N  16  
V1D  C11  C12  SING  N  N  17  
V1D  N    C4   SING  N  N  18  
V1D  N    C3   SING  N  N  19  
V1D  N3   C15  SING  Y  N  20  
V1D  N3   C16  SING  Y  N  21  
V1D  C15  N4   DOUB  Y  N  22  
V1D  N2   C12  DOUB  Y  N  23  
V1D  N2   O3   SING  Y  N  24  
V1D  C12  C13  SING  Y  N  25  
V1D  C16  C17  DOUB  Y  N  26  
V1D  N4   C17  SING  Y  N  27  
V1D  O3   C14  SING  Y  N  28  
V1D  C17  C18  SING  N  N  29  
V1D  C13  C14  DOUB  Y  N  30  
V1D  F    C23  SING  N  N  31  
V1D  C18  C23  DOUB  Y  N  32  
V1D  C18  C19  SING  Y  N  33  
V1D  C23  C22  SING  Y  N  34  
V1D  C19  C20  DOUB  Y  N  35  
V1D  C22  C21  DOUB  Y  N  36  
V1D  C20  C21  SING  Y  N  37  
V1D  C22  H1   SING  N  N  38  
V1D  C21  H2   SING  N  N  39  
V1D  C20  H3   SING  N  N  40  
V1D  C19  H4   SING  N  N  41  
V1D  C16  H5   SING  N  N  42  
V1D  N3   H6   SING  N  N  43  
V1D  C5   H8   SING  N  N  44  
V1D  N1   H9   SING  N  N  45  
V1D  C1   H10  SING  N  N  46  
V1D  C4   H11  SING  N  N  47  
V1D  C4   H12  SING  N  N  48  
V1D  C3   H14  SING  N  N  49  
V1D  C3   H15  SING  N  N  50  
V1D  C3   H16  SING  N  N  51  
V1D  C2   H17  SING  N  N  52  
V1D  C2   H18  SING  N  N  53  
V1D  C6   H19  SING  N  N  54  
V1D  C6   H20  SING  N  N  55  
V1D  C7   H21  SING  N  N  56  
V1D  C7   H22  SING  N  N  57  
V1D  C8   H23  SING  N  N  58  
V1D  C8   H24  SING  N  N  59  
V1D  C9   H25  SING  N  N  60  
V1D  C9   H26  SING  N  N  61  
V1D  C10  H27  SING  N  N  62  
V1D  C10  H28  SING  N  N  63  
V1D  O1   H29  SING  N  N  64  
V1D  O2   H30  SING  N  N  65  
V1D  C14  H31  SING  N  N  66  
V1D  C13  H32  SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V1D  SMILES            ACDLabs               12.01  "Fc1ccccc1c2cnc(n2)C(NC(C3CN(C)C3)=O)CCCCCC(c4ccon4)(O)O"  
V1D  InChI             InChI                 1.03   "InChI=1S/C24H30FN5O4/c1-30-14-16(15-30)23(31)28-19(9-3-2-6-11-24(32,33)21-10-12-34-29-21)22-26-13-20(27-22)17-7-4-5-8-18(17)25/h4-5,7-8,10,12-13,16,19,32-33H,2-3,6,9,11,14-15H2,1H3,(H,26,27)(H,28,31)/t19-/m0/s1"  
V1D  InChIKey          InChI                 1.03   KTQGXHKWGKIKPU-IBGZPJMESA-N  
V1D  SMILES_CANONICAL  CACTVS                3.385  "CN1CC(C1)C(=O)N[C@@H](CCCCCC(O)(O)c2ccon2)c3[nH]cc(n3)c4ccccc4F"  
V1D  SMILES            CACTVS                3.385  "CN1CC(C1)C(=O)N[CH](CCCCCC(O)(O)c2ccon2)c3[nH]cc(n3)c4ccccc4F"  
V1D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN1CC(C1)C(=O)N[C@@H](CCCCCC(c2ccon2)(O)O)c3[nH]cc(n3)c4ccccc4F"  
V1D  SMILES            "OpenEye OEToolkits"  2.0.7  "CN1CC(C1)C(=O)NC(CCCCCC(c2ccon2)(O)O)c3[nH]cc(n3)c4ccccc4F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V1D  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(1S)-1-[4-(2-fluorophenyl)-1H-imidazol-2-yl]-7,7-dihydroxy-7-(1,2-oxazol-3-yl)heptyl]-1-methylazetidine-3-carboxamide"  
V1D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[(1~{S})-1-[4-(2-fluorophenyl)-1~{H}-imidazol-2-yl]-7-(1,2-oxazol-3-yl)-7,7-bis(oxidanyl)heptyl]-1-methyl-azetidine-3-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V1D  "Create component"  2020-06-12  RCSB  
V1D  "Initial release"   2020-07-29  RCSB  
##
